CX289410

Overview
NameCX289410
Unique NameCX289410
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length399
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX289410 vs. ExPASy Swiss-Prot
Match: 6PGL4_ORYSJ (Probable 6-phosphogluconolactonase 4, chloroplastic OS=Oryza sativa subsp. japonica GN=Os09g0529100 PE=2 SV=2)

HSP 1 Score: 202.216 bits (513), Expect = 6.616e-52
Identity = 95/128 (74.22%), Postives = 112/128 (87.50%), Query Frame = 3 
Query:   15 SSSMAAENKNKNKNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAED 398
            +++ AA    K K V +FD+EEDLAVSLAKYTA+LSAK   E+G+FTVVLSGGSLI ++RKL EPPY+DS++W+KWHVFWVDERVVPKDH+DSNYKLA DGFLS+VPI TG VYAINDALSAEGAA+D
Sbjct:   61 AAAAAAAGSKKKKEVLIFDAEEDLAVSLAKYTAELSAKLAAERGAFTVVLSGGSLIKNIRKLAEPPYLDSVDWSKWHVFWVDERVVPKDHEDSNYKLALDGFLSKVPIPTGQVYAINDALSAEGAADD 188
[Close]
BLAST of CX289410 vs. ExPASy Swiss-Prot
Match: 6PGL4_ORYSI (Probable 6-phosphogluconolactonase 4, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_031067 PE=3 SV=2)

HSP 1 Score: 202.216 bits (513), Expect = 6.616e-52
Identity = 95/128 (74.22%), Postives = 112/128 (87.50%), Query Frame = 3 
Query:   15 SSSMAAENKNKNKNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAED 398
            +++ AA    K K V +FD+EEDLAVSLAKYTA+LSAK   E+G+FTVVLSGGSLI ++RKL EPPY+DS++W+KWHVFWVDERVVPKDH+DSNYKLA DGFLS+VPI TG VYAINDALSAEGAA+D
Sbjct:   61 AAAAAAAGSKKKKEVLIFDAEEDLAVSLAKYTAELSAKLAAERGAFTVVLSGGSLIKNIRKLAEPPYLDSVDWSKWHVFWVDERVVPKDHEDSNYKLALDGFLSKVPIPTGQVYAINDALSAEGAADD 188
[Close]
BLAST of CX289410 vs. ExPASy Swiss-Prot
Match: 6PGL5_ARATH (Probable 6-phosphogluconolactonase 5, chloroplastic OS=Arabidopsis thaliana GN=EMB2024 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 1.168e-48
Identity = 93/128 (72.66%), Postives = 109/128 (85.16%), Query Frame = 3 
Query:   21 SMAAEN--KNKNKNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAED 398
            SMA  N  K + K V+++D EE+L + LAK+TADLS KF KE+G+FTVV+SGGSLI SLRKLVE PYVDSI+WA+WH FWVDERVVPK+HDDSNYKLAYD FLS+VPI  GNVYAIN+ALSAE AA+D
Sbjct:   69 SMATTNIGKEEKKRVEIYDLEENLVIDLAKFTADLSDKFCKERGAFTVVVSGGSLIKSLRKLVESPYVDSIDWARWHFFWVDERVVPKNHDDSNYKLAYDSFLSKVPIPPGNVYAINEALSAEAAADD 196
[Close]
BLAST of CX289410 vs. ExPASy Swiss-Prot
Match: 6PGL3_ORYSJ (Probable 6-phosphogluconolactonase 3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os08g0547100 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 4.023e-41
Identity = 79/116 (68.10%), Postives = 95/116 (81.90%), Query Frame = 3 
Query:   51 KNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAED 398
            K + +FD+EE LA SLAKYTA LS +   E+G+FTV LSGGSLI +LRKL E PY++++EW+KWHVFWVDERVVPKDH DSNYKLA DG LS+VPI    +YAIND LSAEGAA++
Sbjct:   76 KKLLIFDAEEYLAESLAKYTARLSGEAVAERGAFTVALSGGSLIKALRKLTESPYLEAVEWSKWHVFWVDERVVPKDHADSNYKLAMDGLLSKVPIPASQIYAINDTLSAEGAADE 191
[Close]
BLAST of CX289410 vs. ExPASy Swiss-Prot
Match: 6PGL3_ORYSI (Probable 6-phosphogluconolactonase 3, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_30141 PE=3 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 4.023e-41
Identity = 79/116 (68.10%), Postives = 95/116 (81.90%), Query Frame = 3 
Query:   51 KNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAED 398
            K + +FD+EE LA SLAKYTA LS +   E+G+FTV LSGGSLI +LRKL E PY++++EW+KWHVFWVDERVVPKDH DSNYKLA DG LS+VPI    +YAIND LSAEGAA++
Sbjct:   76 KKLLIFDAEEYLAESLAKYTARLSGEAVAERGAFTVALSGGSLIKALRKLTESPYLEAVEWSKWHVFWVDERVVPKDHADSNYKLAMDGLLSKVPIPASQIYAINDTLSAEGAADE 191
[Close]
BLAST of CX289410 vs. ExPASy Swiss-Prot
Match: 6PGL2_ARATH (Probable 6-phosphogluconolactonase 2 OS=Arabidopsis thaliana GN=At3g49360 PE=2 SV=2)

