CX289387
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289387 vs. ExPASy Swiss-Prot
Match: RIR1_ARATH (Ribonucleoside-diphosphate reductase large subunit OS=Arabidopsis thaliana GN=RNR1 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 9.929e-24 Identity = 48/60 (80.00%), Postives = 54/60 (90.00%), Query Frame = 3 Query: 3 HALKTSSEIAAKEGPYETYHNSPVSKGIIQPDMWNVIPSDRWDWGVLKDMISKNGLRNPL 182 HALK S+E+AA+ GPYETY SPVSKGI+QPDMWNVIPSDRWDW VL+DMISKNG+RN L Sbjct: 557 HALKASTELAARLGPYETYAGSPVSKGILQPDMWNVIPSDRWDWAVLRDMISKNGVRNSL 616
BLAST of CX289387 vs. ExPASy Swiss-Prot
Match: RIR1_HUMAN (Ribonucleoside-diphosphate reductase large subunit OS=Homo sapiens GN=RRM1 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.002e-17 Identity = 37/59 (62.71%), Postives = 47/59 (79.66%), Query Frame = 3 Query: 6 ALKTSSEIAAKEGPYETYHNSPVSKGIIQPDMWNVIPSDRWDWGVLKDMISKNGLRNPL 182 AL+ S ++A ++GPYETY SPVSKGI+Q DMWNV P+D WDW VLK+ I+K G+RN L Sbjct: 539 ALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTDLWDWKVLKEKIAKYGIRNSL 597
BLAST of CX289387 vs. ExPASy Swiss-Prot
Match: RIR1_PONAB (Ribonucleoside-diphosphate reductase large subunit OS=Pongo abelii GN=RRM1 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.005e-16 Identity = 36/59 (61.02%), Postives = 47/59 (79.66%), Query Frame = 3 Query: 6 ALKTSSEIAAKEGPYETYHNSPVSKGIIQPDMWNVIPSDRWDWGVLKDMISKNGLRNPL 182 AL+ S ++A ++GPYETY SPVSKGI+Q DMWNV P+D WDW +LK+ I+K G+RN L Sbjct: 539 ALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTDLWDWKLLKEKIAKYGIRNSL 597
BLAST of CX289387 vs. ExPASy Swiss-Prot
Match: RIR1_MOUSE (Ribonucleoside-diphosphate reductase large subunit OS=Mus musculus GN=Rrm1 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 5.835e-16 Identity = 37/59 (62.71%), Postives = 45/59 (76.27%), Query Frame = 3 Query: 6 ALKTSSEIAAKEGPYETYHNSPVSKGIIQPDMWNVIPSDRWDWGVLKDMISKNGLRNPL 182 AL+ S E+A + GPYETY SPVSKGI+Q DMWNV P+D WDW LK+ I+K G+RN L Sbjct: 539 ALEASCELAKEYGPYETYEGSPVSKGILQYDMWNVAPTDLWDWKPLKEKIAKYGIRNSL 597
BLAST of CX289387 vs. ExPASy Swiss-Prot
Match: RIR1_SCHPO (Ribonucleoside-diphosphate reductase large chain OS=Schizosaccharomyces pombe GN=cdc22 PE=1 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 1.100e-14 Identity = 35/59 (59.32%), Postives = 44/59 (74.58%), Query Frame = 3 Query: 6 ALKTSSEIAAKEGPYETYHNSPVSKGIIQPDMWNVIPSDRWDWGVLKDMISKNGLRNPL 182 AL+ S EIA EG YE+Y SP S+GI+Q DMWNV P+D WDW LK+ I+K+G+RN L Sbjct: 538 ALEASCEIAQVEGTYESYEGSPASQGILQYDMWNVNPTDLWDWAELKEKIAKHGIRNSL 596
BLAST of CX289387 vs. ExPASy Swiss-Prot
Match: RIR1_DROME (Ribonucleoside-diphosphate reductase large subunit OS=Drosophila melanogaster GN=RnrL PE=1 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 1.877e-14 Identity = 34/59 (57.63%), Postives = 44/59 (74.58%), Query Frame = 3 Query: 6 ALKTSSEIAAKEGPYETYHNSPVSKGIIQPDMWNVIPSDRWDWGVLKDMISKNGLRNPL 182 AL+ S E+A EGPYETY SPVSKGI+Q DMW+ +P++ WDW LK+ I +G+RN L Sbjct: 550 ALEASCELAQTEGPYETYEGSPVSKGILQYDMWDKVPTNLWDWQKLKESIRMHGVRNSL 608
BLAST of CX289387 vs. ExPASy Swiss-Prot
Match: RIR1_DANRE (Ribonucleoside-diphosphate reductase large subunit OS=Danio rerio GN=rrm1 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.202e-14 Identity = 33/59 (55.93%), Postives = 44/59 (74.58%), Query Frame = 3 Query: 6 ALKTSSEIAAKEGPYETYHNSPVSKGIIQPDMWNVIPSDRWDWGVLKDMISKNGLRNPL 182 AL++S E+AA+ GPY+TY PVSKGI+Q DMW P+D WDW LK+ I+ +G+RN L Sbjct: 539 ALESSCELAAEYGPYQTYAGCPVSKGILQYDMWEKTPTDLWDWAALKEKIANDGVRNSL 597
BLAST of CX289387 vs. ExPASy Swiss-Prot
Match: RIR1_VARV (Ribonucleoside-diphosphate reductase large subunit OS=Variola virus GN=I4L PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.461e-14 Identity = 35/59 (59.32%), Postives = 42/59 (71.19%), Query Frame = 3 Query: 6 ALKTSSEIAAKEGPYETYHNSPVSKGIIQPDMWNVIPSDRWDWGVLKDMISKNGLRNPL 182 AL+ S E+A KEGPY+TY S S GI+Q D+WNV+PSD W+W LKD I GLRN L Sbjct: 538 ALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNWEPLKDKIRTYGLRNSL 596
BLAST of CX289387 vs. ExPASy Swiss-Prot
Match: RIR1_VACCW (Ribonucleoside-diphosphate reductase large subunit OS=Vaccinia virus (strain Western Reserve) GN=VACWR073 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.461e-14 Identity = 35/59 (59.32%), Postives = 42/59 (71.19%), Query Frame = 3 Query: 6 ALKTSSEIAAKEGPYETYHNSPVSKGIIQPDMWNVIPSDRWDWGVLKDMISKNGLRNPL 182 AL+ S E+A KEGPY+TY S S GI+Q D+WNV+PSD W+W LKD I GLRN L Sbjct: 538 ALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNWEPLKDKIRTYGLRNSL 596
BLAST of CX289387 vs. ExPASy Swiss-Prot
Match: RIR1_VACCC (Ribonucleoside-diphosphate reductase large subunit OS=Vaccinia virus (strain Copenhagen) GN=I4L PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.461e-14 Identity = 35/59 (59.32%), Postives = 42/59 (71.19%), Query Frame = 3 Query: 6 ALKTSSEIAAKEGPYETYHNSPVSKGIIQPDMWNVIPSDRWDWGVLKDMISKNGLRNPL 182 AL+ S E+A KEGPY+TY S S GI+Q D+WNV+PSD W+W LKD I GLRN L Sbjct: 538 ALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNWEPLKDKIRTYGLRNSL 596 The following BLAST results are available for this feature:
BLAST of CX289387 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289387 ID=CX289387; Name=CX289387; organism=Citrus clementina; type=EST; length=183bpback to top |