CX288998
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288998 vs. ExPASy Swiss-Prot
Match: TRPA_ANAVT (Tryptophan synthase alpha chain OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=trpA PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.052e-20 Identity = 47/82 (57.32%), Postives = 58/82 (70.73%), Query Frame = 2 Query: 5 ALKLLDSCGSDIIELSVPYSDPLTDGPDMQAAATRS*ARGTNWNAILSMLKEEVPQMLCPMASFTYYKPILRRGVDNFMSTV 250 ALK+LDS G+DIIEL +PYSDPL DGP +QAAATR+ GT ++L MLK P + P+ FTYY IL RG+DNF+ V Sbjct: 36 ALKILDSNGADIIELGIPYSDPLADGPVIQAAATRALQNGTKLESVLEMLKVTTPSLQAPIVLFTYYNSILHRGIDNFLEQV 117
BLAST of CX288998 vs. ExPASy Swiss-Prot
Match: TRPA_TRIEI (Tryptophan synthase alpha chain OS=Trichodesmium erythraeum (strain IMS101) GN=trpA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.421e-19 Identity = 44/86 (51.16%), Postives = 63/86 (73.26%), Query Frame = 2 Query: 2 EALKLLDSCGSDIIELSVPYSDPLTDGPDMQAAATRS*ARGTNWNAILSMLKEEVPQMLCPMASFTYYKPILRRGVDNFMSTV*DI 259 +AL++LD G+++IEL VPYSDPL DGP +QAAATRS RGT ++L +++ P++ P+ FTYY PIL RGV+NF+ + D+ Sbjct: 36 KALEVLDRSGANMIELGVPYSDPLADGPVIQAAATRSLNRGTTLESVLEVVQTVSPKLRSPIILFTYYNPILYRGVENFLKKIYDV 121
BLAST of CX288998 vs. ExPASy Swiss-Prot
Match: TRPA_CYAP4 (Tryptophan synthase alpha chain OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=trpA PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.774e-19 Identity = 43/83 (51.81%), Postives = 58/83 (69.88%), Query Frame = 2 Query: 2 EALKLLDSCGSDIIELSVPYSDPLTDGPDMQAAATRS*ARGTNWNAILSMLKEEVPQMLCPMASFTYYKPILRRGVDNFMSTV 250 +AL++LD G+D+IEL VPYSDPL DGP +QAAATR+ +GT +A+L M+ P + P+ FTYY PI RGV+ F+ V Sbjct: 35 KALQVLDQQGADLIELGVPYSDPLADGPTIQAAATRALQKGTRLDAVLEMISHVAPNLRSPLILFTYYNPIFHRGVEPFLQQV 117
BLAST of CX288998 vs. ExPASy Swiss-Prot
Match: TRPA_CYAP8 (Tryptophan synthase alpha chain OS=Cyanothece sp. (strain PCC 8801) GN=trpA PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.541e-19 Identity = 44/83 (53.01%), Postives = 59/83 (71.08%), Query Frame = 2 Query: 2 EALKLLDSCGSDIIELSVPYSDPLTDGPDMQAAATRS*ARGTNWNAILSMLKEEVPQMLCPMASFTYYKPILRRGVDNFMSTV 250 +AL+LLD+ G+D+IEL VPYSDPL DGP +QAAATR+ RG +L ++KE P++ P+ FTYY PI RGV+ F+ V Sbjct: 35 KALRLLDASGADLIELGVPYSDPLADGPVIQAAATRALGRGVKLEDVLGVVKEVSPEIKAPIILFTYYNPIFYRGVEAFLQQV 117
BLAST of CX288998 vs. ExPASy Swiss-Prot
Match: TRPA_SYNP2 (Tryptophan synthase alpha chain OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=trpA PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 9.848e-19 Identity = 43/83 (51.81%), Postives = 59/83 (71.08%), Query Frame = 2 Query: 2 EALKLLDSCGSDIIELSVPYSDPLTDGPDMQAAATRS*ARGTNWNAILSMLKEEVPQMLCPMASFTYYKPILRRGVDNFMSTV 250 +ALK+LD+ G+D IEL VPYSDPL DGP +QAAATR+ +RG +L++++ Q+ P+ FTYY PI RG+D FM+ V Sbjct: 35 QALKILDAAGADFIELGVPYSDPLADGPTIQAAATRALSRGVTLEQVLAIVQRVHGQLTAPIILFTYYNPIFYRGIDAFMAQV 117
BLAST of CX288998 vs. ExPASy Swiss-Prot
