CX289378

Overview
NameCX289378
Unique NameCX289378
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length359
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX289378 vs. ExPASy Swiss-Prot
Match: SAHH1_ARATH (Adenosylhomocysteinase 1 OS=Arabidopsis thaliana GN=SAHH1 PE=1 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 3.558e-61
Identity = 113/119 (94.96%), Postives = 117/119 (98.32%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 359
            L+ DPKKYHKMKERLVGVSEETTTGVKRLYQMQ+NGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAV+CGYGDVGKGCAAA+K AGARVIVTEIDPICALQALM
Sbjct:  185 LQVDPKKYHKMKERLVGVSEETTTGVKRLYQMQQNGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQALM 303
[Close]
BLAST of CX289378 vs. ExPASy Swiss-Prot
Match: SAHH2_ARATH (Adenosylhomocysteinase 2 OS=Arabidopsis thaliana GN=SAHH2 PE=1 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 3.012e-60
Identity = 112/119 (94.12%), Postives = 115/119 (96.64%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 359
            L+ DPKKYHKMKERLVGVSEETTTGVKRLYQMQE G LLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAV+CGYGDVGKGCAAA+K AGARVIVTEIDPICALQALM
Sbjct:  185 LQVDPKKYHKMKERLVGVSEETTTGVKRLYQMQETGALLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKTAGARVIVTEIDPICALQALM 303
[Close]
BLAST of CX289378 vs. ExPASy Swiss-Prot
Match: SAHH_WHEAT (Adenosylhomocysteinase OS=Triticum aestivum GN=SAHH PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 5.137e-60
Identity = 114/119 (95.80%), Postives = 115/119 (96.64%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 359
            LK D  KY KMKERLVGVSEETTTGVKRLYQMQE+GTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM
Sbjct:  185 LKTDASKYRKMKERLVGVSEETTTGVKRLYQMQESGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 303
[Close]
BLAST of CX289378 vs. ExPASy Swiss-Prot
Match: SAHH_LUPLU (Adenosylhomocysteinase OS=Lupinus luteus GN=SAHH PE=2 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 1.144e-59
Identity = 112/119 (94.12%), Postives = 115/119 (96.64%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 359
            LK DPK+YHKMK+R+VGVSEETTTGVKRLYQMQ NGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVV GYGDVGKGCAAALKQAGARVIVTEIDPICALQA M
Sbjct:  185 LKTDPKRYHKMKDRVVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATM 303
[Close]
BLAST of CX289378 vs. ExPASy Swiss-Prot
Match: SAHH_PETCR (Adenosylhomocysteinase OS=Petroselinum crispum GN=SAHH PE=2 SV=2)

