CX289332
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289332 vs. ExPASy Swiss-Prot
Match: PROSC_HUMAN (Proline synthetase co-transcribed bacterial homolog protein OS=Homo sapiens GN=PROSC PE=1 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 7.602e-33 Identity = 77/159 (48.43%), Postives = 108/159 (67.92%), Query Frame = 2 Query: 77 LRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA-----QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGR-KPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPN 529 LR+V +RV QA R R P + R+VAVSKTKP ++ + Y G R FGENYVQE++EKA+ L +++WHFIG+LQ V L+A VPNL M+E+VD+ K+A ++N + G + LKV+VQ+NTSGEESK G+ PS + +V+H++ CPN Sbjct: 17 LRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQRTFGENYVQELLEKASNPKILSLCPEIKWHFIGHLQKQNVNKLMA-VPNLFMLETVDSVKLADKVNSSWQRKGSPERLKVMVQINTSGEESKHGLPPSETIAIVEHINAKCPN 174
BLAST of CX289332 vs. ExPASy Swiss-Prot
Match: PROSC_PONAB (Proline synthetase co-transcribed bacterial homolog protein OS=Pongo abelii GN=PROSC PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 1.694e-32 Identity = 76/159 (47.80%), Postives = 108/159 (67.92%), Query Frame = 2 Query: 77 LRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAA-----QLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGR-KPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPN 529 LR+V +RV QA R P + R+VAVSKTKP ++ + Y G R FGENYVQE++EKA+ L +++WHFIG+LQ V L+A VPNL ++E+VD+ K+AG++N + G + LKV+VQ+NTSGEESK G+ PS + +V+H++ CPN Sbjct: 17 LRAVNERVQQAVALRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQRTFGENYVQELLEKASNPKILSLGPEIKWHFIGHLQKQNVNKLMA-VPNLFVLETVDSVKLAGKVNSSWQKKGSPERLKVMVQINTSGEESKHGLPPSETIAIVEHINAKCPN 174
BLAST of CX289332 vs. ExPASy Swiss-Prot
Match: PROSC_MOUSE (Proline synthetase co-transcribed bacterial homolog protein OS=Mus musculus GN=Prosc PE=1 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 4.927e-32 Identity = 74/159 (46.54%), Postives = 109/159 (68.55%), Query Frame = 2 Query: 77 LRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP-----DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMG-RKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPN 529 LR+V +RV Q+ R R P + R+VAVSKTKP ++ + Y G R FGENYVQE++EKA+ +++WHFIG+LQ V L+A VPNL+M+E+VD+ K+A ++N + G +PLKV+VQ+NTSGE+SK G+ PS + +V+H+ +CP+ Sbjct: 17 LRAVNERVQQSVARRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQRTFGENYVQELLEKASNPKILSSCPEIKWHFIGHLQKQNVNKLMA-VPNLSMLETVDSVKLADKVNSSWQKKGPTEPLKVMVQINTSGEDSKHGLLPSETIAVVEHIKASCPS 174
BLAST of CX289332 vs. ExPASy Swiss-Prot
Match: PROSC_BOVIN (Proline synthetase co-transcribed bacterial homolog protein OS=Bos taurus GN=PROSC PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 4.171e-31 Identity = 74/159 (46.54%), Postives = 106/159 (66.67%), Query Frame = 2 Query: 77 LRSVIQRVHQAAERSSR--PPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLP-----DDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGR-KPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPN 529 LR+V +RV QA R R P + R+VAVSKTKP ++ + Y G R FGENYVQE++EKA+ +++WHFIG+LQ V L+A VPNL+M+E+VD+ K+A ++N + G + LKV+VQ+NTSGE SK G+ P+ LV+H++ CP+ Sbjct: 17 LRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYSHGQRTFGENYVQELLEKASNPQILSSCPEIKWHFIGHLQKQNVNKLMA-VPNLSMLETVDSVKLADKVNSAWQKKGSPERLKVMVQINTSGEASKHGLPPAEMAALVEHINAKCPS 174
BLAST of CX289332 vs. ExPASy Swiss-Prot
Match: PROSC_DICDI (Proline synthetase co-transcribed bacterial homolog protein OS=Dictyostelium discoideum GN=prosc PE=3 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 7.115e-31 Identity = 76/167 (45.51%), Postives = 105/167 (62.87%), Query Frame = 2 Query: 77 LRSVIQRVHQAAERSSRPPDR--IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD--DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRL----------NRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHV--SQNCPN 529 L S + + E S DR +++VAVSKTKP +IR +Y+ GHR FGENY+QE+V K+ +L + +++WHFIG++QSNK K +L V NL +VE+V+N+KI +L N K L +++QVNTSGEESKSG +P CL+LVKH NC N Sbjct: 10 LISSYKNIKDRVEIISNKFDRHNVKLVAVSKTKPTEMIRILYDKGHRHFGENYIQELVSKSEELSELNEIKWHFIGSIQSNKSK-ILTSVKNLYVVETVENKKILDKLAKSLLNNEENNNNNNNNNNKKLNIMIQVNTSGEESKSGCKPEECLDLVKHCLEDNNCKN 175
