CX289388

Overview
NameCX289388
Unique NameCX289388
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length365
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX289388 vs. ExPASy Swiss-Prot
Match: GDL79_ARATH (GDSL esterase/lipase At5g33370 OS=Arabidopsis thaliana GN=At5g33370 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 7.902e-45
Identity = 82/115 (71.30%), Postives = 101/115 (87.83%), Query Frame = 1
Query:    1 VNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQEINRKIGQTVFIAANTQQTHMDFISNP 345
            VNNYYLVP+SARSRQF+LP+YV ++ISEYRK+L ++Y+LGARRVLVTGTGP+GCVPAELA R  NG C+ ELQRA SL+NPQL QM+ ++N ++G + FIAANTQQ HMDFIS+P
Sbjct:  172 VNNYYLVPFSARSRQFSLPDYVVFVISEYRKVLRKMYDLGARRVLVTGTGPMGCVPAELAQRSRNGECATELQRAASLFNPQLIQMITDLNNEVGSSAFIAANTQQMHMDFISDP 286          
BLAST of CX289388 vs. ExPASy Swiss-Prot
Match: GDL77_ARATH (GDSL esterase/lipase At5g18430 OS=Arabidopsis thaliana GN=At5g18430 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 6.923e-41
Identity = 82/116 (70.69%), Postives = 95/116 (81.90%), Query Frame = 1
Query:    1 VNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRG-SNGGCSAELQRATSLYNPQLEQMLQEINRKIGQTVFIAANTQQTHMDFISNP 345
            VNNY+L PYSARSRQFTLP+YV+ +ISEY+K+L+RL  LG  RVLVTG GPLGC PAELA  G SNG CSAELQRA SLY+PQL QM+ E+N+KIG+ VFIAANT Q   DF+S P
Sbjct:  171 VNNYFLFPYSARSRQFTLPDYVRLLISEYKKILLRLNSLGVGRVLVTGAGPLGCAPAELARSGTSNGRCSAELQRAASLYDPQLLQMINELNKKIGRNVFIAANTNQMQEDFLSTP 286          
BLAST of CX289388 vs. ExPASy Swiss-Prot
Match: LTL1_ARATH (GDSL esterase/lipase LTL1 OS=Arabidopsis thaliana GN=LTL1 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 4.200e-38
Identity = 72/115 (62.61%), Postives = 90/115 (78.26%), Query Frame = 1
Query:    1 VNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQEINRKIGQTVFIAANTQQTHMDFISNP 345
            VNNYYL+P+SARSRQ+ LP+YV Y+ISEY K+L +LYELGARRVLVTGTG +GC PAELA    NG C   LQ A +L+NPQL  ++  +N +IGQ VF+AAN  Q +MD++SNP
Sbjct:  171 VNNYYLIPFSARSRQYALPDYVVYLISEYGKILRKLYELGARRVLVTGTGAMGCAPAELAQHSRNGECYGALQTAAALFNPQLVDLIASVNAEIGQDVFVAANAYQMNMDYLSNP 285          
BLAST of CX289388 vs. ExPASy Swiss-Prot
Match: GDL67_ARATH (GDSL esterase/lipase At4g28780 OS=Arabidopsis thaliana GN=At4g28780 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 4.498e-32
Identity = 70/116 (60.34%), Postives = 87/116 (75.00%), Query Frame = 1
Query:    1 VNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGS-NGGCSAELQRATSLYNPQLEQMLQEINRKIGQTVFIAANTQQTHMDFISNP 345
            VNNY+  P S R RQ +L  + + +ISEY+K+L  LYELGARRV+VTGTGPLGCVPAELA  GS NG C+ E Q+A +++NP L QMLQ +NR+IG  VFI AN   T+ DFI+NP
Sbjct:  173 VNNYFF-PISTRRRQSSLGEFSQLLISEYKKILTSLYELGARRVMVTGTGPLGCVPAELASSGSVNGECAPEAQQAAAIFNPLLVQMLQGLNREIGSDVFIGANAFNTNADFINNP 287          
