CX288876

Overview
NameCX288876
Unique NameCX288876
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length598
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14365 contig Ccv1_Contig14365:62..659. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: NTF6_TOBAC (Mitogen-activated protein kinase homolog NTF6 OS=Nicotiana tabacum GN=NTF6 PE=2 SV=1)

HSP 1 Score: 356.681 bits (914), Expect = 5.154e-98
Identity = 166/196 (84.69%), Postives = 183/196 (93.37%), Query Frame = 2
Query:   11 RGIPLYGGKYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAP 598
            +GIP + GKYV+YN+LGN F+V+SKY+PP+QP+GRGAYG+VC A NSETKEEVAIKKI NAF+NRIDAKR LREIKLL HM HENI+K+KDI+ P D+E+FNDVYIVYELMDTDLHQIIRS QALTDDHCQYFLYQLLRGLKY+HSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSE DFMTEYVVTRWYRAP
Sbjct:   12 KGIPTHEGKYVEYNVLGNFFEVTSKYIPPIQPVGRGAYGMVCCATNSETKEEVAIKKIGNAFENRIDAKRTLREIKLLSHMDHENIIKIKDIVRPPDREEFNDVYIVYELMDTDLHQIIRSSQALTDDHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEADFMTEYVVTRWYRAP 207          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: MPK13_ARATH (Mitogen-activated protein kinase 13 OS=Arabidopsis thaliana GN=MPK13 PE=1 SV=1)

HSP 1 Score: 338.961 bits (868), Expect = 1.112e-92
Identity = 157/198 (79.29%), Postives = 178/198 (89.90%), Query Frame = 2
Query:    5 KDRGIPLYGGKYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAP 598
            +D GI  Y G+YV YN+LGN+F++SSKY+PP++PIGRGAYGIVC A NSET EEVAIKKI NAFDNR+DAKR LREIKLL HM H+N++K+KDII   +KE+F DVYIVYELMDTDLHQIIRS Q LTDDHCQYFLYQ+LRGLKYIHSANVLHRDLKPSNL+LN NCDLKICDFGLART++ET+ MTEYVVTRWYRAP
Sbjct:    5 EDGGILTYDGRYVMYNVLGNIFELSSKYIPPIEPIGRGAYGIVCCATNSETNEEVAIKKIANAFDNRVDAKRTLREIKLLSHMDHDNVIKIKDIIELPEKERFEDVYIVYELMDTDLHQIIRSTQTLTDDHCQYFLYQILRGLKYIHSANVLHRDLKPSNLVLNTNCDLKICDFGLARTSNETEIMTEYVVTRWYRAP 202          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: MMK2_MEDSA (Mitogen-activated protein kinase homolog MMK2 OS=Medicago sativa GN=MMK2 PE=2 SV=1)

HSP 1 Score: 337.806 bits (865), Expect = 2.478e-92
Identity = 160/196 (81.63%), Postives = 178/196 (90.82%), Query Frame = 2
Query:   11 RGIPLYGGKYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAP 598
            RG+P +GG+Y+QYNI GNLF+VS KYVPP++ +GRGAYGIVC+AVN+ET+EEVAIKKI NAFDNRIDAKR LREIKLL HM HEN++ +KDII P  KE FN VYIV ELMDTDLHQIIRS Q +TDDHC+YF+YQLLRGLKY+HSANVLHRDLKPSNLLLNANCDLKI DFGLARTTSETDFMTEYVVTRWYRAP
Sbjct:   11 RGVPTHGGRYLQYNIYGNLFEVSRKYVPPIRSVGRGAYGIVCAAVNAETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENVMSIKDIIRPPQKENFNHVYIVSELMDTDLHQIIRSNQPMTDDHCRYFVYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAP 206          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: MPK4_ARATH (Mitogen-activated protein kinase 4 OS=Arabidopsis thaliana GN=MPK4 PE=1 SV=2)

HSP 1 Score: 336.265 bits (861), Expect = 7.209e-92
Identity = 161/196 (82.14%), Postives = 175/196 (89.29%), Query Frame = 2
Query:   11 RGIPLYGGKYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAP 598
            +G+  +GG YVQYN+ GNLF+VS KYVPPL+PIGRGAYGIVC+A NSET EEVAIKKI NAFDN IDAKR LREIKLL HM HEN++ VKDII P  +E FNDVYIVYELMDTDLHQIIRS Q LTDDHC++FLYQLLRGLKY+HSANVLHRDLKPSNLLLNANCDLK+ DFGLART SETDFMTEYVVTRWYRAP
Sbjct:   17 KGVATHGGSYVQYNVYGNLFEVSRKYVPPLRPIGRGAYGIVCAATNSETGEEVAIKKIGNAFDNIIDAKRTLREIKLLKHMDHENVIAVKDIIKPPQRENFNDVYIVYELMDTDLHQIIRSNQPLTDDHCRFFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKLGDFGLARTKSETDFMTEYVVTRWYRAP 212          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: MPK1_ORYSJ (Mitogen-activated protein kinase 1 OS=Oryza sativa subsp. japonica GN=MPK1 PE=1 SV=1)