BLAST of CX289332 vs. ExPASy Swiss-Prot
Match: Y112_PASMU (UPF0001 protein PM0112 OS=Pasteurella multocida GN=PM0112 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.136e-28 Identity = 71/154 (46.10%), Postives = 98/154 (63.64%), Query Frame = 2 Query: 77 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKA---AQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPN 529 L + Q + A +++ RP ++++AVSKTKPV I Q Y+AG FGENYVQE VEK AQ LEWHFIG LQSNK K + + ++++D +KIA RLN +KPL VL+Q+N S E+SKSG++P+ L+L K + QN P+ Sbjct: 7 LAQIQQNIQHAVQQAKRPESAVKLLAVSKTKPVEDIYQAYQAGQTAFGENYVQEGVEKIQYFAQKNIPLEWHFIGPLQSNKTKLV---AEHFDWMQTLDRKKIADRLNEQ-RPHYKKPLNVLIQINISDEDSKSGIQPNEMLDLAKQI-QNLPH 155
BLAST of CX289332 vs. ExPASy Swiss-Prot
Match: YKC9_SCHPO (UPF0001 protein C644.09 OS=Schizosaccharomyces pombe GN=SPAC644.09 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 9.617e-28 Identity = 64/124 (51.61%), Postives = 85/124 (68.55%), Query Frame = 2 Query: 140 IRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPDDLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHV 511 + +VAVSK PV + + Y AG R FGENY+QE ++K +PDD++WHFIG+LQS+K K +A V NL +E++D EK A +N E + + PL V +QVNTSGEE+K GV PS LEL K V Sbjct: 24 VLLVAVSKFHPVETLMEAYNAGQRHFGENYMQEFLKKVELMPDDVQWHFIGSLQSSKCKK-IASVKNLYSIETIDTEKKARLVNSAREAL-QLPLNVYIQVNTSGEENKGGVTPSKVLELCKQV 145
BLAST of CX289332 vs. ExPASy Swiss-Prot
Match: Y090_HAEIN (UPF0001 protein HI0090 OS=Haemophilus influenzae GN=HI0090 PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 2.798e-27 Identity = 67/154 (43.51%), Postives = 95/154 (61.69%), Query Frame = 2 Query: 77 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD---DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQNCPN 529 L + Q++ A + +R + ++++AVSKTKP+S I Y+AG FGENYVQE VEK +LEWHFIG LQSNK + + + ++++D KIA RLN T + PL VL+Q+N S EESKSG++P L L KH+ +N P+ Sbjct: 7 LNLIQQKIETACKEENRNQNTVKLLAVSKTKPISAILSAYQAGQTAFGENYVQEGVEKIQYFESQGINLEWHFIGPLQSNKTRLV---AEHFDWMQTLDRAKIADRLNEQRPT-NKAPLNVLIQINISDEESKSGIQPEEMLTLAKHI-ENLPH 155
BLAST of CX289332 vs. ExPASy Swiss-Prot
Match: Y394_PSEAE (UPF0001 protein PA0394 OS=Pseudomonas aeruginosa GN=PA0394 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.535e-25 Identity = 66/148 (44.59%), Postives = 88/148 (59.46%), Query Frame = 2 Query: 77 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEKAAQLPD-DLEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQ 517 + V R+ +AA+ + R P + ++AVSKTKP + +R+ + AG R FGENY+QE + K A+L D L WHFIG +QSNK +P+ + V SVD KIA RL+ G PL V +QVN SGE SKSG P L + V Q Sbjct: 8 IAKVAARIREAAQAAGRDPATVGLLAVSKTKPAAAVREAHAAGLRDFGENYLQEALGKQAELADLPLNWHFIGPIQSNKTRPI---AEHFQWVHSVDRLKIAQRLSEQ-RPAGLPPLNVCLQVNVSGEASKSGCAPEDLPALAEAVKQ 151
BLAST of CX289332 vs. ExPASy Swiss-Prot
Match: YPI1_VIBAL (UPF0001 protein in pilT-proC intergenic region OS=Vibrio alginolyticus PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 9.952e-25 Identity = 65/152 (42.76%), Postives = 92/152 (60.53%), Query Frame = 2 Query: 77 LRSVIQRVHQAAERSSRPPDRIRIVAVSKTKPVSVIRQVYEAGHRCFGENYVQEIVEK----AAQLPDD-LEWHFIGNLQSNKVKPLLAGVPNLAMVESVDNEKIAGRLNRMVETMGRKPLKVLVQVNTSGEESKSGVEPSGCLELVKHVSQ 517 + + ++ ++ R P+ ++++AVSKTKPV I + Y+AG FGENYVQE V K A PD+ +EWHFIG +QSNK + + + V ++D KIA RLN KPL+VL+QVNTSGE SKSGV + EL + +S+ Sbjct: 8 IEHITSQIRYDEQKCGRTPESVQLLAVSKTKPVEAILEAYQAGQTAFGENYVQEGVSKVQHFAEHYPDNRIEWHFIGPIQSNKSRLV---AEHFDWVHTIDRTKIAQRLNDQ-RPSELKPLQVLIQVNTSGEASKSGVTEAEVFELAELISR 155 The following BLAST results are available for this feature:
BLAST of CX289332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289332 ID=CX289332; Name=CX289332; organism=Citrus clementina; type=EST; length=530bpback to top |