Match: TRPA_ACAM1 (Tryptophan synthase alpha chain OS=Acaryochloris marina (strain MBIC 11017) GN=trpA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.742e-18 Identity = 43/82 (52.44%), Postives = 57/82 (69.51%), Query Frame = 2 Query: 5 ALKLLDSCGSDIIELSVPYSDPLTDGPDMQAAATRS*ARGTNWNAILSMLKEEVPQMLCPMASFTYYKPILRRGVDNFMSTV 250 AL+ LD+ G+D+IEL VPYSDPL DGP +QAAATR+ RGT + +L M+ E P++ P+ FTYY PI RGV F+ + Sbjct: 36 ALRQLDASGADLIELGVPYSDPLADGPVIQAAATRALQRGTRLDQVLEMVTELSPEIRAPIILFTYYNPIYHRGVAEFLQQI 117
BLAST of CX288998 vs. ExPASy Swiss-Prot
Match: TRPA_MAIZE (Indole-3-glycerol phosphate lyase, chloroplastic OS=Zea mays GN=BX1 PE=1 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 4.888e-18 Identity = 40/76 (52.63%), Postives = 55/76 (72.37%), Query Frame = 2 Query: 2 EALKLLDSCGSDIIELSVPYSDPLTDGPDMQAAATRS*ARGTNWNAILSMLKEEVPQMLCPMASFTYYKPILRRGV 229 EAL+LLD CG+D+IEL VP SDP DGP +QA+ R+ A GT +A+L ML+E P++ CP+ +YYKPI+ R + Sbjct: 121 EALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPELSCPVVLLSYYKPIMSRSL 196
BLAST of CX288998 vs. ExPASy Swiss-Prot
Match: TRPA_THEEB (Tryptophan synthase alpha chain OS=Thermosynechococcus elongatus (strain BP-1) GN=trpA PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.384e-18 Identity = 43/82 (52.44%), Postives = 56/82 (68.29%), Query Frame = 2 Query: 5 ALKLLDSCGSDIIELSVPYSDPLTDGPDMQAAATRS*ARGTNWNAILSMLKEEVPQMLCPMASFTYYKPILRRGVDNFMSTV 250 ALK+LD G+D+IEL +PYSDPL DGP +QAAATR+ RGT A+L M + Q+ P+ F+YY PI RGV +F+ V Sbjct: 38 ALKILDDHGADLIELGMPYSDPLADGPVIQAAATRALQRGTRLEAVLEMTTDLHQQLTAPLILFSYYNPIYHRGVSSFLKAV 119
BLAST of CX288998 vs. ExPASy Swiss-Prot
Match: TRPA_PORYE (Tryptophan synthase alpha chain OS=Porphyra yezoensis GN=trpA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.404e-17 Identity = 41/83 (49.40%), Postives = 58/83 (69.88%), Query Frame = 2 Query: 2 EALKLLDSCGSDIIELSVPYSDPLTDGPDMQAAATRS*ARGTNWNAILSMLKEEVPQMLCPMASFTYYKPILRRGVDNFMSTV 250 +AL++LDS G+DIIEL +PYSDPL DGP +Q A+ R+ +G N N ILSM+K + P+ FTYY P+L G++NF+ + Sbjct: 33 KALQILDSYGADIIELGLPYSDPLADGPIIQEASNRALKQGINLNKILSMVKTVNMTIKAPIVLFTYYNPVLHLGINNFIYAI 115
BLAST of CX288998 vs. ExPASy Swiss-Prot
Match: TRPA_PORPU (Tryptophan synthase alpha chain OS=Porphyra purpurea GN=trpA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.404e-17 Identity = 40/83 (48.19%), Postives = 58/83 (69.88%), Query Frame = 2 Query: 2 EALKLLDSCGSDIIELSVPYSDPLTDGPDMQAAATRS*ARGTNWNAILSMLKEEVPQMLCPMASFTYYKPILRRGVDNFMSTV 250 +ALK+LD G+DIIEL +PYSDPL DGP +QAA++R+ + N N IL M+ ++ P+ FTYY P+L G++NF+S + Sbjct: 43 KALKILDQHGADIIELGLPYSDPLADGPIIQAASSRALKQSINLNNILDMVNITSSNIVAPIVLFTYYNPVLNLGINNFISAI 125 The following BLAST results are available for this feature:
BLAST of CX288998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288998 ID=CX288998; Name=CX288998; organism=Citrus clementina; type=EST; length=267bpback to top |