HSP 1 Score: 335.109 bits (858), Expect = 1.606e-91
Identity = 156/191 (81.68%), Postives = 176/191 (92.15%), Query Frame = 2
Query:   26 YGGKYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAP 598
            +GG+++QYNI GN+F+V++KY PP+ PIG+GAYGIVCSA+NSET E+VAIKKI NAFDN+IDAKR LREIKLL HM HENIV ++DIIPP  +  FNDVYI YELMDTDLHQIIRS QAL+++HCQYFLYQ+LRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAP
Sbjct:   46 HGGRFIQYNIFGNVFEVTAKYKPPILPIGKGAYGIVCSALNSETGEQVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENIVAIRDIIPPPQRNSFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAP 236          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: NTF4_TOBAC (Mitogen-activated protein kinase homolog NTF4 OS=Nicotiana tabacum GN=NTF4 PE=2 SV=1)

HSP 1 Score: 334.339 bits (856), Expect = 2.739e-91
Identity = 155/191 (81.15%), Postives = 174/191 (91.10%), Query Frame = 2
Query:   26 YGGKYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAP 598
            +GG+++QYNI GN+F+V++KY PP+ PIG+GAYGIVCSA+NSET E VAIKKI NAFDN+IDAKR LREIKLL HM HENIV ++DIIPP  +E FNDVYI YELMDTDLHQIIRS Q L+++HCQYFLYQ+LRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR TSETDFMTEYVVTRWYRAP
Sbjct:   39 HGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENIVAIRDIIPPPQREAFNDVYIAYELMDTDLHQIIRSNQGLSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAP 229          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: MMK1_MEDSA (Mitogen-activated protein kinase homolog MMK1 OS=Medicago sativa GN=MMK1 PE=1 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 7.970e-91
Identity = 153/191 (80.10%), Postives = 174/191 (91.10%), Query Frame = 2
Query:   26 YGGKYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAP 598
            +GG+++QYNI GN+F+V++KY PP+ PIG+GAYGIVCSA NSET E VA+KKI NAFDN+IDAKR LREIKLL HM HEN+V ++DI+PP  +E FNDVYI YELMDTDLHQIIRS QAL+++HCQYFLYQ+LRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR TSETDFMTEYVVTRWYRAP
Sbjct:   34 HGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSAHNSETNEHVAVKKIANAFDNKIDAKRTLREIKLLRHMDHENVVAIRDIVPPPQREVFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAP 224          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: MAPK_PEA (Mitogen-activated protein kinase homolog D5 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 331.257 bits (848), Expect = 2.319e-90
Identity = 152/191 (79.58%), Postives = 174/191 (91.10%), Query Frame = 2
Query:   26 YGGKYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAP 598
            +GG+++QYNI GN+F+V++KY PP+ PIG+GAYGIVCSA NSET E VA+KKI NAFDN+IDAKR LREIKL+ HM HEN+V ++DI+PP  +E FNDVYI YELMDTDLHQIIRS QAL+++HCQYFLYQ+LRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR TSETDFMTEYVVTRWYRAP
Sbjct:   41 HGGRFIQYNIFGNIFEVTAKYRPPIMPIGKGAYGIVCSAHNSETNEHVAVKKIANAFDNKIDAKRTLREIKLVRHMDHENVVAIRDIVPPPQREVFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSETDFMTEYVVTRWYRAP 231          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: MPK6_ARATH (Mitogen-activated protein kinase 6 OS=Arabidopsis thaliana GN=MPK6 PE=1 SV=1)

HSP 1 Score: 330.872 bits (847), Expect = 3.029e-90
Identity = 154/191 (80.63%), Postives = 174/191 (91.10%), Query Frame = 2
Query:   26 YGGKYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAP 598
            +GG+++QYNI GN+F+V++KY PP+ PIG+GAYGIVCSA+NSET E VAIKKI NAFDN+IDAKR LREIKLL HM HENIV ++DIIPP  +  FNDVYI YELMDTDLHQIIRS QAL+++HCQYFLYQ+LRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR TSE+DFMTEYVVTRWYRAP
Sbjct:   42 HGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSAMNSETNESVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENIVAIRDIIPPPLRNAFNDVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARVTSESDFMTEYVVTRWYRAP 232          
BLAST of CX288876 vs. ExPASy Swiss-Prot
Match: MPK6_ORYSJ (Mitogen-activated protein kinase 6 OS=Oryza sativa subsp. japonica GN=MPK6 PE=2 SV=1)

