CX289322
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289322 vs. ExPASy Swiss-Prot
Match: BRP16_RAT (Brain protein 16 OS=Rattus norvegicus GN=Brp16 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.132e-15 Identity = 54/168 (32.14%), Postives = 96/168 (57.14%), Query Frame = 2 Query: 8 HVGSILVNISKKEAGRKILLDPKRGLLKQIV--RQFDSSNYLRKKGVSGTIRNCCFEAEHQLQNLLLISEFLWPALLLPVAGNKVYKEEDTSKIPLELASALRIEREPVDDPEIRIQALESIYLITLQEAGLRAFWSVNGPRVLQVGYEDEGDPKVMEAYEQVGSLLV 505 ++G +L N+S++ R LLDP R ++++++ Q+ S+ +R+ GV GT+RNCCFE H + LL + P LLLP+AG + + EE+ ++P++L L +++ D +IR +E+I L+T G + +L+ Y E +P V A E++ +L+ Sbjct: 182 YLGPLLSNLSQQAEVRAFLLDPDRCVVQRLLPLTQYTDSS-VRRGGVVGTLRNCCFEHRHH-KWLLGPQVDILPFLLLPLAGPEEFSEEEMEELPVDL-QYLSPDKQREPDADIRKMLIEAIMLLTATAPGRKQVRDQGAYLILRELYAWESEPDVRMACEKLIQVLI 346
BLAST of CX289322 vs. ExPASy Swiss-Prot
Match: BRP16_HUMAN (Brain protein 16 OS=Homo sapiens GN=BRP16 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.202e-14 Identity = 53/168 (31.55%), Postives = 96/168 (57.14%), Query Frame = 2 Query: 8 HVGSILVNISKKEAGRKILLDPKRGLLKQIV--RQFDSSNYLRKKGVSGTIRNCCFEAEHQLQNLLLISEFLWPALLLPVAGNKVYKEEDTSKIPLELASALRIEREPVDDPEIRIQALESIYLITLQEAGLRAFWSVNGPRVLQVGYEDEGDPKVMEAYEQVGSLLV 505 ++ +L N+S++ A R LLDP R ++++++ Q+ S+ +R+ GV GT+RNCCFE H + LL + P LLLP+AG + + EE+ ++P++L L +++ D +IR +E+I L+T G + +L+ + E +P V A E++ +L+ Sbjct: 175 YLAPLLSNLSQRPAARAFLLDPDRCVVQRLLPLTQYPDSS-VRRGGVVGTLRNCCFEHRHH-EWLLGPEVDILPFLLLPLAGPEDFSEEEMERLPVDL-QYLPPDKQREPDADIRKMLVEAIMLLTATAPGRQQVRDQGAYLILRELHSWEPEPDVRTACEKLIQVLI 339
BLAST of CX289322 vs. ExPASy Swiss-Prot
Match: BP16L_HUMAN (Brain protein 16-like OS=Homo sapiens GN=BRP16L PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.202e-14 Identity = 53/168 (31.55%), Postives = 96/168 (57.14%), Query Frame = 2 Query: 8 HVGSILVNISKKEAGRKILLDPKRGLLKQIV--RQFDSSNYLRKKGVSGTIRNCCFEAEHQLQNLLLISEFLWPALLLPVAGNKVYKEEDTSKIPLELASALRIEREPVDDPEIRIQALESIYLITLQEAGLRAFWSVNGPRVLQVGYEDEGDPKVMEAYEQVGSLLV 505 ++ +L N+S++ A R LLDP R ++++++ Q+ S+ +R+ GV GT+RNCCFE H + LL + P LLLP+AG + + EE+ ++P++L L +++ D +IR +E+I L+T G + +L+ + E +P V A E++ +L+ Sbjct: 175 YLAPLLSNLSQRPAARAFLLDPDRCVVQRLLPLTQYPDSS-VRRGGVVGTLRNCCFEHRHH-EWLLGPEVDILPFLLLPLAGPEDFSEEEMQRLPVDL-QYLPPDKQREPDADIRKMLVEAIMLLTATAPGRQQVRDQGAYLILRELHSWEPEPDVRTACEKLIQVLI 339
BLAST of CX289322 vs. ExPASy Swiss-Prot
Match: BRP16_MOUSE (Brain protein 16 OS=Mus musculus GN=Brp16 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.570e-14 Identity = 52/168 (30.95%), Postives = 96/168 (57.14%), Query Frame = 2 Query: 8 HVGSILVNISKKEAGRKILLDPKRGLLKQIV--RQFDSSNYLRKKGVSGTIRNCCFEAEHQLQNLLLISEFLWPALLLPVAGNKVYKEEDTSKIPLELASALRIEREPVDDPEIRIQALESIYLITLQEAGLRAFWSVNGPRVLQVGYEDEGDPKVMEAYEQVGSLLV 505 ++G +L N+S++ R LLDP R ++++++ Q+ S+ +R+ GV GT+RNCCFE H + LL + P LLLP+AG + + EE+ ++P++L L +++ D +IR +E++ L+T G + +L+ + E +P V A E++ +L+ Sbjct: 182 YLGPLLSNLSQQAEVRAFLLDPDRCVVQRLLPLTQYTDSS-VRRGGVVGTLRNCCFEHRHH-KWLLGAQVDILPFLLLPLAGPEEFSEEEMDQLPVDL-QYLSPDKQREPDADIRKMLIEAVMLLTATAPGRKQVRDQGAYLILRELHSWEPEPDVRMACEKLIQVLI 346
BLAST of CX289322 vs. ExPASy Swiss-Prot
