CX289113

Overview
NameCX289113
Unique NameCX289113
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length403
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289113 vs. ExPASy Swiss-Prot
Match: ADH1_SOLTU (Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=ADH1 PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 2.253e-55
Identity = 99/120 (82.50%), Postives = 113/120 (94.17%), Query Frame = 1
Query:    1 MTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISMED 360
            MT+GGVDRSVECTG+ID MISAFECVHDGWGVAVLVGVP K+AVF T P+N+LNERTLKGTFFGNYKPR+D+PSVV+ YMNK+LELEKFITH +PF+EINKAF+ M+KGEGLRCII+MED
Sbjct:  261 MTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKEAVFKTHPMNLLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGLRCIITMED 380          
BLAST of CX289113 vs. ExPASy Swiss-Prot
Match: ADH_FRAAN (Alcohol dehydrogenase OS=Fragaria ananassa GN=ADH PE=3 SV=2)

HSP 1 Score: 213.386 bits (542), Expect = 2.943e-55
Identity = 96/120 (80.00%), Postives = 112/120 (93.33%), Query Frame = 1
Query:    1 MTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISMED 360
            +TNGGVDRS+ECTGNI  MI AFECVHDGWGVAVLVGVP KDAVF T P+N LNERTLKGTFFGNYKPRTD+PSVV+ YMNK+LE++KFITH++PFS+INKAF+YM+KGEG+RCII+ME+
Sbjct:  261 LTNGGVDRSIECTGNIQAMIPAFECVHDGWGVAVLVGVPHKDAVFTTHPMNFLNERTLKGTFFGNYKPRTDIPSVVEKYMNKELEVDKFITHQLPFSQINKAFDYMLKGEGIRCIITMEE 380          
BLAST of CX289113 vs. ExPASy Swiss-Prot
Match: ADH3_SOLTU (Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=ADH3 PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 3.843e-55
Identity = 99/120 (82.50%), Postives = 112/120 (93.33%), Query Frame = 1
Query:    1 MTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISMED 360
            MT+GGVDRSVECTG+ID MISAFECVHDGWGVAVLVGVP K+AVF T P+N LNERTLKGTFFGNYKPR+D+PSVV+ YMNK+LELEKFITH +PF+EINKAF+ M+KGEGLRCII+MED
Sbjct:  261 MTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKEAVFKTHPMNFLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGLRCIITMED 380          
BLAST of CX289113 vs. ExPASy Swiss-Prot
Match: ADH2_SOLTU (Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=ADH2 PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 3.843e-55
Identity = 99/120 (82.50%), Postives = 112/120 (93.33%), Query Frame = 1
Query:    1 MTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISMED 360
            MT+GGVDRSVECTG+ID MISAFECVHDGWGVAVLVGVP K+AVF T P+N LNERTLKGTFFGNYKPR+D+PSVV+ YMNK+LELEKFITH +PF+EINKAF+ M+KGEGLRCII+MED
Sbjct:  261 MTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKEAVFKTHPMNFLNERTLKGTFFGNYKPRSDIPSVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGLRCIITMED 380          
BLAST of CX289113 vs. ExPASy Swiss-Prot
Match: ADH_MALDO (Alcohol dehydrogenase OS=Malus domestica GN=ADH PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 6.555e-55
Identity = 98/120 (81.67%), Postives = 110/120 (91.67%), Query Frame = 1
Query:    1 MTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISMED 360
            +TN GVDRS+ECTG+ + MISAFECVHDGWGVAVLVGVP KDAVF T P+N LNERTLKGTFFGNYK RTD+PSVV+ YMNK+LELEKFITH++PFSEINKAFEYM+KGEGLRCII ME+
Sbjct:  261 LTNRGVDRSIECTGSTEAMISAFECVHDGWGVAVLVGVPHKDAVFKTHPVNFLNERTLKGTFFGNYKTRTDIPSVVEKYMNKELELEKFITHKVPFSEINKAFEYMLKGEGLRCIIRMEE 380          
BLAST of CX289113 vs. ExPASy Swiss-Prot
Match: ADH2_SOLLC (Alcohol dehydrogenase 2 OS=Solanum lycopersicum GN=ADH2 PE=2 SV=2)

