CX289415
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289415 vs. ExPASy Swiss-Prot
Match: CAF1B_HUMAN (Chromatin assembly factor 1 subunit B OS=Homo sapiens GN=CHAF1B PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 5.728e-19 Identity = 53/148 (35.81%), Postives = 81/148 (54.73%), Query Frame = 3 Query: 24 MKGGTLQINWHDTKPVLTLDF-HPISGL---LATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAVNILRFSPCGEQLASGADGGELIIWKLHTTE---------------TGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLS 410 MK T +I WH+ +PV +LDF H +G LA+ G D +++IW + G K I + ++L+ H AVN++RFSP GE LASG D +++WK++ + + W V+K L H +DV D+ W+TDG + S Sbjct: 1 MKVITCEIAWHNKEPVYSLDFQHGTAGRIHRLASAGVDTNVRIWKVEKGPDGKAI--VEFLSNLARHTKAVNVVRFSPTGEILASGGDDAVILLWKVNDNKEPEQIAFQDEDEAQLNKENWTVVKTLRGHLEDVYDICWATDGNLMAS 146
BLAST of CX289415 vs. ExPASy Swiss-Prot
Match: CAF1B_CHICK (Chromatin assembly factor 1 subunit B OS=Gallus gallus GN=CHAF1B PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 7.480e-19 Identity = 52/148 (35.14%), Postives = 81/148 (54.73%), Query Frame = 3 Query: 24 MKGGTLQINWHDTKPVLTLDF-HPISGL---LATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAVNILRFSPCGEQLASGADGGELIIWKLHTTE---------------TGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLS 410 MK T +I WH+ +PV +LDF H G LA+ G D +++W + G K I + ++L+ H AVN++RFSP GE LASG D +++WKL+ ++ + W V+K L H +DV D+ W++DG ++ S Sbjct: 1 MKVITCEIAWHNKEPVYSLDFQHGTDGKINRLASAGVDTAVRVWKVEKGPDGKAI--VEFLSNLARHTKAVNVVRFSPSGEVLASGGDDAVILLWKLNDSKELEPLAFQDEDEAQLNKENWTVVKTLRGHLEDVYDICWTSDGNYMAS 146
BLAST of CX289415 vs. ExPASy Swiss-Prot
Match: CAF1B_MOUSE (Chromatin assembly factor 1 subunit B OS=Mus musculus GN=Chaf1b PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.080e-17 Identity = 51/148 (34.46%), Postives = 79/148 (53.38%), Query Frame = 3 Query: 24 MKGGTLQINWHDTKPVLTLDFHPISGL----LATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAVNILRFSPCGEQLASGADGGELIIWKLHTTE---------------TGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLS 410 MK T +I WH+ +PV +LDF + LA+ G D ++IW + G K I + ++L+ H AVN++RFSP GE LASG D +++WK++ ++ + W V+K L H +DV D+ W+TDG + S Sbjct: 1 MKVITCEIAWHNKEPVYSLDFQHGATWKIHRLASAGVDTAVRIWKLERGPDGKAI--VEFLSNLARHTKAVNVVRFSPTGEILASGGDDAVILLWKMNDSKEPEQIAFQDEEEAQLNKENWTVVKTLRGHLEDVYDICWATDGNLMTS 146
BLAST of CX289415 vs. ExPASy Swiss-Prot