HSP 1 Score: 328.561 bits (841), Expect = 1.503e-89
Identity = 157/196 (80.10%), Postives = 172/196 (87.76%), Query Frame = 2
Query:   11 RGIPLYGGKYVQYNILGNLFQVSSKYVPPLQPIGRGAYGIVCSAVNSETKEEVAIKKITNAFDNRIDAKRILREIKLLCHMTHENIVKVKDIIPPMDKEKFNDVYIVYELMDTDLHQIIRSKQALTDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSETDFMTEYVVTRWYRAP 598
            +G+  +GG+YV YN+ GN F+VSSKY PP++PIGRGAYGIVC+AVNSE  EEVAIKKI NAFDN IDAKR LREIKLL HM HENI+ +KDII P  ++ FNDVYIV ELMDTDLHQIIRS Q LTDDHCQYFLYQLLRGLKY+HSANVLHRDLKPSNL LNANCDLKI DFGLARTT+ETD MTEYVVTRWYRAP
Sbjct:   17 KGMGTHGGRYVLYNVYGNFFEVSSKYAPPIRPIGRGAYGIVCAAVNSENGEEVAIKKIGNAFDNHIDAKRTLREIKLLRHMDHENIIAIKDIIRPPRRDNFNDVYIVSELMDTDLHQIIRSNQPLTDDHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLFLNANCDLKIADFGLARTTTETDLMTEYVVTRWYRAP 212          
The following BLAST results are available for this feature:
BLAST of CX288876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NTF6_TOBAC5.154e-9884.69Mitogen-activated protein kinase homolog NTF6 OS=N... [more]
MPK13_ARATH1.112e-9279.29Mitogen-activated protein kinase 13 OS=Arabidopsis... [more]
MMK2_MEDSA2.478e-9281.63Mitogen-activated protein kinase homolog MMK2 OS=M... [more]
MPK4_ARATH7.209e-9282.14Mitogen-activated protein kinase 4 OS=Arabidopsis ... [more]
MPK1_ORYSJ1.606e-9181.68Mitogen-activated protein kinase 1 OS=Oryza sativa... [more]
NTF4_TOBAC2.739e-9181.15Mitogen-activated protein kinase homolog NTF4 OS=N... [more]
MMK1_MEDSA7.970e-9180.10Mitogen-activated protein kinase homolog MMK1 OS=M... [more]
MAPK_PEA2.319e-9079.58Mitogen-activated protein kinase homolog D5 OS=Pis... [more]
MPK6_ARATH3.029e-9080.63Mitogen-activated protein kinase 6 OS=Arabidopsis ... [more]
MPK6_ORYSJ1.503e-8980.10Mitogen-activated protein kinase 6 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionC02006D09SK IF1 Citrus clementina cDNA clone C02006D09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288876 ID=CX288876; Name=CX288876; organism=Citrus clementina; type=EST; length=598bp
GATGAAAGACAGAGGGATTCCACTGTACGGTGGCAAATACGTACAGTACA
ATATTCTAGGAAACCTCTTTCAGGTCTCCTCTAAGTATGTTCCTCCTCTT
CAGCCTATTGGTCGCGGCGCATACGGCATCGTTTGTAGTGCTGTAAATTC
AGAGACAAAAGAAGAGGTTGCAATAAAGAAAATTACGAATGCATTCGATA
ACAGGATTGATGCCAAGAGGATCCTCCGTGAGATCAAACTCCTCTGTCAC
ATGACTCATGAGAATATTGTCAAGGTGAAGGACATAATACCACCGATGGA
TAAGGAAAAGTTCAATGACGTTTATATTGTATATGAGTTGATGGATACTG
ATCTGCATCAGATAATACGCTCCAAACAGGCTCTGACTGATGATCATTGT
CAGTATTTCCTATACCAATTGCTGCGGGGACTGAAGTACATACACTCTGC
TAATGTTTTGCACCGAGATTTAAAACCAAGCAACCTGCTGCTCAATGCAA
ACTGTGATCTTAAGATTTGTGACTTTGGACTAGCAAGAACCACTTCAGAG
ACAGATTTCATGACGGAGTATGTTGTAACCCGATGGTATCGAGCCCCT
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