CX289337

Overview
NameCX289337
Unique NameCX289337
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length580
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289337 vs. ExPASy Swiss-Prot
Match: MPK4_ARATH (Mitogen-activated protein kinase 4 OS=Arabidopsis thaliana GN=MPK4 PE=1 SV=2)

HSP 1 Score: 253.447 bits (646), Expect = 5.726e-67
Identity = 124/146 (84.93%), Postives = 132/146 (90.41%), Query Frame = 2
Query:  146 MSGESSSGS-GDHTIVKGVPTHGGRYVQYNVYGNLFEVSRKYVPPIRPVGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTDLHQIIRSHQDLTDDHC 580
            MS ES  GS GD +  KGV THGG YVQYNVYGNLFEVSRKYVPP+RP+GRGAYGIVCAA NSET EEVAIKKIGNAFDN IDAKRTLREIKLL+HMDHEN+IA+KDII+PPQRE FNDVYIVYELMDTDLHQIIRS+Q LTDDHC
Sbjct:    1 MSAESCFGSSGDQSSSKGVATHGGSYVQYNVYGNLFEVSRKYVPPLRPIGRGAYGIVCAATNSETGEEVAIKKIGNAFDNIIDAKRTLREIKLLKHMDHENVIAVKDIIKPPQRENFNDVYIVYELMDTDLHQIIRSNQPLTDDHC 146          
BLAST of CX289337 vs. ExPASy Swiss-Prot
Match: MMK2_MEDSA (Mitogen-activated protein kinase homolog MMK2 OS=Medicago sativa GN=MMK2 PE=2 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 2.037e-64
Identity = 118/145 (81.38%), Postives = 132/145 (91.03%), Query Frame = 2
Query:  146 MSGESSSGSGDHTIVKGVPTHGGRYVQYNVYGNLFEVSRKYVPPIRPVGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTDLHQIIRSHQDLTDDHC 580
            MS ES+  +     ++GVPTHGGRY+QYN+YGNLFEVSRKYVPPIR VGRGAYGIVCAA+N+ETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHEN+++IKDIIRPPQ+E FN VYIV ELMDTDLHQIIRS+Q +TDDHC
Sbjct:    1 MSVESAENN-----IRGVPTHGGRYLQYNIYGNLFEVSRKYVPPIRSVGRGAYGIVCAAVNAETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENVMSIKDIIRPPQKENFNHVYIVSELMDTDLHQIIRSNQPMTDDHC 140          
BLAST of CX289337 vs. ExPASy Swiss-Prot
Match: MPK12_ARATH (Mitogen-activated protein kinase 12 OS=Arabidopsis thaliana GN=MPK12 PE=1 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 1.011e-63
Identity = 120/145 (82.76%), Postives = 130/145 (89.66%), Query Frame = 2
Query:  146 MSGESSSGSGDHTIVKGVPTHGGRYVQYNVYGNLFEVSRKYVPPIRPVGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTDLHQIIRSHQDLTDDHC 580
            MSGESSSGS +H I K VPTHGGRYVQYNVYG LFEVSRKYVPPIRP+GRGA GIVCAA+NS T E+VAIKKIGNAFDN IDAKRTLREIKLLRHMDHEN+I IKDI+RPPQR+ FNDVYIVYELMDTDL +I+RS+Q LT D C
Sbjct:    1 MSGESSSGSTEHCI-KVVPTHGGRYVQYNVYGQLFEVSRKYVPPIRPIGRGACGIVCAAVNSVTGEKVAIKKIGNAFDNIIDAKRTLREIKLLRHMDHENVITIKDIVRPPQRDIFNDVYIVYELMDTDLQRILRSNQTLTSDQC 144          
BLAST of CX289337 vs. ExPASy Swiss-Prot
Match: MPK6_ORYSJ (Mitogen-activated protein kinase 6 OS=Oryza sativa subsp. japonica GN=MPK6 PE=2 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 3.841e-63
Identity = 116/144 (80.56%), Postives = 124/144 (86.11%), Query Frame = 2
Query:  149 SGESSSGSGDHTIVKGVPTHGGRYVQYNVYGNLFEVSRKYVPPIRPVGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTDLHQIIRSHQDLTDDHC 580
            S    +G G    +KG+ THGGRYV YNVYGN FEVS KY PPIRP+GRGAYGIVCAA+NSE  EEVAIKKIGNAFDN IDAKRTLREIKLLRHMDHENIIAIKDIIRPP+R+ FNDVYIV ELMDTDLHQIIRS+Q LTDDHC
Sbjct:    3 SSSGGAGGGGGAQIKGMGTHGGRYVLYNVYGNFFEVSSKYAPPIRPIGRGAYGIVCAAVNSENGEEVAIKKIGNAFDNHIDAKRTLREIKLLRHMDHENIIAIKDIIRPPRRDNFNDVYIVSELMDTDLHQIIRSNQPLTDDHC 146          