HSP 1 Score: 209.149 bits (531), Expect = 5.549e-54
Identity = 97/120 (80.83%), Postives = 110/120 (91.67%), Query Frame = 1
Query:    1 MTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISMED 360
            MT+GGVDRSVECTG+ID MISAFECVHDGWGVAVLVGVP K+AVF T P+N LNERTLKGTFFGNYKPR+D+P VV+ YMNK+LELEKFITH +PF+EINKAF+ M+KGEGLRCII+M D
Sbjct:  261 MTDGGVDRSVECTGHIDAMISAFECVHDGWGVAVLVGVPHKEAVFKTHPLNFLNERTLKGTFFGNYKPRSDIPCVVEKYMNKELELEKFITHTLPFAEINKAFDLMLKGEGLRCIITMAD 380          
BLAST of CX289113 vs. ExPASy Swiss-Prot
Match: ADH1_PETHY (Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1 PE=3 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 7.248e-54
Identity = 94/119 (78.99%), Postives = 111/119 (93.28%), Query Frame = 1
Query:    1 MTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISME 357
            MT+GGVDRSVECTGN++ MISAFECVHDGWGVAVLVGVP+KD  F T P+N+LNERTLKGTFFGNYKP++D+PSVVD YM K+LELEKFITH++PFSEINKAF+YM+KGE +RC+I+ME
Sbjct:  263 MTDGGVDRSVECTGNVNAMISAFECVHDGWGVAVLVGVPNKDDAFKTHPMNLLNERTLKGTFFGNYKPKSDIPSVVDKYMKKELELEKFITHQVPFSEINKAFDYMLKGESIRCMITME 381          
BLAST of CX289113 vs. ExPASy Swiss-Prot
Match: ADH1_MAIZE (Alcohol dehydrogenase 1 OS=Zea mays GN=ADH1 PE=2 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 1.236e-53
Identity = 96/120 (80.00%), Postives = 108/120 (90.00%), Query Frame = 1
Query:    1 MTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISMED 360
            MTNGGVDRSVECTGNI+ MI AFECVHDGWGVAVLVGVP KDA F T P+N LNERTLKGTFFGNYKPRTDLP+VV++YM K+LE+EKFITH +PF+EINKAF+ M KGEG+RCII ME+
Sbjct:  260 MTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNYKPRTDLPNVVELYMKKELEVEKFITHSVPFAEINKAFDLMAKGEGIRCIIRMEN 379          
BLAST of CX289113 vs. ExPASy Swiss-Prot
Match: ADH1_PENAM (Alcohol dehydrogenase 1 OS=Pennisetum americanum GN=ADH1 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 1.615e-53
Identity = 96/120 (80.00%), Postives = 108/120 (90.00%), Query Frame = 1
Query:    1 MTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISMED 360
            MTNGGVDRSVECTGNI+ MI AFECVHDGWGVAVLVGVP KDA F T P+N LNERTLKGTFFGN+KPRTDLP+VV++YM K+LE+EKFITH +PFSEINKAF+ M KGEG+RCII ME+
Sbjct:  260 MTNGGVDRSVECTGNINAMIQAFECVHDGWGVAVLVGVPHKDAEFKTHPMNFLNERTLKGTFFGNFKPRTDLPNVVELYMKKELEVEKFITHSVPFSEINKAFDLMAKGEGIRCIIRMEN 379          
BLAST of CX289113 vs. ExPASy Swiss-Prot
Match: ADH1_PEA (Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 6.136e-53
Identity = 95/120 (79.17%), Postives = 107/120 (89.17%), Query Frame = 1
Query:    1 MTNGGVDRSVECTGNIDNMISAFECVHDGWGVAVLVGVPSKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPSVVDMYMNKQLELEKFITHRIPFSEINKAFEYMVKGEGLRCIISMED 360
            MTNGGVDR+VECTG+I  MISAFECVHDGWGVAVLVGVPSKD  F T P+N LNERTLKGTF+GNYKPRTDLP+VV+ YM  +LELEKFITH +PFSEINKAF+YM+KGE +RCII ME+
Sbjct:  261 MTNGGVDRAVECTGSIQAMISAFECVHDGWGVAVLVGVPSKDDAFKTHPMNFLNERTLKGTFYGNYKPRTDLPNVVEKYMKGELELEKFITHTVPFSEINKAFDYMLKGESIRCIIKMEE 380          
The following BLAST results are available for this feature:
BLAST of CX289113 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
ADH1_SOLTU2.253e-5582.50Alcohol dehydrogenase 1 OS=Solanum tuberosum GN=AD... [more]
ADH_FRAAN2.943e-5580.00Alcohol dehydrogenase OS=Fragaria ananassa GN=ADH ... [more]
ADH3_SOLTU3.843e-5582.50Alcohol dehydrogenase 3 OS=Solanum tuberosum GN=AD... [more]
ADH2_SOLTU3.843e-5582.50Alcohol dehydrogenase 2 OS=Solanum tuberosum GN=AD... [more]
ADH_MALDO6.555e-5581.67Alcohol dehydrogenase OS=Malus domestica GN=ADH PE... [more]
ADH2_SOLLC5.549e-5480.83Alcohol dehydrogenase 2 OS=Solanum lycopersicum GN... [more]
ADH1_PETHY7.248e-5478.99Alcohol dehydrogenase 1 OS=Petunia hybrida GN=ADH1... [more]
ADH1_MAIZE1.236e-5380.00Alcohol dehydrogenase 1 OS=Zea mays GN=ADH1 PE=2 S... [more]
ADH1_PENAM1.615e-5380.00Alcohol dehydrogenase 1 OS=Pennisetum americanum G... [more]
ADH1_PEA6.136e-5379.17Alcohol dehydrogenase 1 OS=Pisum sativum PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC02009C07SK IF1 Citrus clementina cDNA clone C02009C07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289113 ID=CX289113; Name=CX289113; organism=Citrus clementina; type=EST; length=403bp
ATGACGAACGGTGGAGTTGACAGAAGTGTGGAGTGCACCGGCAACATTGA
TAACATGATCTCAGCCTTCGAGTGTGTTCATGATGGATGGGGTGTAGCTG
TGCTCGTTGGAGTGCCCAGTAAGGATGCAGTGTTCATGACCAAGCCAATC
AATGTACTTAACGAAAGAACCCTCAAAGGAACTTTCTTCGGGAACTACAA
ACCGCGGACTGATCTGCCCTCTGTCGTTGATATGTACATGAACAAGCAAC
TGGAACTAGAGAAGTTTATAACCCATCGCATCCCTTTCTCGGAAATCAAT
AAAGCCTTCGAGTACATGGTGAAAGGGGAGGGTTTGAGGTGCATTATCAG
CATGGAAGACTAGGAGTGAAAAAGGGAAAGAATAATCAAGTAAATAACAA
TAG
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