BLAST of CX289388 vs. ExPASy Swiss-Prot
Match: GDL37_ARATH (GDSL esterase/lipase At2g19060 OS=Arabidopsis thaliana GN=At2g19060 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.524e-14
Identity = 37/121 (30.58%), Postives = 61/121 (50.41%), Query Frame = 1
Query:    1 VNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQEINRKIGQTVFIAANTQQTHMDFISNPTSIRIY 363
            +NNY++      +  F+   Y  ++I  YR  L  LY LGAR+V V G   LGC P  +A  G   GC+ E+ +A   +N +L+ ++ E NR     + +  + + T +D  S+   I  +
Sbjct:  164 LNNYFMPAPYTTNENFSFDEYADFLIQSYRSYLKSLYVLGARKVAVFGVSKLGCTPRMIASHGGGKGCATEVNKAVEPFNKKLKDLISEFNR-----ISVVDHAKFTFVDLFSSQNPIEYF 279          
BLAST of CX289388 vs. ExPASy Swiss-Prot
Match: GDL14_ARATH (GDSL esterase/lipase At1g29660 OS=Arabidopsis thaliana GN=At1g29660 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 9.422e-14
Identity = 41/119 (34.45%), Postives = 62/119 (52.10%), Query Frame = 1
Query:    1 VNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGG--CSAELQRATSLYNPQLEQMLQEINRKIGQTVFIAANTQQTHMDFISNPTS 351
            +NNY++  + + SRQ+T   Y   +IS YR  L  LY  GAR+  + G G +GC P  LA +GS  G  C   +  A  ++N +L  M+Q++N       F   N      D I+NP++
Sbjct:  172 LNNYFMPQFYSTSRQYTPEQYADDLISRYRDQLNALYNYGARKFALVGIGAIGCSPNALA-QGSQDGTTCVERINSANRIFNNRLISMVQQLNNAHSDASFTYINAYGAFQDIIANPSA 289          
BLAST of CX289388 vs. ExPASy Swiss-Prot
Match: GDL36_ARATH (GDSL esterase/lipase At2g19050 OS=Arabidopsis thaliana GN=At2g19050 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.607e-13
Identity = 35/99 (35.35%), Postives = 52/99 (52.53%), Query Frame = 1
Query:    1 VNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQEINRKIGQTVF 297
            +NNY++      +++F+   Y   +I  YR  L  LY LGAR+V V G   LGC P  +A  G   GC+AE+ +A   +N  L+ ++ E NR      F
Sbjct:  165 LNNYFMPAPYMTNKKFSFDEYADSLIRSYRSYLKSLYVLGARKVAVFGVSKLGCTPRMIASHGGGNGCAAEVNKAVEPFNKNLKALVYEFNRDFADAKF 263          
BLAST of CX289388 vs. ExPASy Swiss-Prot
Match: GDL68_ARATH (GDSL esterase/lipase At4g30140 OS=Arabidopsis thaliana GN=At4g30140 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.099e-13
Identity = 36/95 (37.89%), Postives = 55/95 (57.89%), Query Frame = 1
Query:    1 VNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNGGCSAELQRATSLYNPQLEQMLQEINRKIG 285
            +NNY+L P +   R F    Y + +IS YR  L +LY LGAR V + G G +GC P  +A  G   GC+ E+ +A  ++N +L+ ++ + N K G
Sbjct:  167 LNNYFLSPPTLARRLFNPDQYARSLISLYRIYLTQLYVLGARNVALFGIGKIGCTPRIVATLGGGTGCAEEVNQAVIIFNTKLKALVTDFNNKPG 261          
BLAST of CX289388 vs. ExPASy Swiss-Prot
Match: GLIP7_ARATH (GDSL esterase/lipase 7 OS=Arabidopsis thaliana GN=GLIP7 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.676e-13
Identity = 33/118 (27.97%), Postives = 65/118 (55.08%), Query Frame = 1