BLAST of CX289337 vs. ExPASy Swiss-Prot
Match: MPK2_ORYSJ (Mitogen-activated protein kinase 2 OS=Oryza sativa subsp. japonica GN=MPK2 PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 3.252e-62
Identity = 111/143 (77.62%), Postives = 125/143 (87.41%), Query Frame = 2
Query:  152 GESSSGSGDHTIVKGVPTHGGRYVQYNVYGNLFEVSRKYVPPIRPVGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTDLHQIIRSHQDLTDDHC 580
            G      G    +KG  THGGRYVQYNVYGNLFEVS KYVPPIRPVGRGA GI+CA +N++TR+EVAIKKIGNAFDN+IDAKRTLREIKLLRHMDH+N+I+IKDIIRPP+RE FNDVYIVYELMDTDLH ++RS+Q LTDDHC
Sbjct:   22 GHHGGIGGGEAQIKGTLTHGGRYVQYNVYGNLFEVSSKYVPPIRPVGRGACGIICAVVNAQTRQEVAIKKIGNAFDNQIDAKRTLREIKLLRHMDHDNVISIKDIIRPPRRENFNDVYIVYELMDTDLHHLLRSNQPLTDDHC 164          
BLAST of CX289337 vs. ExPASy Swiss-Prot
Match: NTF6_TOBAC (Mitogen-activated protein kinase homolog NTF6 OS=Nicotiana tabacum GN=NTF6 PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 1.366e-60
Identity = 108/131 (82.44%), Postives = 119/131 (90.84%), Query Frame = 2
Query:  188 VKGVPTHGGRYVQYNVYGNLFEVSRKYVPPIRPVGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTDLHQIIRSHQDLTDDHC 580
            +KG+PTH G+YV+YNV GN FEV+ KY+PPI+PVGRGAYG+VC A NSET+EEVAIKKIGNAF+NRIDAKRTLREIKLL HMDHENII IKDI+RPP RE FNDVYIVYELMDTDLHQIIRS Q LTDDHC
Sbjct:   11 IKGIPTHEGKYVEYNVLGNFFEVTSKYIPPIQPVGRGAYGMVCCATNSETKEEVAIKKIGNAFENRIDAKRTLREIKLLSHMDHENIIKIKDIVRPPDREEFNDVYIVYELMDTDLHQIIRSSQALTDDHC 141          
BLAST of CX289337 vs. ExPASy Swiss-Prot
Match: MPK5_ARATH (Mitogen-activated protein kinase 5 OS=Arabidopsis thaliana GN=MPK5 PE=2 SV=2)

HSP 1 Score: 231.876 bits (590), Expect = 1.784e-60
Identity = 109/142 (76.76%), Postives = 126/142 (88.73%), Query Frame = 2
Query:  155 ESSSGSGDHTIVKGVPTHGGRYVQYNVYGNLFEVSRKYVPPIRPVGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTDLHQIIRSHQDLTDDHC 580
            ES++  GD T +KGV  HGGRY QYNVYGNLFEVS KYVPPIRP+GRGAYG VCAA++SET EE+AIKKIG AFDN++DAKRTLREIKLLRH++HEN++ IKDIIRPP++E F DVYIV+ELMDTDLHQIIRS+Q L DDHC
Sbjct:    6 ESATDLGD-TNIKGVLVHGGRYFQYNVYGNLFEVSNKYVPPIRPIGRGAYGFVCAAVDSETHEEIAIKKIGKAFDNKVDAKRTLREIKLLRHLEHENVVVIKDIIRPPKKEDFVDVYIVFELMDTDLHQIIRSNQSLNDDHC 146          
BLAST of CX289337 vs. ExPASy Swiss-Prot
Match: MPK11_ARATH (Mitogen-activated protein kinase 11 OS=Arabidopsis thaliana GN=MPK11 PE=1 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 7.016e-57
Identity = 106/129 (82.17%), Postives = 117/129 (90.70%), Query Frame = 2
Query:  191 KGVPTHGGRYVQYNVYGNLFEVSRKYVPPIRPVGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTDLHQIIRSHQDLTDDH 577
            +GV  +GGRYVQYNVYGNLFEVS+KYVPP+RP+GRGA GIVCAA NSET EEVAIKKIGNAF N IDAKRTLREIKLL+HMDH+N+IAI DIIRPPQ + FNDV+IVYELMDTDLH IIRS+Q LTDDH
Sbjct:   14 RGVSINGGRYVQYNVYGNLFEVSKKYVPPLRPIGRGASGIVCAAWNSETGEEVAIKKIGNAFGNIIDAKRTLREIKLLKHMDHDNVIAIIDIIRPPQPDNFNDVHIVYELMDTDLHHIIRSNQPLTDDH 142          
BLAST of CX289337 vs. ExPASy Swiss-Prot
Match: NTF4_TOBAC (Mitogen-activated protein kinase homolog NTF4 OS=Nicotiana tabacum GN=NTF4 PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 2.041e-56
Identity = 98/126 (77.78%), Postives = 116/126 (92.06%), Query Frame = 2