Match: BRP16_DANRE (Brain protein 16 OS=Danio rerio GN=brp16 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.678e-14 Identity = 51/168 (30.36%), Postives = 96/168 (57.14%), Query Frame = 2 Query: 8 HVGSILVNISKKEAGRKILLDPKRGLLKQIV--RQFDSSNYLRKKGVSGTIRNCCFEAEHQLQNLLLISEFLWPALLLPVAGNKVYKEEDTSKIPLELASALRIEREPVDDPEIRIQALESIYLITLQEAGLRAFWSVNGPRVLQVGYEDEGDPKVMEAYEQVGSLLV 505 ++ +L N+++ R +LD R ++++++ Q++ S R+ GV GT+RNCCF+ H + LL + + P LLLP+AG + EE+ +P++L L ++ +DP+IR LE++ L+T + G + S N +++ ++ E DP V+ A E++ L+ Sbjct: 158 YLAPLLSNLTQLPEARHFILDKDRCVIQRLLPFTQYEES-ITRRGGVVGTLRNCCFDYVHH-EWLLSDAVDILPFLLLPLAGPEELSEEENEGLPVDL-QYLPEDKRREEDPDIRKMLLETLMLLTATKVGRQILKSKNVYPIMREFHKWEKDPHVISACEKLVQALI 322
BLAST of CX289322 vs. ExPASy Swiss-Prot
Match: BRP16_XENTR (Brain protein 16 OS=Xenopus tropicalis GN=brp16 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.018e-13 Identity = 49/168 (29.17%), Postives = 92/168 (54.76%), Query Frame = 2 Query: 5 EHVGSILVNISKKEAGRKILLDPKRGLLKQIVRQFDSSNYLRKKGVSGTIRNCCFEAEHQLQNLLLISEF-LWPALLLPVAGNKVYKEEDTSKIPLELASALRIEREPVDDPEIRIQALESIYLITLQEAGLRAFWSVNGPRVLQVGYEDEGDPKVMEAYEQVGSLLV 505 +++G +L N+++ GR +LD R ++++++ S + +R+ G+ GT+RNCCF H+ LL + L P LLLP+AG + + EE+ +P +L L +++ DP+IR +E++ L+ G R V++ + E +P V A E++ +L+ Sbjct: 155 DYLGPLLCNLTQLPEGRHFILDRNRCVVQRLLPYLQSGSTVRRGGIVGTLRNCCF--SHRDHAWLLGDDVDLLPFLLLPLAGGEEFTEEEMETLPPDL-QYLAEDKQREADPDIRKMLIETVLLLCATADGRRLVKQRGTYLVMRELHSWEREPCVKRACEKLIQMLI 319
BLAST of CX289322 vs. ExPASy Swiss-Prot
Match: BRP16_XENLA (Brain protein 16 OS=Xenopus laevis GN=brp16 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.329e-13 Identity = 47/168 (27.98%), Postives = 91/168 (54.17%), Query Frame = 2 Query: 5 EHVGSILVNISKKEAGRKILLDPKRGLLKQIVRQFDSSNYLRKKGVSGTIRNCCFEAEHQLQNLLLISEF-LWPALLLPVAGNKVYKEEDTSKIPLELASALRIEREPVDDPEIRIQALESIYLITLQEAGLRAFWSVNGPRVLQVGYEDEGDPKVMEAYEQVGSLLV 505 +++G ++ N+++ GR +LD R ++++++ + + +RK G+ GT+RNCCF H+ LL + L P LLLP+AG + Y +E+ +P +L L ++E DP+IR +E++ L+ G R +++ + E + V A E++ +L+ Sbjct: 155 DYLGPLVCNLTQLPEGRDFILDRDRCVIQRLLPYVTAGSTVRKGGIVGTLRNCCF--NHRDHEWLLSDQVDLLPFLLLPLAGGEEYTDEEMESLPPDL-QYLPEDKERESDPDIRKMLIETVQLLCATAGGRRIVRQKGTYLIMRELHSWERESYVSRACEKLIQVLI 319
BLAST of CX289322 vs. ExPASy Swiss-Prot
Match: U570_DICDI (UPF0570 protein OS=Dictyostelium discoideum GN=DDB_G0276861 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.625e-11 Identity = 43/164 (26.22%), Postives = 87/164 (53.05%), Query Frame = 2 Query: 17 SILVNISKKEAGRKILLDPKRGLLKQIVRQFDSSNYLRKKGVSGTIRNCCFEAEHQLQNLLLISEFLWPALLLPVAGNKVYKEEDTSKIPLEL-ASALRIEREPVDDPEIRIQALESIYLITLQEAGLRAFWSVNGPRVLQVGYEDEGDPKVMEAYEQVGSLLV 505 +I++N+++ + GRKI+LD + + K+I+ N ++++G+ G IRNCC+ +H L+ + L LP+ GN ++D + ++L S+L I E D E R +ES+ +T + G + + +L+ + E + ++ + E+V L++ Sbjct: 160 NIILNVTQIQEGRKIVLDKENQIFKEILPLVRHENVIKRRGILGIIRNCCYSEQHH-DYLISPEVDILTKLCLPIRGNDKLDDDDLVGLHIDLHNSSLPIGNERDQDRECRKMVVESLIFLTGTKKGRVSMRTAKIYPILRNLFNFETEEELRDNVEKVVELII 322 The following BLAST results are available for this feature:
BLAST of CX289322 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX289322 ID=CX289322; Name=CX289322; organism=Citrus clementina; type=EST; length=595bpback to top |