CX289054
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX289054 vs. ExPASy Swiss-Prot
Match: PYRC_ARATH (Dihydroorotase, mitochondrial OS=Arabidopsis thaliana GN=PYR4 PE=2 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 3.511e-64 Identity = 105/134 (78.36%), Postives = 126/134 (94.03%), Query Frame = 1 Query: 73 SHYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDKTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQ 474 S++ RAIVMPNLKPP+T+TAAA+ YR+ I+KALP+ S+F PLMTLYLTDKT P+EI+LAR++GVV+AVKLYPAGATTNSQDGVTDLFGKC+ VLEEMV+QNMPLLVHGEVTDP +D+FDREK+FI+T+LQPLIQ Sbjct: 62 SNFKRAIVMPNLKPPVTSTAAAIIYRKFIMKALPSESSFDPLMTLYLTDKTLPEEIRLARESGVVYAVKLYPAGATTNSQDGVTDLFGKCLPVLEEMVKQNMPLLVHGEVTDPSIDVFDREKIFIETVLQPLIQ 195 HSP 2 Score: 42.3578 bits (98), Expect = 3.511e-64 Identity = 16/21 (76.19%), Postives = 19/21 (90.48%), Query Frame = 2 Query: 5 KGIIMELTLTQPDDWHLHLRD 67 + + MELT+TQPDDWHLHLRD Sbjct: 29 RAVRMELTITQPDDWHLHLRD 49
BLAST of CX289054 vs. ExPASy Swiss-Prot
Match: PYRC_RALSO (Dihydroorotase OS=Ralstonia solanacearum GN=pyrC PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 3.966e-50 Identity = 91/130 (70.00%), Postives = 104/130 (80.00%), Query Frame = 1 Query: 79 YGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDKTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPL 468 +GRAI+MPNLKPP+TTTA A AYRE IL ALPA + F PLMTLYLTD T+P+E++ AR +G V VKLYPAGATTNS GVTDL +C LE M + MPLLVHGEVTDP VDIFDRE VFIDT++QPL Sbjct: 34 FGRAIIMPNLKPPVTTTAQARAYRERILAALPAGTRFEPLMTLYLTDNTTPEEVRAARASGFVHGVKLYPAGATTNSDAGVTDL-RRCAKTLEAMQDVGMPLLVHGEVTDPTVDIFDREAVFIDTVMQPL 162 HSP 2 Score: 34.6538 bits (78), Expect = 3.966e-50 Identity = 13/19 (68.42%), Postives = 16/19 (84.21%), Query Frame = 2 Query: 11 IIMELTLTQPDDWHLHLRD 67 +I LT+ +PDDWHLHLRD Sbjct: 1 MIDTLTIVRPDDWHLHLRD 19
BLAST of CX289054 vs. ExPASy Swiss-Prot
Match: PYRC_RALPJ (Dihydroorotase OS=Ralstonia pickettii (strain 12J) GN=pyrC PE=3 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 7.316e-49 Identity = 91/130 (70.00%), Postives = 102/130 (78.46%), Query Frame = 1 Query: 79 YGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDKTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPL 468 +GRAI+MPNLKPP+TTTA A AYRE IL ALPA + F PLMTLYLTD TSP+ I+ AR +G + VKLYPAGATTNS GVTDL +C LE M E MPLLVHGEVTDP VDIFDRE VFIDT++ PL Sbjct: 34 FGRAIIMPNLKPPVTTTAQARAYRERILAALPAGTQFEPLMTLYLTDNTSPEVIREARASGFIHGVKLYPAGATTNSDAGVTDL-RRCAKTLEAMQEVGMPLLVHGEVTDPTVDIFDREAVFIDTVMLPL 162 HSP 2 Score: 34.2686 bits (77), Expect = 7.316e-49 Identity = 12/15 (80.00%), Postives = 14/15 (93.33%), Query Frame = 2 Query: 23 LTLTQPDDWHLHLRD 67 LT+ +PDDWHLHLRD Sbjct: 5 LTIVRPDDWHLHLRD 19
BLAST of CX289054 vs. ExPASy Swiss-Prot