HSP 1 Score: 227.254 bits (578), Expect = 1.952e-59
Identity = 110/119 (92.44%), Postives = 116/119 (97.48%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 359
            LK+DP KYHKMK+RLVGVSEETTTGVKRLYQMQ+NGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVA++ GYGDVGKGCAAA+KQAGARVIVTEIDPICALQA M
Sbjct:  185 LKSDPMKYHKMKDRLVGVSEETTTGVKRLYQMQQNGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVALIAGYGDVGKGCAAAMKQAGARVIVTEIDPICALQATM 303
[Close]
BLAST of CX289378 vs. ExPASy Swiss-Prot
Match: SAHH_MEDSA (Adenosylhomocysteinase OS=Medicago sativa GN=SAHH PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 4.349e-59
Identity = 111/119 (93.28%), Postives = 114/119 (95.80%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 359
            LK DPK+Y KMK R+VGVSEETTTGVKRLYQMQ +GTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQ GARVIVTEIDPICALQALM
Sbjct:  185 LKTDPKRYQKMKTRIVGVSEETTTGVKRLYQMQASGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQGGARVIVTEIDPICALQALM 303
[Close]
BLAST of CX289378 vs. ExPASy Swiss-Prot
Match: SAHH_MESCR (Adenosylhomocysteinase OS=Mesembryanthemum crystallinum GN=SAHH PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 7.418e-59
Identity = 111/119 (93.28%), Postives = 112/119 (94.12%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 359
            LK DPK+YHKMK RLVGVSEETTTGVKRLYQMQ  GTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKV VVCGYGDVGKGCA ALK AGARVIVTEIDPICALQALM
Sbjct:  185 LKVDPKRYHKMKTRLVGVSEETTTGVKRLYQMQATGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVGVVCGYGDVGKGCALALKAAGARVIVTEIDPICALQALM 303
[Close]
BLAST of CX289378 vs. ExPASy Swiss-Prot
Match: SAHH_CATRO (Adenosylhomocysteinase OS=Catharanthus roseus GN=SAHH PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 1.265e-58
Identity = 112/119 (94.12%), Postives = 114/119 (95.80%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 359
            LK+DP KY +MKERLVGVSEETTTGVKRLYQMQ NGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVV GYGDVGKGCAAALKQAGARVIVTEIDPICALQA M
Sbjct:  185 LKSDPTKYTRMKERLVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATM 303
[Close]
BLAST of CX289378 vs. ExPASy Swiss-Prot
Match: SAHH_TOBAC (Adenosylhomocysteinase OS=Nicotiana tabacum GN=SAHH PE=2 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 2.158e-58
Identity = 112/119 (94.12%), Postives = 113/119 (94.96%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 359
            LK DP KY KMKERLVGVSEETTTGVKRLYQMQ NGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVA+V GYGDVGKGCAAALKQAGARVIVTEIDPICALQA M
Sbjct:  185 LKTDPLKYTKMKERLVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVALVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATM 303
[Close]
BLAST of CX289378 vs. ExPASy Swiss-Prot
Match: SAHH_NICSY (Adenosylhomocysteinase OS=Nicotiana sylvestris GN=SAHH PE=2 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 2.158e-58
Identity = 112/119 (94.12%), Postives = 113/119 (94.96%), Query Frame = 3 
Query:    3 LKADPKKYHKMKERLVGVSEETTTGVKRLYQMQENGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVAVVCGYGDVGKGCAAALKQAGARVIVTEIDPICALQALM 359
            LK DP KY KMKERLVGVSEETTTGVKRLYQMQ NGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVA+V GYGDVGKGCAAALKQAGARVIVTEIDPICALQA M
Sbjct:  185 LKTDPLKYTKMKERLVGVSEETTTGVKRLYQMQANGTLLFPAINVNDSVTKSKFDNLYGCRHSLPDGLMRATDVMIAGKVALVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQATM 303
The following BLAST results are available for this feature:
BLAST of CX289378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 244
Match NameE-valueIdentityDescription
SAHH1_ARATH3.558e-6194.96Adenosylhomocysteinase 1 OS=Arabidopsis thaliana G... [more]
SAHH2_ARATH3.012e-6094.12Adenosylhomocysteinase 2 OS=Arabidopsis thaliana G... [more]
SAHH_WHEAT5.137e-6095.80Adenosylhomocysteinase OS=Triticum aestivum GN=SAH... [more]
SAHH_LUPLU1.144e-5994.12Adenosylhomocysteinase OS=Lupinus luteus GN=SAHH P... [more]
SAHH_PETCR1.952e-5992.44Adenosylhomocysteinase OS=Petroselinum crispum GN=... [more]
SAHH_MEDSA4.349e-5993.28Adenosylhomocysteinase OS=Medicago sativa GN=SAHH ... [more]
SAHH_MESCR7.418e-5993.28Adenosylhomocysteinase OS=Mesembryanthemum crystal... [more]
SAHH_CATRO1.265e-5894.12Adenosylhomocysteinase OS=Catharanthus roseus GN=S... [more]
SAHH_TOBAC2.158e-5894.12Adenosylhomocysteinase OS=Nicotiana tabacum GN=SAH... [more]
SAHH_NICSY2.158e-5894.12Adenosylhomocysteinase OS=Nicotiana sylvestris GN=... [more]

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Properties
Property NameValue
Genbank descriptionC02012D05SK IF1 Citrus clementina cDNA clone C02012D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289378 ID=CX289378; Name=CX289378; organism=Citrus clementina; type=EST; length=359bp
GGTTGAAGGCCGATCCCAAGAAGTACCACAAAATGAAGGAAAGATTAGTT
GGTGTTTCCGAAGAAACCACGACCGGTGTCAAGAGATTGTATCAGATGCA
AGAAAATGGAACCCTCTTGTTCCCTGCCATCAATGTCAATGACTCTGTCA
CCAAGAGCAAGTTTGATAACTTGTATGGATGCCGCCACTCGCTCCCAGAT
GGTTTGATGAGAGCTACTGATGTTATGATTGCCGGAAAGGTTGCTGTTGT
TTGCGGTTATGGTGATGTTGGCAAGGGTTGTGCTGCTGCTTTGAAGCAAG
CCGGCGCTCGTGTAATTGTTACCGAGATTGATCCAATTTGCGCTCTCCAG
GCTCTTATG
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