CX288986
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288986 vs. ExPASy Swiss-Prot
Match: SNX2_MOUSE (Sorting nexin-2 OS=Mus musculus GN=Snx2 PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 1.551e-12 Identity = 46/180 (25.56%), Postives = 88/180 (48.89%), Query Frame = 3 Query: 9 YEKLKHYIFELENHLAEAQKHAYRLVKRHRELGESLSDFGKAAKLLGACEGD-ALGKAFSELGMKSEALSVKLQREAHQLLMNFEEPLKDYVRAVQSIKATIAERANAFRQQCELAETM-KLKEINLDKLMLTRSDKVGEAEIEYKELKAESEDSTRRFETIVRLMNEEIVRFQEQKTLD 542 +E+ + L+ L + LV +EL + + F K+A +LG E AL +A S+L E + Q +A F E L DY+R + ++K R +++ + T+ K +E ++ + DK+ +A+ E +E +A+ + R FE I + + +E+ RF++++ D Sbjct: 306 FEEKQQQFENLDQQLRKLHASVEALVCHRKELSANTAAFAKSAAMLGNSEDHTALSRALSQLAEVEEKIDQLHQEQAFADFYMFSELLSDYIRLIAAVKGVFDHRMKCWQKWEDAQITLLKKRETEAKMMVANKPDKIQQAKNEIREWEAKVQQGERDFEQISKTIRKEVGRFEKERVKD 485
BLAST of CX288986 vs. ExPASy Swiss-Prot
Match: SNX2_HUMAN (Sorting nexin-2 OS=Homo sapiens GN=SNX2 PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 2.025e-12 Identity = 46/180 (25.56%), Postives = 88/180 (48.89%), Query Frame = 3 Query: 9 YEKLKHYIFELENHLAEAQKHAYRLVKRHRELGESLSDFGKAAKLLGACEGD-ALGKAFSELGMKSEALSVKLQREAHQLLMNFEEPLKDYVRAVQSIKATIAERANAFRQQCELAETM-KLKEINLDKLMLTRSDKVGEAEIEYKELKAESEDSTRRFETIVRLMNEEIVRFQEQKTLD 542 +E+ + L+ L + LV +EL + + F K+A +LG E AL +A S+L E + Q +A F E L DY+R + ++K R +++ + T+ K +E ++ + DK+ +A+ E +E +A+ + R FE I + + +E+ RF++++ D Sbjct: 306 FEEKQQQFENLDQQLRKLHVSVEALVCHRKELSANTAAFAKSAAMLGNSEDHTALSRALSQLAEVEEKIDQLHQEQAFADFYMFSELLSDYIRLIAAVKGVFDHRMKCWQKWEDAQITLLKKREAEAKMMVANKPDKIQQAKNEIREWEAKVQQGERDFEQISKTIRKEVGRFEKERVKD 485
BLAST of CX288986 vs. ExPASy Swiss-Prot
Match: SNX2_BOVIN (Sorting nexin-2 OS=Bos taurus GN=SNX2 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.893e-12 Identity = 45/180 (25.00%), Postives = 87/180 (48.33%), Query Frame = 3 Query: 9 YEKLKHYIFELENHLAEAQKHAYRLVKRHRELGESLSDFGKAAKLLGACEGD-ALGKAFSELGMKSEALSVKLQREAHQLLMNFEEPLKDYVRAVQSIKATIAERANAFRQQCELAETM-KLKEINLDKLMLTRSDKVGEAEIEYKELKAESEDSTRRFETIVRLMNEEIVRFQEQKTLD 542 +E+ + + L + LV +EL + + F K+A +LG E AL +A S+L E + Q +A F E L DY+R + ++K R +++ + T+ K +E ++ + DK+ +A+ E +E +A+ + R FE I + + +E+ RF++++ D Sbjct: 306 FEEKQQQFENQDQQLRKLHASVEALVCHRKELSANTAAFAKSAAMLGNSEDHTALSRALSQLAEVEEKIDQLHQEQAFADFYMFSELLSDYIRLIAAVKGVFDHRVKCWQKWEDAQITLLKKRETEAKMMVANKPDKIQQAKNEIREWEAKVQQGERDFEQISKTIRKEVGRFEKERVKD 485
BLAST of CX288986 vs. ExPASy Swiss-Prot