Query:  203 THGGRYVQYNVYGNLFEVSRKYVPPIRPVGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTDLHQIIRSHQDLTDDHC 580
            +HGGR++QYN++GN+FEV+ KY PPI P+G+GAYGIVC+A+NSET E VAIKKI NAFDN+IDAKRTLREIKLLRHMDHENI+AI+DII PPQRE FNDVYI YELMDTDLHQIIRS+Q L+++HC
Sbjct:   38 SHGGRFIQYNIFGNIFEVTAKYKPPIMPIGKGAYGIVCSALNSETNEHVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENIVAIRDIIPPPQREAFNDVYIAYELMDTDLHQIIRSNQGLSEEHC 163          
BLAST of CX289337 vs. ExPASy Swiss-Prot
Match: MPK1_ORYSJ (Mitogen-activated protein kinase 1 OS=Oryza sativa subsp. japonica GN=MPK1 PE=1 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 2.041e-56
Identity = 99/141 (70.21%), Postives = 124/141 (87.94%), Query Frame = 2
Query:  158 SSSGSGDHTIVKGVPTHGGRYVQYNVYGNLFEVSRKYVPPIRPVGRGAYGIVCAAMNSETREEVAIKKIGNAFDNRIDAKRTLREIKLLRHMDHENIIAIKDIIRPPQRETFNDVYIVYELMDTDLHQIIRSHQDLTDDHC 580
            + +G+G    ++   +HGGR++QYN++GN+FEV+ KY PPI P+G+GAYGIVC+A+NSET E+VAIKKI NAFDN+IDAKRTLREIKLLRHMDHENI+AI+DII PPQR +FNDVYI YELMDTDLHQIIRS+Q L+++HC
Sbjct:   30 AGAGAGMMENIQATLSHGGRFIQYNIFGNVFEVTAKYKPPILPIGKGAYGIVCSALNSETGEQVAIKKIANAFDNKIDAKRTLREIKLLRHMDHENIVAIRDIIPPPQRNSFNDVYIAYELMDTDLHQIIRSNQALSEEHC 170          
The following BLAST results are available for this feature:
BLAST of CX289337 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 187
Match NameE-valueIdentityDescription
MPK4_ARATH5.726e-6784.93Mitogen-activated protein kinase 4 OS=Arabidopsis ... [more]
MMK2_MEDSA2.037e-6481.38Mitogen-activated protein kinase homolog MMK2 OS=M... [more]
MPK12_ARATH1.011e-6382.76Mitogen-activated protein kinase 12 OS=Arabidopsis... [more]
MPK6_ORYSJ3.841e-6380.56Mitogen-activated protein kinase 6 OS=Oryza sativa... [more]
MPK2_ORYSJ3.252e-6277.62Mitogen-activated protein kinase 2 OS=Oryza sativa... [more]
NTF6_TOBAC1.366e-6082.44Mitogen-activated protein kinase homolog NTF6 OS=N... [more]
MPK5_ARATH1.784e-6076.76Mitogen-activated protein kinase 5 OS=Arabidopsis ... [more]
MPK11_ARATH7.016e-5782.17Mitogen-activated protein kinase 11 OS=Arabidopsis... [more]
NTF4_TOBAC2.041e-5677.78Mitogen-activated protein kinase homolog NTF4 OS=N... [more]
MPK1_ORYSJ2.041e-5670.21Mitogen-activated protein kinase 1 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionC02011H02SK IF1 Citrus clementina cDNA clone C02011H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289337 ID=CX289337; Name=CX289337; organism=Citrus clementina; type=EST; length=580bp
TGTCAAAGCCCTTTCCACCTACCGACACGCCCTCCTAAAATTTAGTAGCT
CTTTCCTCGAAATTGGTTCTCCTTCTCGTTCCAATTTTCAGGAAAAATCC
TTGTCGGGTTCGGATTCGGATACCGTATTCGGGGCCAACAGAATCATGTC
AGGAGAGTCGAGCTCCGGTTCGGGTGATCATACTATTGTCAAAGGAGTTC
CGACTCATGGGGGACGTTACGTGCAGTATAATGTGTACGGTAACCTTTTC
GAAGTTTCTAGAAAGTATGTCCCTCCTATACGCCCCGTTGGCAGAGGCGC
TTATGGTATTGTGTGTGCTGCTATGAATTCGGAGACTCGGGAAGAGGTTG
CCATTAAGAAAATTGGCAATGCATTTGATAATAGAATTGATGCCAAGAGG
ACTTTGCGAGAAATTAAGCTGCTTCGTCACATGGATCATGAAAATATTAT
TGCCATCAAAGACATCATACGACCACCACAGAGGGAGACCTTCAATGATG
TATACATAGTTTATGAATTGATGGACACTGATCTCCATCAAATCATCCGT
TCCCATCAAGATCTGACAGATGATCATTGT
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