CX289325
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289325 vs. ExPASy Swiss-Prot
Match: COPA2_ARATH (Coatomer subunit alpha-2 OS=Arabidopsis thaliana GN=At2g21390 PE=2 SV=1) HSP 1 Score: 255.373 bits (651), Expect = 7.346e-68 Identity = 118/144 (81.94%), Postives = 134/144 (93.06%), Query Frame = 2 Query: 2 EYVLGLQLELKRRELKDDPVRQQELAAYFTHCNLQMPHLRLALLNAMSVCFKNKNLATAGNFARRLLETNPTIESQSKTARQVLQAAERNPTDATQLNYDFRNPFVICGATHVPIYRGQKDVSCPYCTTRFVPSQEGQLCSVCD 433 EYVLGLQLELKRRE+KDDPVRQQELAAYFTHC LQ PHLRLA +AM+VC+K+KN+ATA +FAR LL+TNPTIESQ++TARQV+QAAERN TDAT LNYDFRNPFVICG+T+VPIY+GQKDV+CPYCT RFVPSQEG +CSVCD Sbjct: 1056 EYVLGLQLELKRREMKDDPVRQQELAAYFTHCKLQTPHLRLAYFSAMTVCYKSKNMATAAHFARSLLDTNPTIESQARTARQVMQAAERNMTDATTLNYDFRNPFVICGSTYVPIYKGQKDVACPYCTARFVPSQEGNICSVCD 1199
BLAST of CX289325 vs. ExPASy Swiss-Prot
Match: COPA1_ARATH (Coatomer subunit alpha-1 OS=Arabidopsis thaliana GN=At1g62020 PE=1 SV=2) HSP 1 Score: 251.906 bits (642), Expect = 8.121e-67 Identity = 118/144 (81.94%), Postives = 134/144 (93.06%), Query Frame = 2 Query: 2 EYVLGLQLELKRRELKDDPVRQQELAAYFTHCNLQMPHLRLALLNAMSVCFKNKNLATAGNFARRLLETNPTIESQSKTARQVLQAAERNPTDATQLNYDFRNPFVICGATHVPIYRGQKDVSCPYCTTRFVPSQEGQLCSVCD 433 EYVLGLQ+ELKRRE+KDDPVRQQELAAYFTHCNLQ PHLRLALL+AM VC+K KNLATA NFARRLLET+P ++SQ+K ARQV+QAAERN TD T+LNYDFRNPFV+CG+T+VPIYRGQKDVSCPYCT RFVP+QEG +C+VCD Sbjct: 1055 EYVLGLQMELKRREMKDDPVRQQELAAYFTHCNLQTPHLRLALLSAMGVCYKAKNLATASNFARRLLETSP-VDSQAKMARQVVQAAERNMTDETKLNYDFRNPFVVCGSTYVPIYRGQKDVSCPYCTARFVPNQEGNICTVCD 1197
BLAST of CX289325 vs. ExPASy Swiss-Prot
Match: COPA3_ORYSJ (Coatomer subunit alpha-3 OS=Oryza sativa subsp. japonica GN=Os09g0127800 PE=2 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 3.663e-51 Identity = 97/144 (67.36%), Postives = 117/144 (81.25%), Query Frame = 2 Query: 2 EYVLGLQLELKRRELKDDPVRQQELAAYFTHCNLQMPHLRLALLNAMSVCFKNKNLATAGNFARRLLETNPTIESQSKTARQVLQAAERNPTDATQLNYDFRNPFVICGATHVPIYRGQKDVSCPYCTTRFVPSQEGQLCSVCD 433 EYVLGL++ELKR+EL+DD RQQELAAYFT+C LQ H+RL L +AM +C+K KN ATA +FAR LLE NP ESQ+K ARQV Q D+ +LNYD+RNPFV+CGAT+VPIYRGQKDVSCPYC +RFVPS EGQLC++C+ Sbjct: 1058 EYVLGLRMELKRKELRDDVNRQQELAAYFTNCKLQRVHMRLVLGSAMGLCYKQKNFATAEHFARMLLENNPN-ESQAKRARQVQQQCS-GKKDSCELNYDYRNPFVVCGATYVPIYRGQKDVSCPYCGSRFVPSIEGQLCTICE 1199
BLAST of CX289325 vs. ExPASy Swiss-Prot