Match: SNX1_PONAB (Sorting nexin-1 OS=Pongo abelii GN=SNX1 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.820e-11 Identity = 50/179 (27.93%), Postives = 86/179 (48.04%), Query Frame = 3 Query: 12 EKLKHYIFELENHLAEAQKHAYRLVKRHRELGESLSDFGKAAKLLGACEGD-ALGKAFSELGMKSEALSVKLQREAHQLLMNFEEPLKDYVRAVQSIKATIAERANAF-RQQCELAETMKLKEINLDKLMLTRSDKVGEAEIEYKELKAESEDSTRRFETIVRLMNEEIVRFQEQKTLD 542 EKL+ E E L + LV +EL + + F K+ +LG+ E + AL +A S+L E + Q +A+ E L DY+R + ++A +R + R Q A K +E L + DK+ +A+ E E ++ R FE I ++ +E++RF+++K+ D Sbjct: 311 EKLQEVECE-EQRLRKLHAVVETLVNHRKELALNTAQFAKSLAMLGSSEDNTALSRALSQLAEVEEKIEQLHQEQANNDFFLLAELLSDYIRLLAIVRAAFDQRMKTWQRWQDAQATLQKKREAEARLLWANKPDKLQQAKDEILEWESRVTQYERDFERISTVVRKEVIRFEKEKSKD 488
BLAST of CX288986 vs. ExPASy Swiss-Prot
Match: SNX1_HUMAN (Sorting nexin-1 OS=Homo sapiens GN=SNX1 PE=1 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 3.820e-11 Identity = 50/179 (27.93%), Postives = 86/179 (48.04%), Query Frame = 3 Query: 12 EKLKHYIFELENHLAEAQKHAYRLVKRHRELGESLSDFGKAAKLLGACEGD-ALGKAFSELGMKSEALSVKLQREAHQLLMNFEEPLKDYVRAVQSIKATIAERANAF-RQQCELAETMKLKEINLDKLMLTRSDKVGEAEIEYKELKAESEDSTRRFETIVRLMNEEIVRFQEQKTLD 542 EKL+ E E L + LV +EL + + F K+ +LG+ E + AL +A S+L E + Q +A+ E L DY+R + ++A +R + R Q A K +E L + DK+ +A+ E E ++ R FE I ++ +E++RF+++K+ D Sbjct: 311 EKLQEVECE-EQRLRKLHAVVETLVNHRKELALNTAQFAKSLAMLGSSEDNTALSRALSQLAEVEEKIEQLHQEQANNDFFLLAELLSDYIRLLAIVRAAFDQRMKTWQRWQDAQATLQKKREAEARLLWANKPDKLQQAKDEILEWESRVTQYERDFERISTVVRKEVIRFEKEKSKD 488
BLAST of CX288986 vs. ExPASy Swiss-Prot
Match: SNX1_BOVIN (Sorting nexin-1 OS=Bos taurus GN=SNX1 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 4.989e-11 Identity = 48/179 (26.82%), Postives = 88/179 (49.16%), Query Frame = 3 Query: 12 EKLKHYIFELENHLAEAQKHAYRLVKRHRELGESLSDFGKAAKLLGACEGD-ALGKAFSELGMKSEALSVKLQREAHQLLMNFEEPLKDYVRAVQSIKATIAERANAFRQQCELAETM-KLKEINLDKLMLTRSDKVGEAEIEYKELKAESEDSTRRFETIVRLMNEEIVRFQEQKTLD 542 EKL+ E E L + LV +EL + + F K+ +LG+ E + AL +A S+L E + Q +A+ E L DY+R + ++A +R +++ + T+ K +E L + DK+ +A+ E E ++ R FE I ++ +E++RF+++K+ D Sbjct: 311 EKLQEVECE-EQRLRKLHAVVETLVNHRKELALNTAQFAKSLAMLGSSEDNTALSRALSQLAEVEEKIEQLHQEQANNDFFLLAELLSDYIRLLAIVRAAFDQRMKTWQRWQDAQTTLQKKREAEARLLWANKPDKLQQAKDEIVEWESRVTQYERDFERISTVVRKEVIRFEKEKSRD 488
BLAST of CX288986 vs. ExPASy Swiss-Prot
