CX289318
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289318 vs. ExPASy Swiss-Prot
Match: EF1B2_ARATH (Elongation factor 1-beta 2 OS=Arabidopsis thaliana GN=At5g19510 PE=1 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 1.873e-49 Identity = 101/191 (52.88%), Postives = 121/191 (63.35%), Query Frame = 3 Query: 12 MAITFSDLHTESGLKSLDQYLSGKSYISGDQLTKDDIKVYAAVLKKPAGSFPNASRWYDSVSSHIAPSFPGKAVGVRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKMQIMMTIID 584 MA+TFSDLHTE G+KS++++L+GK+YISGDQL+ DD+KVYAAV KP+ +FPNAS+WY+SV+S +A SFPGKAVGV+ VL+DVKPWDDETDMKKLEEAVR VEMPGLFWGASKLVPVGYGIKK+ IM TI+D Sbjct: 1 MAVTFSDLHTEEGVKSVEEHLAGKTYISGDQLSVDDVKVYAAVPVKPSDAFPNASKWYESVASQLAKSFPGKAVGVQFGGSAAAAPAVEAEAPAAAADDDDDMDLFGDETEEEKKAAEEREAAKKDTKKPKESGKSSVLMDVKPWDDETDMKKLEEAVRGVEMPGLFWGASKLVPVGYGIKKLTIMFTIVD 191
BLAST of CX289318 vs. ExPASy Swiss-Prot
Match: EF1B1_ARATH (Elongation factor 1-beta 1 OS=Arabidopsis thaliana GN=At5g12110 PE=2 SV=2) HSP 1 Score: 187.963 bits (476), Expect = 2.991e-47 Identity = 102/195 (52.31%), Postives = 119/195 (61.03%), Query Frame = 3 Query: 12 MAITFSDLHTESGLKSLDQYLSGKSYISGDQLTKDDIKVYAAVLKKPAGSFPNASRWYDSVSSHIAPSFP----GKAVGVRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKMQIMMTIID 584 MA+TFSDLHTE GLK+L+++L+GK+YISGDQL+ DD+KVYAAVL+ P FPNAS+WYDSV+SH+A SFP G VG V VLL+VKPWDDETDMKKLEEAVRSV+MPGL WGASKLVPVGYGIKK+ IMMTI+D Sbjct: 1 MAVTFSDLHTERGLKTLEEHLAGKTYISGDQLSVDDVKVYAAVLENPGDGFPNASKWYDSVASHLAKSFPGKADGVRVGGGVAPPSEAHPHTEEPAADGDGDDDDDIDLFADETEDEKKAAEEREAAKKDTKKTKESGKSSVLLEVKPWDDETDMKKLEEAVRSVQMPGLTWGASKLVPVGYGIKKLTIMMTIVD 195
BLAST of CX289318 vs. ExPASy Swiss-Prot
Match: EF1B_ORYSJ (Elongation factor 1-beta OS=Oryza sativa subsp. japonica GN=Os07g0662500 PE=1 SV=3) HSP 1 Score: 186.808 bits (473), Expect = 6.662e-47 Identity = 97/191 (50.79%), Postives = 118/191 (61.78%), Query Frame = 3 Query: 12 MAITFSDLHTESGLKSLDQYLSGKSYISGDQLTKDDIKVYAAVLKKPAGSFPNASRWYDSVSSHIAPSFPGKAVGVRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKMQIMMTIID 584 MA+TF+DLHT GLK+L+Q+LSGK+Y+SG+ ++KDDIKV+AAV KP FPNA+RWYD+V++ +A FPGKAVGV + VLLDVKPWDDETDMKKLEEAVRSV+M GL WGASKLVPVGYGIKK+QIM+TI+D Sbjct: 1 MAVTFTDLHTADGLKALEQHLSGKTYVSGNAISKDDIKVFAAVPSKPGAEFPNAARWYDTVAAALASRFPGKAVGVNLPGGGAASSAAAAAPAAKDADEDDDDLDLFGDETEEDKKAADERAASKASSKKKESGKSSVLLDVKPWDDETDMKKLEEAVRSVQMEGLTWGASKLVPVGYGIKKLQIMLTIVD 191
BLAST of CX289318 vs. ExPASy Swiss-Prot