Match: CAC2_YEAST (Chromatin assembly factor 1 subunit p60 OS=Saccharomyces cerevisiae GN=CAC2 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.463e-14 Identity = 39/107 (36.45%), Postives = 60/107 (56.07%), Query Frame = 3 Query: 24 MKGGTLQINWHDTKPVLTLDFHPISG--LLATGGADYDIKIWLINSGEKQ-----KKIPTASYQNSLSYHGSAVNILRFSPCGEQLASGADGGELIIWKLHTTETGQ 323 M+ LQI WHD++PV +L F S L T G D ++IW +N E +KI + + SL++H A+N++RF+ G+ LAS D G++++WK T Q Sbjct: 1 MEASHLQIYWHDSQPVYSLTFQKNSANDKLFTAGGDNKVRIWKLNRDENGQNGGVRKIESLDFLGSLTHHEQAINVIRFNSKGDVLASAGDDGQVLLWKQEDPNTQQ 107
BLAST of CX289415 vs. ExPASy Swiss-Prot
Match: YEG3_SCHPO (Uncharacterized WD repeat-containing protein C26H5.03 OS=Schizosaccharomyces pombe GN=SPAC26H5.03 PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 4.696e-13 Identity = 48/149 (32.21%), Postives = 70/149 (46.98%), Query Frame = 3 Query: 24 MKGGTLQINWH-----DTKPVLTLDFHPIS-GLLATGGADYDIKIWLINSGEKQKKIPTASYQNSLSYHGSAVNILRFSPCGEQLASGADGGELIIWKLHTTE-------------TGQAWKVLKNLSFHRKDVLDLQWSTDGAFLLSG 413 M+ LQI WH D P+ ++DF S AT G D I+IW + + E K+ Y ++LS H AVN++RF+P G LA+ D G +++W T + WKV ++ DL WS D FL++G Sbjct: 1 MRAEVLQIRWHYDANDDHTPIYSVDFQKNSLNKFATCGGDSKIRIWQLITSESSTKV---EYLSTLSRHTQAVNVVRFNPEGNILATAGDEGTIMLWVPTNTPITTLADDAEELALAKEYWKVKIVCRSMGSEIYDLCWSVDSNFLIAG 146
BLAST of CX289415 vs. ExPASy Swiss-Prot
Match: HIR1_KLULA (Protein HIR1 OS=Kluyveromyces lactis GN=HIR1 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.785e-12 Identity = 46/137 (33.58%), Postives = 66/137 (48.18%), Query Frame = 3 Query: 54 HDTKPVLTLDFHPISGLLATGGADYDIKIWLINSGEKQKKIPTASYQ--------NSLSYHGSAVNILRFSPCGEQLASGADGGELIIWKLHTTETG----------QAWKVLKNLSFHRKDVLDLQWSTDGAFLLS 410 H + V T D P S LATGG D I+IW I K P AS +++S H +V ++FSP G+ LASG+D L+IW+L T + W V + L H D+ D+ W+ D + ++S Sbjct: 15 HKSYEVYTCDVSPDSQRLATGGLDGKIRIWSIPDILKFASNPNASTDKDILMKPLSTMSRHAGSVTTVKFSPDGKYLASGSDDRILLIWELEGGTTQPMFGAESTDIEHWNVRRRLVAHDNDIQDICWAPDSSIMVS 151
BLAST of CX289415 vs. ExPASy Swiss-Prot
Match: HIR1_CANGA (Protein HIR1 OS=Candida glabrata GN=HIR1 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.741e-11 Identity = 41/129 (31.78%), Postives = 62/129 (48.06%), Query Frame = 3 Query: 69 VLTLDFHPISGLLATGGADYDIKIWLINS------GEKQKKIPTASYQNSLSYHGSAVNILRFSPCGEQLASGADGGELIIWKLHTTETG---------QAWKVLKNLSFHRKDVLDLQWSTDGAFLLS 410 + T+D P +ATGG D I+IW +++ GE T S+S H +V ++FSP G LASG+D L+IW + G + W V K L H D+ D+ W+ D + L++ Sbjct: 20 IYTVDVSPDGKRVATGGLDGKIRIWSVDALVSAAAGESGVDRDTHRPLASMSRHTGSVTCVKFSPDGNYLASGSDDRILLIWAMDEENHGGSFGSEGEKEHWTVRKRLVAHDNDIQDICWAPDSSILVT 148 The following BLAST results are available for this feature:
BLAST of CX289415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX289415 ID=CX289415; Name=CX289415; organism=Citrus clementina; type=EST; length=413bpback to top |