Match: SNX1_MACFA (Sorting nexin-1 OS=Macaca fascicularis GN=SNX1 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 6.516e-11 Identity = 50/179 (27.93%), Postives = 86/179 (48.04%), Query Frame = 3 Query: 12 EKLKHYIFELENHLAEAQKHAYRLVKRHRELGESLSDFGKAAKLLGACEGD-ALGKAFSELGMKSEALSVKLQREAHQLLMNFEEPLKDYVRAVQSIKATIAERANAF-RQQCELAETMKLKEINLDKLMLTRSDKVGEAEIEYKELKAESEDSTRRFETIVRLMNEEIVRFQEQKTLD 542 EKL+ E E L + LV +EL + + F K+ +LG+ E + AL +A S+L E + Q +A+ E L DY+R + ++A +R + R Q A K +E L + DK+ +A+ E E ++ R FE I ++ +E++RF+++K+ D Sbjct: 311 EKLQEVECE-EQRLRKLHAVVETLVNHRKELALNTAQFAKSLAMLGSSEDNTALSRALSQLAEVEEKIEQLHQEQANNDFFLLAELLSDYIRLLAIVRAAFDQRMKTWQRWQDAQATLQKKREAEARLLWANKPDKLQQAKDEILEWESRVTQYERDFERISTVVRKEVMRFEKEKSKD 488
BLAST of CX288986 vs. ExPASy Swiss-Prot
Match: SNX2_PONAB (Sorting nexin-2 OS=Pongo abelii GN=SNX2 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 8.510e-11 Identity = 46/184 (25.00%), Postives = 88/184 (47.83%), Query Frame = 3 Query: 9 YEKLKHYIFELENHLAEAQKHAYRLVKRHRELGESLSDFGKAAKLLGACEGD-ALGKAFSELGMKSEALSVKLQREAHQLLMNFEEPLKDYVRAVQSIKATIAERANAFRQQCELAET-MKLKEINLDKLMLTRSDKVGEAEIEYK----ELKAESEDSTRRFETIVRLMNEEIVRFQEQKTLD 542 +E+ + L+ L + LV +EL + + F K+A +LG E AL +A S+L E + Q +A F E L DY+R + ++K R +++ + T +K +E ++ + DK+ +A+ E + E +A+ + R FE I + + +E+ RF++++ D Sbjct: 306 FEEKQQQFENLDQQLRKLHASVEALVCHRKELSANTAAFAKSAAMLGNSEDHTALSRALSQLAEVEEKIDQLHQEQAFADFYMFSELLSDYIRLIAAVKGVFDHRMKCWQKWEDAQITLLKKREAEAKMMVANKPDKIQQAKNEIREEIEEWEAKVQQGERDFEQISKTIRKEVGRFEKERVKD 489
BLAST of CX288986 vs. ExPASy Swiss-Prot
Match: SNX2_MACFA (Sorting nexin-2 OS=Macaca fascicularis GN=SNX2 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 8.510e-11 Identity = 46/184 (25.00%), Postives = 88/184 (47.83%), Query Frame = 3 Query: 9 YEKLKHYIFELENHLAEAQKHAYRLVKRHRELGESLSDFGKAAKLLGACEGD-ALGKAFSELGMKSEALSVKLQREAHQLLMNFEEPLKDYVRAVQSIKATIAERANAFRQQCELAET-MKLKEINLDKLMLTRSDKVGEAEIEYK----ELKAESEDSTRRFETIVRLMNEEIVRFQEQKTLD 542 +E+ + L+ L + LV +EL + + F K+A +LG E AL +A S+L E + Q +A F E L DY+R + ++K R +++ + T +K +E ++ + DK+ +A+ E + E +A+ + R FE I + + +E+ RF++++ D Sbjct: 306 FEEKQQQFENLDQQLRKLHASVEALVCHRKELSANTAAFAKSAAMLGNSEDHTALSRALSQLAEVEEKIDQLHQEQAFADFYMFSELLSDYIRLIAAVKGVFDHRMKCWQKWEDAQITLLKKREAEAKMMVANKPDKIQQAKNEIREEIEEWEAKVQQGERDFEQISKTIRKEVGRFEKERVKD 489 The following BLAST results are available for this feature:
BLAST of CX288986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288986 ID=CX288986; Name=CX288986; organism=Citrus clementina; type=EST; length=542bpback to top |