Match: EF1B_WHEAT (Elongation factor 1-beta OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 8.762e-23 Identity = 47/76 (61.84%), Postives = 64/76 (84.21%), Query Frame = 3 Query: 12 MAITFSDLHTESGLKSLDQYLSGKSYISGDQLTKDDIKVYAAVLKKPAGSFPNASRWYDSVSSHIAPSFPGKAVGV 239 MA+TFSDLHT GLK+L+ +L+GK+YISGD +TKDD+KV+AAV KP+ FPNA+RWYD+V++ ++ FPG+A GV Sbjct: 1 MAVTFSDLHTADGLKALEAHLAGKTYISGDGITKDDVKVFAAVPLKPSAEFPNAARWYDTVAAAVSSRFPGQASGV 76 HSP 2 Score: 100.908 bits (250), Expect = 4.808e-21 Identity = 46/54 (85.19%), Postives = 52/54 (96.30%), Query Frame = 3 Query: 423 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKMQIMMTIID 584 VL+D+KPWDDETDMKKLEEAVRSV+M GL WGASKL+PVGYGIKK+QIM+TIID Sbjct: 132 VLMDIKPWDDETDMKKLEEAVRSVQMEGLTWGASKLMPVGYGIKKLQIMLTIID 185
BLAST of CX289318 vs. ExPASy Swiss-Prot
Match: EF1D2_ARATH (Elongation factor 1-delta 2 OS=Arabidopsis thaliana GN=At2g18110 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 3.681e-21 Identity = 45/54 (83.33%), Postives = 51/54 (94.44%), Query Frame = 3 Query: 423 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKMQIMMTIID 584 VL+D+KPWDDETDMKKLEEAVRS++M GLFWGASKLVPVGYGIKK+ IM TI+D Sbjct: 145 VLMDIKPWDDETDMKKLEEAVRSIQMEGLFWGASKLVPVGYGIKKLHIMCTIVD 198
BLAST of CX289318 vs. ExPASy Swiss-Prot
Match: EF1D2_ORYSJ (Elongation factor 1-delta 2 OS=Oryza sativa subsp. japonica GN=Os03g0406200 PE=2 SV=3) HSP 1 Score: 100.908 bits (250), Expect = 4.808e-21 Identity = 47/54 (87.04%), Postives = 51/54 (94.44%), Query Frame = 3 Query: 423 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKMQIMMTIID 584 VLLDVKPWDDETDM KLEEAVR+V+M GL WGASKLVPVGYGIKK+QIMMTI+D Sbjct: 140 VLLDVKPWDDETDMAKLEEAVRNVKMEGLLWGASKLVPVGYGIKKLQIMMTIVD 193 HSP 2 Score: 71.633 bits (174), Expect = 3.124e-12 Identity = 35/79 (44.30%), Postives = 55/79 (69.62%), Query Frame = 3 Query: 12 MAITFSDLHTESGLKSLDQYLSGKSYISGDQLTKDDIKVYAAVLKKPAGSFPNASRWYDSVSSHIAPS-FPGKAVGVRV 245 MAIT S++++E+GL+ LD+YL +SYISG Q +KDD+ V+ ++ PA S+ N +RWYD +S+ + S + GV+V Sbjct: 1 MAITLSNVNSEAGLQKLDEYLLTRSYISGYQASKDDMTVFTSLPSAPAASYVNVTRWYDHISALLRSSGVTAEGEGVKV 79
BLAST of CX289318 vs. ExPASy Swiss-Prot
Match: EF1D1_ORYSJ (Elongation factor 1-delta 1 OS=Oryza sativa subsp. japonica GN=Os07g0614500 PE=2 SV=3) HSP 1 Score: 100.908 bits (250), Expect = 4.808e-21 Identity = 47/54 (87.04%), Postives = 51/54 (94.44%), Query Frame = 3 Query: 423 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKMQIMMTIID 584 VLLDVKPWDDETDM KLEEAVR+V+M GL WGASKLVPVGYGIKK+QIMMTI+D Sbjct: 143 VLLDVKPWDDETDMTKLEEAVRNVKMEGLLWGASKLVPVGYGIKKLQIMMTIVD 196