Match: PYRC_METFK (Dihydroorotase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=pyrC PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 7.171e-46 Identity = 83/132 (62.88%), Postives = 103/132 (78.03%), Query Frame = 1 Query: 79 YGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDKTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQ 474 +GRAIVMPNL+PP+TTTA A AYRE I++A+PA S F PLMTLYLTD TS +EI A+ +G+V VKLYPAGATTNS GVT++ G CV LE M + +PLLVH EVTD VD+FDRE+VFI+ + PL++ Sbjct: 34 FGRAIVMPNLRPPVTTTALAYAYRERIMQAMPAGSGFEPLMTLYLTDNTSAEEIDRAKASGIVHGVKLYPAGATTNSDSGVTNI-GHCVKALEAMEKHGIPLLVHAEVTDVDVDVFDRERVFIERNMVPLLE 164 HSP 2 Score: 35.4242 bits (80), Expect = 7.171e-46 Identity = 12/15 (80.00%), Postives = 15/15 (100.00%), Query Frame = 2 Query: 23 LTLTQPDDWHLHLRD 67 +T+T+PDDWHLHLRD Sbjct: 5 ITITRPDDWHLHLRD 19
BLAST of CX289054 vs. ExPASy Swiss-Prot
Match: PYRC_NITEU (Dihydroorotase OS=Nitrosomonas europaea GN=pyrC PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 9.345e-46 Identity = 85/134 (63.43%), Postives = 102/134 (76.12%), Query Frame = 1 Query: 79 YGRAIVMPNLKPPITTTAAAVAYRESILKALPA--SSNFTPLMTLYLTDKTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQ 474 + RAI+MPNLKPPI TT A AYR IL ALPA + F PLMTLYLTD TSP+EI A+ +G+V +KLYPAGATT+S GVTD+ +C LE+M E +MPLLVHGEV DP VD+FDREK+FID +L PL+Q Sbjct: 37 FARAIIMPNLKPPIVTTEQAAAYRVRILSALPAELAGRFEPLMTLYLTDTTSPEEITRAQASGIVQGIKLYPAGATTHSDAGVTDI-ARCEATLEKMEELDMPLLVHGEVVDPAVDVFDREKIFIDRVLTPLLQ 169 HSP 2 Score: 35.8094 bits (81), Expect = 9.345e-46 Identity = 13/16 (81.25%), Postives = 15/16 (93.75%), Query Frame = 2 Query: 20 ELTLTQPDDWHLHLRD 67 +LT T+PDDWHLHLRD Sbjct: 7 KLTFTRPDDWHLHLRD 22
BLAST of CX289054 vs. ExPASy Swiss-Prot
Match: PYRC_CUPTR (Dihydroorotase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=pyrC PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.587e-45 Identity = 84/130 (64.62%), Postives = 95/130 (73.08%), Query Frame = 1 Query: 79 YGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDKTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPL 468 + RAIVMPNLKPP+TT A A AYR IL ALPA F PLMTLYLTD T P+EI AR +G V VKLYPAGATTNS GVTD+ +C LE M +PLLVHGEVTDP +DIFDRE VFI+ ++ PL Sbjct: 34 FARAIVMPNLKPPVTTVAQAQAYRARILAALPAGMQFEPLMTLYLTDNTGPEEIAAARASGFVHGVKLYPAGATTNSDAGVTDI-RRCYPALEAMQRAGLPLLVHGEVTDPAIDIFDREAVFIERVMTPL 162 HSP 2 Score: 36.5798 bits (83), Expect = 1.587e-45 Identity = 13/16 (81.25%), Postives = 16/16 (100.00%), Query Frame = 2 Query: 20 ELTLTQPDDWHLHLRD 67 +LT+T+PDDWHLHLRD Sbjct: 4 KLTITRPDDWHLHLRD 19
BLAST of CX289054 vs. ExPASy Swiss-Prot
Match: PYRC_ALHEH (Dihydroorotase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=pyrC PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 2.696e-45 Identity = 85/132 (64.39%), Postives = 97/132 (73.48%), Query Frame = 1 Query: 79 YGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDKTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQ 474 +GRAI+MPNLKPP+TT A AYRE IL ALPA ++F PLMTLYLTD T P EI+ A +G V AVKLYPAGATTNS GVTDL +C L M E+ +PL VHGEVT VDIFDRE FID +L PL+Q Sbjct: 33 FGRAIIMPNLKPPVTTVDQAAAYRERILAALPAGAHFEPLMTLYLTDNTPPAEIEKAAASGFVHAVKLYPAGATTNSDAGVTDL-ARCEETLAAMAERGLPLCVHGEVTRDEVDIFDREAHFIDEVLDPLVQ 163 HSP 2 Score: 36.5798 bits (83), Expect = 2.696e-45 Identity = 13/18 (72.22%), Postives = 16/18 (88.89%), Query Frame = 2 Query: 14 IMELTLTQPDDWHLHLRD 67 + +TLT+PDDWHLHLRD Sbjct: 1 MQRITLTRPDDWHLHLRD 18
