CX288920
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288920 vs. ExPASy Swiss-Prot
Match: CHID_SOLLC (Basic endochitinase (Fragment) OS=Solanum lycopersicum GN=CHI14 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 6.082e-16 Identity = 45/114 (39.47%), Postives = 58/114 (50.88%), Query Frame = 2 Query: 242 NETISDYFQVYQFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPG 583 ++ IS FE RN A GF+ Y++FITAT + FGTTG + KEI AFLA +T+ G+ A GP +WG CYN E YC S + +PC PG Sbjct: 2 SQNISSLISKNLFERILVHRNDRACGAKGFYTYEAFITATKTFA--AFGTTGDTNTRNKEIAAFLAQTSHETTGGWATAPDGPYSWGYCYNREQGSPGDYCASSQQ--WPCAPG 111
BLAST of CX288920 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3) HSP 1 Score: 82.4185 bits (202), Expect = 1.770e-15 Identity = 39/103 (37.86%), Postives = 55/103 (53.40%), Query Frame = 2 Query: 275 QFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPG 583 QF++ RN A GF+ Y +FITA + GFGTTG + KE+ AF +T+ G+ A GP +WG C+ E +P+ YC+ S T+PC G Sbjct: 94 QFDDMLKHRNDAACPARGFYTYNAFITAAKSFP--GFGTTGDTATRKKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPASDYCEPS--ATWPCASG 192
BLAST of CX288920 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.147e-14 Identity = 39/103 (37.86%), Postives = 54/103 (52.43%), Query Frame = 2 Query: 275 QFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPG 583 QF++ RN A GF+ Y +FI A + GFGTTG + KEI AF +T+ G+ A GP +WG C+ E +PS +YC S + +PC G Sbjct: 79 QFDDMLKHRNDNACPARGFYTYDAFINAAKSFP--GFGTTGDTATRKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPSSNYCSPSAE--WPCASG 177
BLAST of CX288920 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.957e-14 Identity = 39/102 (38.24%), Postives = 55/102 (53.92%), Query Frame = 2 Query: 278 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPG 583 F+ RN P A GF+ Y +F+ A + FGTTG+ + +E+ AFL +T+ G+ A GP AWG C+ E +PS +YC S + YPC PG Sbjct: 11 FDQMLKHRNNPACPAKGFYTYDAFLAAAKSFP--SFGTTGSTDVRKRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERNPSSNYCAPSPR--YPCAPG 108
BLAST of CX288920 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.555e-14 Identity = 38/102 (37.25%), Postives = 57/102 (55.88%), Query Frame = 2 Query: 278 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPG 583 + + F ++ A GF+ Y SF+ A ++ F TG + +E+ AFLA + +T+ G+ A GP AWGLCY E++P SYCD + K +PC PG Sbjct: 58 YASLFLHKDDAACPARGFYTYASFVRAATRFPR--FAATGCADARKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSSYCDATDK-QWPCYPG 156
BLAST of CX288920 vs. ExPASy Swiss-Prot
Match: CHI2_HORVU (26 kDa endochitinase 2 OS=Hordeum vulgare PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.693e-14 Identity = 39/112 (34.82%), Postives = 56/112 (50.00%), Query Frame = 2 Query: 248 TISDYFQVYQFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPG 583 ++S QF+ RN A GF+ Y +F+ A + GFGTTG+ + +E+ AFLA +T+ G+ A G AWG C+ E S YC S + +PC PG Sbjct: 24 SVSSIVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFP--GFGTTGSADAQKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGASSDYCTPSAQ--WPCAPG 131
BLAST of CX288920 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 7.435e-14 Identity = 42/103 (40.78%), Postives = 53/103 (51.46%), Query Frame = 2 Query: 278 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYG-VATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPG 583 F RN A GF+ Y +FI A + F TTG + + +EI AFLA +T+ G G A GP AWG CYN E++P SYC + YPC PG Sbjct: 61 FNQMLLHRNDGACPARGFYTYDAFIAAARSFP--AFATTGDQATRKREIAAFLAQTSHETTGGAGWAAPDGPYAWGYCYNRELNPPSSYC--ASDPNYPCAPG 159
BLAST of CX288920 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 7.435e-14 Identity = 42/103 (40.78%), Postives = 53/103 (51.46%), Query Frame = 2 Query: 278 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYG-VATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPG 583 F RN A GF+ Y +FI A + F TTG + + +EI AFLA +T+ G G A GP AWG CYN E++P SYC + YPC PG Sbjct: 83 FNQMLLHRNDGACPARGFYTYDAFIAAARSFP--AFATTGDQATRKREIAAFLAQTSHETTGGAGWAAPDGPYAWGYCYNRELNPPSSYC--ASDPNYPCAPG 181
BLAST of CX288920 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.819e-13 Identity = 39/124 (31.45%), Postives = 55/124 (44.35%), Query Frame = 2 Query: 215 CPTWSKFCCNETISD----YFQVYQFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPC 574 C +CC +S +F FE RN GF+ Y ++ AT Y GFG TG + +E+ AF A +TS + P WG C +E++P+ YCD K +YPC Sbjct: 47 CGLTVAYCCAGCVSQCRNCFFTESMFEQMLPNRNNDSCPGKGFYTYDAYFVATEFYP--GFGMTGDDDTRKRELAAFFAQTSQETSGRSIIGEDAPFTWGYCLVNELNPNSDYCDPKTKSSYPC 168
BLAST of CX288920 vs. ExPASy Swiss-Prot
Match: CHIA_SECCE (Basic endochitinase A OS=Secale cereale GN=rsca PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.294e-13 Identity = 36/102 (35.29%), Postives = 53/102 (51.96%), Query Frame = 2 Query: 278 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPG 583 F+ RN A GF+ Y +F+ A + GFGTTG+ + +E+ AFLA +T+ G+ A G AWG C+ E + +YC S + +PC PG Sbjct: 89 FDRMLLHRNDGACQAKGFYTYDAFVAAAGAFP--GFGTTGSTDTRKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGATSNYCTPSAQ--WPCAPG 186 The following BLAST results are available for this feature:
BLAST of CX288920 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288920 ID=CX288920; Name=CX288920; organism=Citrus clementina; type=EST; length=585bpback to top |