BLAST of CX289318 vs. ExPASy Swiss-Prot
Match: EF1D1_ARATH (Elongation factor 1-delta 1 OS=Arabidopsis thaliana GN=At1g30230 PE=2 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 4.808e-21 Identity = 44/54 (81.48%), Postives = 52/54 (96.30%), Query Frame = 3 Query: 423 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKMQIMMTIID 584 VL+D+KPWDDETDMKKLEEAV+S++M GLFWGASKLVPVGYGIKK+QI+ TI+D Sbjct: 145 VLIDIKPWDDETDMKKLEEAVKSIQMEGLFWGASKLVPVGYGIKKLQILCTIVD 198
BLAST of CX289318 vs. ExPASy Swiss-Prot
Match: EF1D_PIMBR (Elongation factor 1-delta OS=Pimpinella brachycarpa PE=2 SV=3) HSP 1 Score: 97.4413 bits (241), Expect = 5.316e-20 Identity = 45/54 (83.33%), Postives = 50/54 (92.59%), Query Frame = 3 Query: 423 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKMQIMMTIID 584 VLLDVKPWDDETDM KLEEAVRS++M GL WGASKLV VGYGIKK+QIM+TI+D Sbjct: 140 VLLDVKPWDDETDMTKLEEAVRSIKMDGLLWGASKLVAVGYGIKKLQIMLTIVD 193 HSP 2 Score: 74.3294 bits (181), Expect = 4.819e-13 Identity = 33/63 (52.38%), Postives = 47/63 (74.60%), Query Frame = 3 Query: 12 MAITFSDLHTESGLKSLDQYLSGKSYISGDQLTKDDIKVYAAVLKKPAGSFPNASRWYDSVSS 200 MA+TF DL +E+GL+ LD+YL +SYISG Q +KDD+ V+AA+ K P+ + N SRWY+ V + Sbjct: 1 MAVTFYDLSSEAGLEKLDEYLLSRSYISGYQASKDDLAVHAALAKPPSSKYVNVSRWYNHVEA 63
BLAST of CX289318 vs. ExPASy Swiss-Prot
Match: EF1D_BETVU (Elongation factor 1-delta OS=Beta vulgaris PE=2 SV=3) HSP 1 Score: 94.7449 bits (234), Expect = 3.446e-19 Identity = 46/54 (85.19%), Postives = 49/54 (90.74%), Query Frame = 3 Query: 423 VLLDVKPWDDETDMKKLEEAVRSVEMPGLFWGASKLVPVGYGIKKMQIMMTIID 584 VLLDVKPWDDETDMKKLEEAVRSV+ GL GASKLVPVGYGIKK+ IMMTI+D Sbjct: 145 VLLDVKPWDDETDMKKLEEAVRSVQQEGLTLGASKLVPVGYGIKKLTIMMTIVD 198 HSP 2 Score: 70.0922 bits (170), Expect = 9.088e-12 Identity = 37/79 (46.84%), Postives = 51/79 (64.56%), Query Frame = 3 Query: 12 MAITFSDLHTESGLKSLDQYLSGKSYISGDQLTKDDIKVYAAVLKKPAGSFPNASRWYDSVSSHIAPS-FPGKAVGVRV 245 MA+TFSDL + +GL SLD YL +SYI+G Q +KDD+ V++AV K S+ N SRWY + + + S G+ GV V Sbjct: 1 MAVTFSDLSSPAGLDSLDAYLLSRSYITGYQASKDDLTVFSAVPKASLASYVNVSRWYKHIDALLRISGVSGEGSGVTV 79 The following BLAST results are available for this feature:
BLAST of CX289318 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289318 ID=CX289318; Name=CX289318; organism=Citrus clementina; type=EST; length=586bpback to top |