Match: COPA2_ORYSJ (Coatomer subunit alpha-2 OS=Oryza sativa subsp. japonica GN=Os03g0711500 PE=2 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 1.066e-50 Identity = 95/144 (65.97%), Postives = 118/144 (81.94%), Query Frame = 2 Query: 2 EYVLGLQLELKRRELKDDPVRQQELAAYFTHCNLQMPHLRLALLNAMSVCFKNKNLATAGNFARRLLETNPTIESQSKTARQVLQAAERNPTDATQLNYDFRNPFVICGATHVPIYRGQKDVSCPYCTTRFVPSQEGQLCSVCD 433 EYVLGL++ELKR+EL+DD RQQELAAYFT+C LQ H+RL L +AM +C+K KN ATA +FAR LLE NP E+Q++ ARQV Q D+++LNYD+RNPFV+CGAT+VPIYRGQKDVSCPYC +RFVPS EGQLC++C+ Sbjct: 1058 EYVLGLRMELKRKELRDDVNRQQELAAYFTNCKLQRVHMRLVLGSAMGLCYKQKNFATAEHFARMLLENNPN-EAQARRARQVQQQCS-GKKDSSELNYDYRNPFVVCGATYVPIYRGQKDVSCPYCGSRFVPSIEGQLCTICE 1199
BLAST of CX289325 vs. ExPASy Swiss-Prot
Match: COPA1_ORYSJ (Coatomer subunit alpha-1 OS=Oryza sativa subsp. japonica GN=Os03g0711400 PE=2 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 1.066e-50 Identity = 95/144 (65.97%), Postives = 118/144 (81.94%), Query Frame = 2 Query: 2 EYVLGLQLELKRRELKDDPVRQQELAAYFTHCNLQMPHLRLALLNAMSVCFKNKNLATAGNFARRLLETNPTIESQSKTARQVLQAAERNPTDATQLNYDFRNPFVICGATHVPIYRGQKDVSCPYCTTRFVPSQEGQLCSVCD 433 EYVLGL++ELKR+EL+DD RQQELAAYFT+C LQ H+RL L +AM +C+K KN ATA +FAR LLE NP E+Q++ ARQV Q D+++LNYD+RNPFV+CGAT+VPIYRGQKDVSCPYC +RFVPS EGQLC++C+ Sbjct: 1058 EYVLGLRMELKRKELRDDVNRQQELAAYFTNCKLQRVHMRLVLGSAMGLCYKQKNFATAEHFARMLLENNPN-EAQARRARQVQQQCS-GKKDSSELNYDYRNPFVVCGATYVPIYRGQKDVSCPYCGSRFVPSIEGQLCTICE 1199
BLAST of CX289325 vs. ExPASy Swiss-Prot
Match: COPA_DICDI (Coatomer subunit alpha OS=Dictyostelium discoideum GN=copa PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 2.385e-34 Identity = 73/151 (48.34%), Postives = 106/151 (70.20%), Query Frame = 2 Query: 2 EYVLGLQLELKRREL-----KDDPV-RQQELAAYFTHCNLQMPHLRLALLNAMSVCFKNKNLATAGNFARRLLETNPTIESQSKTARQVLQAAERNPT--DATQLNYDFRNPFVICGATHVPIYRGQKDVSCPYCTTRFVPSQEGQLCSVC 430 EY+LG+++EL+R+EL KD + RQ ELAAYFTHCNL HL L+L +AM+ +K K+ A +FARRL+ NP + ++ A++V A++ PT D QLNYD RNPFVIC ++VPIY+G + CPYC++ ++P+ +G++CSVC Sbjct: 1053 EYILGIKIELQRKELSIGAQKDSTLGRQAELAAYFTHCNLDPSHLILSLRSAMNCAYKVKHFNLAASFARRLISLNPNPDLATQ-AKKVFNFAQQTPTPSDIQQLNYDERNPFVICAHSYVPIYKGSPLIKCPYCSSCYLPTHKGKVCSVC 1202
BLAST of CX289325 vs. ExPASy Swiss-Prot
Match: COPA_MOUSE (Coatomer subunit alpha OS=Mus musculus GN=Copa PE=1 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 4.973e-32 Identity = 71/146 (48.63%), Postives = 95/146 (65.07%), Query Frame = 2 Query: 2 EYVLGLQLELKRRELKDDPVRQQ----ELAAYFTHCNLQMPHLRLALLNAMSVCFKNKNLATAGNFARRLLETNPTIESQSKTARQVLQAAERNPTDATQLNYDFRNPFVICGATHVPIYRGQKDVSCPYCTTRFVPSQEGQLCSV 427 EY++GL +E++R++L + + QQ E+AAYFTH NLQ H+ L L A+++ FK KN TA FARRLLE P E +T R++L A E+NPTDA QLNYD NPF IC A++ PIYRG+ CP + P +GQ+C V Sbjct: 1059 EYIVGLCMEIERKKLPKETLDQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQT-RKILSACEKNPTDACQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQICRV 1203
