CX288902
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288902 vs. ExPASy Swiss-Prot
Match: DGDG2_SOYBN (Digalactosyldiacylglycerol synthase 2, chloroplastic OS=Glycine max GN=DGD2 PE=2 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 1.718e-59 Identity = 110/162 (67.90%), Postives = 135/162 (83.33%), Query Frame = 3 Query: 3 DQIQRAAKKLKLVVRVYPGRDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPSNDFFKQFPNCRTYDGRNGFVEATLKALAEEPAQPTDAQTHQLSWESATERFLQVAELVGDVVTKRSKSPSRHLESESLNSKRIIEDAFGYLHYVASGFE 488 D++Q+AA+KL+L VRV+P RDHAD +FHDYK+FLNPSTTDVVCT TAEALAMGKIVVCANHPSNDFFKQFPNC TYD +GFV+ TLKALAE+PAQPTDAQ H LSWE+AT+RFL+ A+L + K S++ S L + SLN + +++A Y+H+VASGFE Sbjct: 272 DEVQKAAEKLELAVRVHPARDHADALFHDYKLFLNPSTTDVVCTTTAEALAMGKIVVCANHPSNDFFKQFPNCWTYDDDDGFVKLTLKALAEQPAQPTDAQRHDLSWEAATKRFLKAADLDKPLERKLSRTTSNFL-AASLNLQEKVDEASAYVHHVASGFE 432
BLAST of CX288902 vs. ExPASy Swiss-Prot
Match: DGDG2_LOTJA (Digalactosyldiacylglycerol synthase 2, chloroplastic OS=Lotus japonicus GN=DGD2 PE=2 SV=1) HSP 1 Score: 223.016 bits (567), Expect = 5.526e-58 Identity = 110/162 (67.90%), Postives = 132/162 (81.48%), Query Frame = 3 Query: 3 DQIQRAAKKLKLVVRVYPGRDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPSNDFFKQFPNCRTYDGRNGFVEATLKALAEEPAQPTDAQTHQLSWESATERFLQVAELVGDVVTKRSKSPSRHLESESLNSKRIIEDAFGYLHYVASGFE 488 D++Q+AAKKL++ VRV+P RDHAD +FHDYK+FLNPSTTDVVCT TAEALAMGKIVVCANH SN+FFKQFPNC T+D GFV+ LKALAEEPAQ TDAQ H LSWE+ATERFL+ AEL K S+S S ++ S SLN ++ ++DA Y+H+VASGFE Sbjct: 272 DEVQKAAKKLEMAVRVHPARDHADALFHDYKLFLNPSTTDVVCTTTAEALAMGKIVVCANHCSNEFFKQFPNCWTFDESKGFVQLILKALAEEPAQLTDAQRHDLSWEAATERFLKAAELDKPFEKKLSRSTSIYM-STSLNLQQTVDDASAYVHHVASGFE 432
BLAST of CX288902 vs. ExPASy Swiss-Prot
Match: DGDG2_ARATH (Digalactosyldiacylglycerol synthase 2, chloroplastic OS=Arabidopsis thaliana GN=DGD2 PE=2 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 5.352e-53 Identity = 100/162 (61.73%), Postives = 124/162 (76.54%), Query Frame = 3 Query: 3 DQIQRAAKKLKLVVRVYPGRDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPSNDFFKQFPNCRTYDGRNGFVEATLKALAEEPAQPTDAQTHQLSWESATERFLQVAELVGDVVTKRSKSPSRHLESESLNSKRIIEDAFGYLHYVASGFE 488 ++I+ AA+KL L V VYPGRDHAD +FH+YKVFLNPSTTDVVCT TAEALAMGKIVVCANH SN FFKQFPNCRTYD GFV ATLKAL E+P+Q T+ Q H+LSWE+AT+RF++V++L + S S S++ + +ED Y+H++ASGFE Sbjct: 274 EEIKEAARKLDLTVNVYPGRDHADSLFHNYKVFLNPSTTDVVCTTTAEALAMGKIVVCANHISNKFFKQFPNCRTYDDGQGFVRATLKALGEQPSQLTEQQRHELSWEAATQRFIKVSDLNRLSRADSNLSKRSVFASSSISVGKNLEDMSAYIHFLASGFE 435
BLAST of CX288902 vs. ExPASy Swiss-Prot