Query:    1 VNNYYLVPYSARSRQFTLPNYVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSN--GGCSAELQRATSLYNPQLEQMLQEINRKIGQTVFIAANTQQTHMDFISNPT 348
            +NNY +    + S+ ++  +Y   +I      + RLY LGAR++++ G+GPLGC+P++L++   N   GC  ++    S++N +L+ +   +N  +  + F+  N      D + NP+
Sbjct:  172 INNYLMPERYSTSQTYSGEDYADLLIKTLSAQISRLYNLGARKMVLAGSGPLGCIPSQLSMVTGNNTSGCVTKINNMVSMFNSRLKDLANTLNTTLPGSFFVYQNVFDLFHDMVVNPS 289          
BLAST of CX289388 vs. ExPASy Swiss-Prot
Match: GDL64_ARATH (GDSL esterase/lipase At4g16230 OS=Arabidopsis thaliana GN=At4g16230 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 7.976e-13
Identity = 39/119 (32.77%), Postives = 67/119 (56.30%), Query Frame = 1
Query:    1 VNNYYLVPYSARSRQFTLPN-YVKYIISEYRKLLMRLYELGARRVLVTGTGPLGCVPAELALRGSNG-GCSAELQRATSLYNPQLEQMLQEINRKIGQTVFIAANTQQTHMDFISNPTS 351
            +NNY+    S   R+   P  +V  +IS++R  L RLY+LGAR+++V   GP+GC+P E     + G  C AE      +YN +L+ +++E+N+ +  + F+  +  +   D I N +S
Sbjct:  171 INNYFTPVISTLQRKVVAPEVFVDTMISKFRLQLTRLYQLGARKIVVINIGPIGCIPFERESDPAAGNNCLAEPNEVAQMYNLKLKTLVEELNKNLQGSRFVYGDVFRIVDDIIQNYSS 289          
The following BLAST results are available for this feature:
BLAST of CX289388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
GDL79_ARATH7.902e-4571.30GDSL esterase/lipase At5g33370 OS=Arabidopsis thal... [more]
GDL77_ARATH6.923e-4170.69GDSL esterase/lipase At5g18430 OS=Arabidopsis thal... [more]
LTL1_ARATH4.200e-3862.61GDSL esterase/lipase LTL1 OS=Arabidopsis thaliana ... [more]
GDL67_ARATH4.498e-3260.34GDSL esterase/lipase At4g28780 OS=Arabidopsis thal... [more]
GDL37_ARATH5.524e-1430.58GDSL esterase/lipase At2g19060 OS=Arabidopsis thal... [more]
GDL14_ARATH9.422e-1434.45GDSL esterase/lipase At1g29660 OS=Arabidopsis thal... [more]
GDL36_ARATH1.607e-1335.35GDSL esterase/lipase At2g19050 OS=Arabidopsis thal... [more]
GDL68_ARATH2.099e-1337.89GDSL esterase/lipase At4g30140 OS=Arabidopsis thal... [more]
GLIP7_ARATH4.676e-1327.97GDSL esterase/lipase 7 OS=Arabidopsis thaliana GN=... [more]
GDL64_ARATH7.976e-1332.77GDSL esterase/lipase At4g16230 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC02012E10SK IF1 Citrus clementina cDNA clone C02012E10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289388 ID=CX289388; Name=CX289388; organism=Citrus clementina; type=EST; length=365bp
GTGAATAACTATTACTTGGTTCCGTACTCTGCAAGATCTCGCCAATTCAC
TTTGCCCAATTATGTCAAGTATATCATCTCTGAGTACCGAAAATTATTAA
TGAGGTTATACGAATTGGGAGCACGTAGGGTTCTTGTGACGGGTACCGGA
CCACTGGGTTGTGTTCCAGCAGAGCTGGCCCTGAGGGGTTCCAACGGTGG
ATGCTCAGCTGAACTGCAAAGAGCCACATCCTTGTACAACCCGCAACTTG
AACAAATGCTACAAGAAATAAACAGAAAAATTGGTCAAACCGTCTTCATT
GCCGCAAATACTCAACAGACGCACATGGATTTCATAAGCAACCCCACAAG
CATACGGATTTACAA
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