CX289405

Overview
NameCX289405
Unique NameCX289405
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length390
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX289405 vs. ExPASy Swiss-Prot
Match: PER15_IPOBA (Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.373e-11
Identity = 31/45 (68.89%), Postives = 36/45 (80.00%), Query Frame = -1 
Query:  256 AIVEDFGRNQTAFFKNFVISMIRMGNLKPLTGNQGEIRLNCRRVN 390
            AIV +F  NQTAFF++FV SMI MGN+ PLTG+ GEIR NCRR N
Sbjct:  283 AIVNNFSANQTAFFESFVQSMINMGNISPLTGSNGEIRSNCRRPN 327
The following BLAST results are available for this feature:
BLAST of CX289405 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PER15_IPOBA4.373e-1168.89Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1[more]
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Properties
Property NameValue
Genbank descriptionC02012G08SK IF1 Citrus clementina cDNA clone C02012G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289405 ID=CX289405; Name=CX289405; organism=Citrus clementina; type=EST; length=390bp
GAACACAAAAACACAAGTTTAATTAATTTATTTGAAAATACATAGCATGT
TTCAGACAAGAAAATTAGATTAAACTCAAGTTTGATAGTTAATTTATTTG
AAAACACATAACATGTTTCAGGCCAAACGATAAGATTAAATTCGAGTTTG
TTAAGCACAAAAACTCTCTCGCATATGCCGCAAGCTAGCTTATTAGAAAG
AGCTGACCAAATCACCCTCCGATGATGATGATCTTGTTGCAATATTATTG
TTTCCATTGACCCTCCTGCAGTTCAATCTAATCTCCCCTTGATTTCCTGT
CAGTGGTTTCAAATTGCCCATTCTTATCATTGAGATCACAAAGTTTTTAA
AGAAAGCAGTCTGGTTCCTCCCAAAGTCCTCGACAATGGC
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