Match: DGDG1_ARATH (Digalactosyldiacylglycerol synthase 1, chloroplastic OS=Arabidopsis thaliana GN=DGD1 PE=1 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 5.377e-37 Identity = 75/160 (46.88%), Postives = 104/160 (65.00%), Query Frame = 3 Query: 6 QIQRAAKKLKLVVRVYPGRDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPSNDFFKQFPNCRTYDGRNGFVEATLKALAEEPAQPTDAQTHQLSWESATERFLQVAELVGDVVTKRSKSPSRHLESESLNS-KRIIEDAFGYLHYVASG 482 ++QRAAKK L + GRDHAD H YKVF+NPS +DV+CTATAEALAMGK VVCA+HPSN+FF+ FPNC TY FV +A+ +EP T Q + LSWE+AT+RF++ ++L D + + + +S S+ S +++ + HYV +G Sbjct: 612 EVQRAAKKHDLNLNFLKGRDHADDALHKYKVFINPSISDVLCTATAEALAMGKFVVCADHPSNEFFRSFPNCLTYKTSEDFVSKVQEAMTKEPLPLTPEQMYNLSWEAATQRFMEYSDL--DKILNNGEGGRKMRKSRSVPSFNEVVDGGLAFSHYVLTG 769
BLAST of CX288902 vs. ExPASy Swiss-Prot
Match: DGDG1_SOYBN (Digalactosyldiacylglycerol synthase 1, chloroplastic OS=Glycine max GN=DGD1 PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 2.043e-36 Identity = 76/170 (44.71%), Postives = 105/170 (61.76%), Query Frame = 3 Query: 3 DQIQRAAKKLKLVVRVYPGRDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPSNDFFKQFPNCRTYDGRNGFVEATLKALAEEPAQPTDAQTHQLSWESATERFLQVAELVGDVVTKRSKSPSRHLESESL--------NSKRIIEDAFGYLHYVASGFE 488 +++Q AA++L L + GRDHAD H YKVF+NPS +DV+CTATAEALAMGK VVCA+HPSN+FF+ FPNC TY FV +AL EP T Q +QLSWE+AT+RF++ +EL G ++ K + ++ L N +++ + HY +G E Sbjct: 578 NEVQSAARRLDLNLNFQKGRDHADDSLHRYKVFINPSISDVLCTATAEALAMGKFVVCADHPSNEFFRSFPNCLTYRTSEDFVTKVKEALENEPYPLTPEQRYQLSWEAATQRFMEYSELDG-ILNKENNGEKSRVDKGKLIAKSASMPNLTELVDGGLAFAHYCLTGNE 746
BLAST of CX288902 vs. ExPASy Swiss-Prot
Match: DGDG1_LOTJA (Digalactosyldiacylglycerol synthase 1, chloroplastic OS=Lotus japonicus GN=DGD1 PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 1.324e-35 Identity = 79/171 (46.20%), Postives = 108/171 (63.16%), Query Frame = 3 Query: 3 DQIQRAAKKLKLVVRVYPGRDHADPIFHDYKVFLNPSTTDVVCTATAEALAMGKIVVCANHPSNDFFKQFPNCRTYDGRNGFVEATLKALAEEPAQPTDAQTHQLSWESATERFLQVAELVGDVVTKRSK---SPSRH-----LESESL-NSKRIIEDAFGYLHYVASGFE 488 +++Q AA++ L + GRDHAD H YKVF+NPS +DV+CTATAEALAMGK VVCA+HPSN+FF+ FPNC TY F +ALA EP T Q +QLSWE+AT+RF++ +EL D V + K PS++ +S S+ N +++ + HY +G E Sbjct: 581 NEVQSAARRFDLNLNFQKGRDHADDSLHRYKVFINPSISDVLCTATAEALAMGKFVVCADHPSNEFFRSFPNCLTYKTPEDFAVKVKEALANEPYPLTPEQRYQLSWEAATQRFMEYSEL--DKVLNKEKDGAKPSKNNRKIMAKSASMPNLTELVDGGLAFAHYCLTGNE 749 The following BLAST results are available for this feature:
BLAST of CX288902 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288902 ID=CX288902; Name=CX288902; organism=Citrus clementina; type=EST; length=489bpback to top |