BLAST of CX289054 vs. ExPASy Swiss-Prot
Match: PYRC_AGRT5 (Dihydroorotase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=pyrC PE=3 SV=2) HSP 1 Score: 166.777 bits (421), Expect = 3.513e-45 Identity = 83/133 (62.41%), Postives = 100/133 (75.19%), Query Frame = 1 Query: 76 HYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDKTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQ 474 H+ RAI+MPNL PP+ TTA A AYRE ILKA+P F PLMTLYLT+ T D+++ +K+G++ AVKLYPAGATTNS GV D F K + VLE M + +PL VHGEVT P VDIFDREK FIDT+L+PL Q Sbjct: 32 HFARAIIMPNLVPPVVTTADASAYRERILKAIPEGDRFEPLMTLYLTEDTVADDVEEGKKSGLITAVKLYPAGATTNSHGGVRD-FNKAMPVLERMAKIGLPLCVHGEVTTPDVDIFDREKAFIDTVLEPLRQ 163 HSP 2 Score: 34.6538 bits (78), Expect = 3.513e-45 Identity = 13/15 (86.67%), Postives = 14/15 (93.33%), Query Frame = 2 Query: 23 LTLTQPDDWHLHLRD 67 LTL +PDDWHLHLRD Sbjct: 4 LTLRRPDDWHLHLRD 18
BLAST of CX289054 vs. ExPASy Swiss-Prot
Match: PYRC_AGRRK (Dihydroorotase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=pyrC PE=3 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 3.513e-45 Identity = 83/133 (62.41%), Postives = 101/133 (75.94%), Query Frame = 1 Query: 76 HYGRAIVMPNLKPPITTTAAAVAYRESILKALPASSNFTPLMTLYLTDKTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLIQ 474 H+ RAI+MPNL PP+ TTA A AYRE ILKALPA F PLMTLYLT+ T+PD+++ +K+G++ AVKLYPAGATTNS GV +L K + LE M + +PL VHGEVT P VDIFDRE VFI+T+L PL Q Sbjct: 32 HFARAIIMPNLVPPVVTTADATAYRERILKALPAGDRFQPLMTLYLTEHTNPDDVEEGKKSGLITAVKLYPAGATTNSHGGVRNL-DKAMPTLERMAKIGLPLCVHGEVTTPEVDIFDREAVFIETVLDPLRQ 163 HSP 2 Score: 34.6538 bits (78), Expect = 3.513e-45 Identity = 12/18 (66.67%), Postives = 16/18 (88.89%), Query Frame = 2 Query: 14 IMELTLTQPDDWHLHLRD 67 + +LT+ +PDDWHLHLRD Sbjct: 1 MQKLTIRRPDDWHLHLRD 18
BLAST of CX289054 vs. ExPASy Swiss-Prot
Match: PYRC_LARHH (Dihydroorotase OS=Laribacter hongkongensis (strain HLHK9) GN=pyrC PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.013e-44 Identity = 85/132 (64.39%), Postives = 96/132 (72.73%), Query Frame = 1 Query: 79 YGRAIVMPNLKPPITTTAAAVAYRESILKALPASSN-FTPLMTLYLTDKTSPDEIKLARKTGVVFAVKLYPAGATTNSQDGVTDLFGKCVHVLEEMVEQNMPLLVHGEVTDPIVDIFDREKVFIDTILQPLI 471 + RAIVMPNLKPP+TT A AYRE IL ALP F PLMTLYLTD T P EI ++G V A+KLYPAGATTNS GVT L G C+ L M E +PLLVHGEVTDP +D+FDRE VFIDT+LQPL+ Sbjct: 33 FARAIVMPNLKPPVTTVVQAAAYRERILAALPPGGPAFEPLMTLYLTDNTPPAEIDRVAESGFVHALKLYPAGATTNSDAGVTSLSG-CLPTLTRMAELGVPLLVHGEVTDPQIDVFDREAVFIDTVLQPLL 163 HSP 2 Score: 36.965 bits (84), Expect = 1.013e-44 Identity = 14/15 (93.33%), Postives = 15/15 (100.00%), Query Frame = 2 Query: 23 LTLTQPDDWHLHLRD 67 LTLT+PDDWHLHLRD Sbjct: 4 LTLTRPDDWHLHLRD 18 The following BLAST results are available for this feature:
BLAST of CX289054 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 196
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289054 ID=CX289054; Name=CX289054; organism=Citrus clementina; type=EST; length=474bpback to top |