HSP 1 Score: 160.229 bits (404), Expect = 2.883e-39
Identity = 76/112 (67.86%), Postives = 91/112 (81.25%), Query Frame = 3 
Query:   60 QVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAE 395
            +VF +  ++AV LAKYTADLS+KF KE+G FTVVLSGG LI  L KL+E PY+DSIEW+KWH+FWVDERV   DH DSNYKLAYDGFLS+VP+   N+YAI++ L AEG AE
Sbjct:    7 RVFKTNNEMAVELAKYTADLSSKFCKERGVFTVVLSGGDLIAWLWKLLEAPYIDSIEWSKWHIFWVDERVCAWDHADSNYKLAYDGFLSKVPVPAENIYAIDNGLGAEGNAE 118
[Close]
BLAST of CX289410 vs. ExPASy Swiss-Prot
Match: 6PGL4_ARATH (Probable 6-phosphogluconolactonase 4 OS=Arabidopsis thaliana GN=At5g24410 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 2.984e-36
Identity = 72/119 (60.50%), Postives = 95/119 (79.83%), Query Frame = 3 
Query:   39 KNKNKNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAE 395
            K K+K + VF ++++L+ ++A YTA+LSAKF KE+G FTVVLSGG LI  L +L+EP Y +SIEW+KWH+FWVDERVVP DH+DSNYKLA+DGFLS+VPI   N+Y I+   +A G A+
Sbjct:    7 KTKSKKI-VFPTKKELSEAMATYTANLSAKFCKERGYFTVVLSGGDLISWLSELLEPKYQESIEWSKWHIFWVDERVVPLDHEDSNYKLAFDGFLSKVPIPIANIYPIDKDCAALGDAK 124
[Close]
BLAST of CX289410 vs. ExPASy Swiss-Prot
Match: 6PGL3_ARATH (Probable 6-phosphogluconolactonase 3 OS=Arabidopsis thaliana GN=At5g24420 PE=2 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 3.897e-36
Identity = 73/111 (65.77%), Postives = 90/111 (81.08%), Query Frame = 3 
Query:   63 VFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAE 395
            VF ++ +L+ ++A+YTA+LSAKF KEKG FTVVLSGG LID L KLV+PPY+DSIEW KWHVFWVDERV   +  DSNYKLA +GFLS+VPI   N+YAI+  L+A+G AE
Sbjct:    8 VFPTKNELSEAMAEYTANLSAKFIKEKGLFTVVLSGGDLIDWLCKLVQPPYIDSIEWPKWHVFWVDERVCAWEDPDSNYKLAMEGFLSKVPIPDKNIYAIDKHLAADGNAE 118
[Close]
BLAST of CX289410 vs. ExPASy Swiss-Prot
Match: 6PGL1_ARATH (Probable 6-phosphogluconolactonase 1 OS=Arabidopsis thaliana GN=At1g13700 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 4.614e-29
Identity = 59/114 (51.75%), Postives = 83/114 (72.81%), Query Frame = 3 
Query:   57 VQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAED 398
            ++V ++ E+L++ L  Y A++S    KE G+F +VLSGGSLI  + KL+EPPY   ++WAKW+VFW DERVV K+HDDSNYKLA D  LS+V +   ++ +IND +SAE AA +
Sbjct:   13 IRVHENLEELSIDLVDYIAEISEASIKEHGAFCIVLSGGSLISFMGKLIEPPYDKIVDWAKWYVFWADERVVAKNHDDSNYKLAKDNLLSKVNVFPRHICSINDTVSAEEAATE 126
[Close]
BLAST of CX289410 vs. ExPASy Swiss-Prot