BLAST of CX289325 vs. ExPASy Swiss-Prot
Match: COPA_HUMAN (Coatomer subunit alpha OS=Homo sapiens GN=COPA PE=1 SV=2) HSP 1 Score: 136.346 bits (342), Expect = 4.973e-32 Identity = 71/146 (48.63%), Postives = 94/146 (64.38%), Query Frame = 2 Query: 2 EYVLGLQLELKRRELKDDPVRQQ----ELAAYFTHCNLQMPHLRLALLNAMSVCFKNKNLATAGNFARRLLETNPTIESQSKTARQVLQAAERNPTDATQLNYDFRNPFVICGATHVPIYRGQKDVSCPYCTTRFVPSQEGQLCSV 427 EY++GL +E +R++L + + QQ E+AAYFTH NLQ H+ L L A+++ FK KN TA FARRLLE P E +T R++L A E+NPTDA QLNYD NPF IC A++ PIYRG+ CP + P +GQ+C V Sbjct: 1059 EYIVGLSVETERKKLPKETLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQT-RKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQICRV 1203
BLAST of CX289325 vs. ExPASy Swiss-Prot
Match: COPA_BOVIN (Coatomer subunit alpha OS=Bos taurus GN=COPA PE=1 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 4.973e-32 Identity = 71/146 (48.63%), Postives = 94/146 (64.38%), Query Frame = 2 Query: 2 EYVLGLQLELKRRELKDDPVRQQ----ELAAYFTHCNLQMPHLRLALLNAMSVCFKNKNLATAGNFARRLLETNPTIESQSKTARQVLQAAERNPTDATQLNYDFRNPFVICGATHVPIYRGQKDVSCPYCTTRFVPSQEGQLCSV 427 EY++GL +E +R++L + + QQ E+AAYFTH NLQ H+ L L A+++ FK KN TA FARRLLE P E +T R++L A E+NPTDA QLNYD NPF IC A++ PIYRG+ CP + P +GQ+C V Sbjct: 1059 EYIVGLSMETERKKLPKETLEQQKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFRTAAAFARRLLELGPKPEVAQQT-RKILSACEKNPTDAYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFKGQICKV 1203
BLAST of CX289325 vs. ExPASy Swiss-Prot
Match: COPA_YEAST (Coatomer subunit alpha OS=Saccharomyces cerevisiae GN=RET1 PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 2.243e-16 Identity = 53/140 (37.86%), Postives = 80/140 (57.14%), Query Frame = 2 Query: 2 EYVLGLQLELKRRELKD-DPVRQQELAAYFTHCNLQMPHLRLALLNAMSVCFKNKNLATAGNFARRLLETNPTIESQSKTARQVLQAAERNPTDATQLNYDFRNPFVICGATHVPIYRGQKDVSCPYCTTRFVPSQEGQL 418 EY+LGL +EL+RR LK+ + VR ELAAYFT L H AL AMS FK+KN A FA L+ + +++ AR++ A+ +DA +++D F IC AT+ PIY VS P +++V +++ ++ Sbjct: 1043 EYILGLSIELERRSLKEGNTVRMLELAAYFTKAKLSPIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISS-GPRAEQARKIKNKADSMASDAIPIDFDPYAKFDICAATYKPIYEDTPSVSDPLTGSKYVITEKDKI 1181 The following BLAST results are available for this feature:
BLAST of CX289325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX289325 ID=CX289325; Name=CX289325; organism=Citrus clementina; type=EST; length=435bpback to top |