CX289175
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289175 vs. ExPASy Swiss-Prot
Match: HS23M_ARATH (23.6 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.6 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 1.678e-26 Identity = 74/152 (48.68%), Postives = 89/152 (58.55%), Query Frame = 3 Query: 69 MASSLALKRLVSFNLIPRALRCTVAPSATSASRFFNTNAVRQYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRSLSQVLNFMDQMTESPFFSGTRG----GLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEG 512 MAS+LALKRL+S ++ PR+ R + P+ +S R FNTNAVR Y TRS+SQVLN MDQ E+P S TRG G RRGWD KE DDAL L IDMPGL +EDV+++LEQ+TLVIRGEG Sbjct: 1 MASALALKRLLSSSIAPRS-RSVLRPAVSS--RLFNTNAVRSYDDDGENGDGVDLYRRSVPRRRGDFFSDVFDPFSP--TRSVSQVLNLMDQFMENPLLSATRGMGASGARRGWDIKEKDDALYLRIDMPGLSREDVKLALEQDTLVIRGEG 147
BLAST of CX289175 vs. ExPASy Swiss-Prot
Match: HS235_ARATH (23.5 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP23.5 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 1.678e-26 Identity = 76/153 (49.67%), Postives = 92/153 (60.13%), Query Frame = 3 Query: 72 ASSLALKRLVSFNLI--PRALRCTVAPSATSASRFFNTNAVRQYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRSLSQVLNFMDQMTESPFFSGTRG----GLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEG 512 +S+LAL+RL+S + + PRALR V P A S SR FNTNA R Y TRSLSQ+LNFMDQ++E P S TRG G+RRGW+ KE DDAL+L IDMPGL +EDV+++LEQNTLVIRGEG Sbjct: 4 SSALALRRLLSSSTVAVPRALRA-VRPVAAS-SRLFNTNAARNYEDGVDRNHHSNRHVSRHGGDFFSHILDPFTP-----TRSLSQMLNFMDQVSEIPLVSATRGMGASGVRRGWNVKEKDDALHLRIDMPGLSREDVKLALEQNTLVIRGEG 149
BLAST of CX289175 vs. ExPASy Swiss-Prot
Match: HS22M_PEA (Heat shock 22 kDa protein, mitochondrial OS=Pisum sativum GN=HSP22 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.052e-24 Identity = 69/149 (46.31%), Postives = 86/149 (57.72%), Query Frame = 3 Query: 69 MASSLALKRLVSFNLIPRALRCTVAPSATSASRFFNTNAVRQYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRSLSQVLNFMDQMTESPFFSGTRGGLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEGG 515 MASSLALKR +S L+ + + P A+SASR FNTNA+RQY RSLSQVLN +D +T++P S RRGWDA+ET+DAL L +DMPGLGKEDV++S+EQNTL I+GE G Sbjct: 1 MASSLALKRFLSSGLLSSSF---LRPVASSASRSFNTNAMRQYDQHSDDRNVDVYRHSFPRTRRDDLLLSDVFDPFSPP-RSLSQVLNMVDLLTDNPVLSAAS---RRGWDARETEDALFLRLDMPGLGKEDVKISVEQNTLTIKGEEG 142
BLAST of CX289175 vs. ExPASy Swiss-Prot
Match: HS22M_SOYBN (Heat shock 22 kDa protein, mitochondrial OS=Glycine max GN=HSP23.9 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 4.875e-20 Identity = 30/41 (73.17%), Postives = 39/41 (95.12%), Query Frame = 3 Query: 390 RGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEG 512 RGWDA+ET+DAL+L +DMPGL KEDV++S+EQNTL+I+GEG Sbjct: 112 RGWDARETEDALHLRVDMPGLAKEDVKISVEQNTLIIKGEG 152 HSP 2 Score: 39.6614 bits (91), Expect = 4.875e-20 Identity = 21/43 (48.84%), Postives = 32/43 (74.42%), Query Frame = 3 Query: 69 MASSLALKRLVSFNLIPRALRCTVAPSATSASRFFNTNAVRQY 197 MASSL KR +S +L+ R+L + P+A+++ R F+TNA+RQY Sbjct: 1 MASSLIAKRFLSSSLLSRSL---LRPAASASHRSFDTNAMRQY 40 HSP 3 Score: 25.7942 bits (55), Expect = 4.875e-20 Identity = 12/24 (50.00%), Postives = 15/24 (62.50%), Query Frame = 2 Query: 284 CV*SIFTNKEPEPGPELHGSDDGE 355 CV SIF++ E EPG E G G+ Sbjct: 72 CVGSIFSDSEFEPGSEHDGPGHGQ 95
BLAST of CX289175 vs. ExPASy Swiss-Prot
Match: HS23C_CHERU (Small heat shock protein, chloroplastic OS=Chenopodium rubrum GN=HSP23 PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 9.862e-19 Identity = 55/148 (37.16%), Postives = 77/148 (52.03%), Query Frame = 3 Query: 75 SSLALKRLVSFNLIPRALRCTVAPSATSASRFFNTNAVRQYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRSLSQVLNFMDQMTESPFFSGTRGG---LRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGE 509 +S+AL+RL S NL+ + + S SR FNTNA TRS+ Q++N MDQ+ E+PF + +RG +RRGWD +E ++AL L +DMPGL KEDV+VS+E NTL+I+ E Sbjct: 2 ASMALRRLASRNLVSGGIFRPL-----SVSRSFNTNAQMGRVDHDHELDDRSNRAPISRRGDFPASFFSDVFDPFRATRSVGQLMNLMDQLMENPFMAASRGSGRAMRRGWDVREDEEALELKVDMPGLAKEDVKVSVEDNTLIIKSE 144
BLAST of CX289175 vs. ExPASy Swiss-Prot
Match: HS24M_ORYSJ (24.1 kDa heat shock protein, mitochondrial OS=Oryza sativa subsp. japonica GN=HSP24.1 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 2.779e-13 Identity = 55/160 (34.38%), Postives = 80/160 (50.00%), Query Frame = 3 Query: 69 MASSLALKRLVSFNLIPRALRCTVAPSATSA---------SRFFNTNA-VRQYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT--RSLSQVLNFMDQMTESPFFSGTRGGLRRGWDAKETDDALNLSIDMPGLGKEDVRVSLEQNTLVIRGEG 512 MAS +A KR+ F L+ + L + A A SA SR +NT A +R++ + +SL ++L+ MD + +P LRRGW+AKE+++AL+L +DMPGLGKE V+V EQN+LVI+GEG Sbjct: 1 MASIVASKRIPLFRLVEQLLAASPAQGAASALRPVAVAGGSRAYNTGAQLRRHERDESDDDSGRGYDTRRPTRDATMPAFFSDVFRDPFSAPQSLGRLLSLMDDLA-TPAGRAGAATLRRGWNAKESEEALHLRVDMPGLGKEHVKVWAEQNSLVIKGEG 159 The following BLAST results are available for this feature:
BLAST of CX289175 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX289175 ID=CX289175; Name=CX289175; organism=Citrus clementina; type=EST; length=517bpback to top |