Match: 6PGL1_ORYSJ (Probable 6-phosphogluconolactonase 1 OS=Oryza sativa subsp. japonica GN=Os03g0416500 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 7.870e-29
Identity = 57/125 (45.60%), Postives = 85/125 (68.00%), Query Frame = 3 
Query:   24 MAAENKNKNKNVQVFDSEEDLAVSLAKYTADLSAKFGKEKGSFTVVLSGGSLIDSLRKLVEPPYVDSIEWAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSQVPITTGNVYAINDALSAEGAAED 398
            +A+    KN  +++F+S +++A  LA+Y + +S    KE+G F + LSGG LI  +RKL E PY  +++W+KW++FW DER V K+H DS YK   + FLS+VPI  G+VY+IND ++ E AA D
Sbjct:   23 VASYEPKKNNEIRMFESSDEMATDLAEYISQVSEISIKERGYFAIALSGGPLISFMRKLCEAPYNKTLDWSKWYIFWADERAVAKNHVDSYYKSTKEDFLSKVPILNGHVYSINDNVTVEDAATD 147
The following BLAST results are available for this feature:
BLAST of CX289410 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
6PGL4_ORYSJ6.616e-5274.22Probable 6-phosphogluconolactonase 4, chloroplasti... [more]
6PGL4_ORYSI6.616e-5274.22Probable 6-phosphogluconolactonase 4, chloroplasti... [more]
6PGL5_ARATH1.168e-4872.66Probable 6-phosphogluconolactonase 5, chloroplasti... [more]
6PGL3_ORYSJ4.023e-4168.10Probable 6-phosphogluconolactonase 3, chloroplasti... [more]
6PGL3_ORYSI4.023e-4168.10Probable 6-phosphogluconolactonase 3, chloroplasti... [more]
6PGL2_ARATH2.883e-3967.86Probable 6-phosphogluconolactonase 2 OS=Arabidopsi... [more]
6PGL4_ARATH2.984e-3660.50Probable 6-phosphogluconolactonase 4 OS=Arabidopsi... [more]
6PGL3_ARATH3.897e-3665.77Probable 6-phosphogluconolactonase 3 OS=Arabidopsi... [more]
6PGL1_ARATH4.614e-2951.75Probable 6-phosphogluconolactonase 1 OS=Arabidopsi... [more]
6PGL1_ORYSJ7.870e-2945.60Probable 6-phosphogluconolactonase 1 OS=Oryza sati... [more]

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Properties
Property NameValue
Genbank descriptionC02012H01SK IF1 Citrus clementina cDNA clone C02012H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX289410 ID=CX289410; Name=CX289410; organism=Citrus clementina; type=EST; length=399bp
TGAGAATCAAGGCATCATCATCAATGGCTGCCGAGAATAAGAACAAGAAC
AAGAACGTACAAGTTTTTGACTCAGAGGAAGATCTGGCTGTGTCTTTGGC
CAAATACACCGCCGATCTATCTGCCAAGTTCGGTAAAGAGAAGGGCTCCT
TCACTGTCGTCTTATCCGGTGGTTCTCTCATCGACTCCCTCAGGAAATTA
GTGGAACCCCCGTATGTAGATTCAATTGAATGGGCGAAATGGCATGTGTT
TTGGGTTGATGAAAGAGTTGTTCCCAAGGATCATGATGATAGCAATTATA
AGCTTGCTTATGATGGTTTCCTTTCTCAGGTACCAATTACCACTGGCAAT
GTCTATGCCATCAATGATGCATTATCTGCTGAAGGTGCAGCTGAAGATT
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