CX290881
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290881 vs. ExPASy Swiss-Prot
Match: UBP12_ARATH (Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana GN=UBP12 PE=2 SV=2) HSP 1 Score: 296.975 bits (759), Expect = 3.982e-80 Identity = 147/183 (80.33%), Postives = 151/183 (82.51%), Query Frame = 1 Query: 1 QWYKFDDERVTKEDLKRALEEQYGGEEELPQTNPGFNNTP-FKFTKYSNAYMLVYIRESDKDKIICNVDEQDIAXXXXXXXXXXXXXXXXXXXXXXXXHLYTVIKVARDDDLLEQIGKDIYFDLVDHDKVRSFRIQKQIPFNLFKEEVAKEFGVPVQLQRFWLWAKRQNHTYRPNRPLTHLEE 546 QWYKFDDERVTKEDLKRALEEQYGGEEELPQTNPGFNN P FKFTKYSNAYMLVYIRESDKDKIICNVDE+DIA HLYT+IKVARD+DL EQIGKDIYFDLVDHDKVRSFRIQKQ PF FKEEVAKEFGVPVQLQRFW+WAKRQNHTYRPNRPLT EE Sbjct: 467 QWYKFDDERVTKEDLKRALEEQYGGEEELPQTNPGFNNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHLRVRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLKEQIGKDIYFDLVDHDKVRSFRIQKQTPFQQFKEEVAKEFGVPVQLQRFWIWAKRQNHTYRPNRPLTPQEE 649
BLAST of CX290881 vs. ExPASy Swiss-Prot
Match: UBP13_ARATH (Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana GN=UBP13 PE=1 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 2.185e-78 Identity = 141/182 (77.47%), Postives = 149/182 (81.87%), Query Frame = 1 Query: 1 QWYKFDDERVTKEDLKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEQDIAXXXXXXXXXXXXXXXXXXXXXXXXHLYTVIKVARDDDLLEQIGKDIYFDLVDHDKVRSFRIQKQIPFNLFKEEVAKEFGVPVQLQRFWLWAKRQNHTYRPNRPLTHLEE 546 QWYKFDDERVTKED+KRALEEQYGGEEELPQ NPGFNN PFKFTKYSNAYMLVYIRESDKDKIICNVDE+DIA HL+T IKVARDDD+ EQIGK+IYFDLVDH+KVRSFRIQKQ PF FKEEVAKEFGVPVQLQRFW+WAKRQNHTYRPNRPL+ EE Sbjct: 466 QWYKFDDERVTKEDVKRALEEQYGGEEELPQNNPGFNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHLRVRLKKEQEEKEDKRKYKAQAHLFTTIKVARDDDITEQIGKNIYFDLVDHEKVRSFRIQKQTPFQQFKEEVAKEFGVPVQLQRFWIWAKRQNHTYRPNRPLSPNEE 647
BLAST of CX290881 vs. ExPASy Swiss-Prot
Match: UBP5_SCHPO (Probable ubiquitin carboxyl-terminal hydrolase 5 OS=Schizosaccharomyces pombe GN=ubp5 PE=2 SV=3) HSP 1 Score: 89.7373 bits (221), Expect = 9.655e-18 Identity = 55/181 (30.39%), Postives = 87/181 (48.07%), Query Frame = 1 Query: 4 WYKFDDERVTKEDLKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEQDIAXXXXXXXXXXXXXXXXXXXXXXXXHLYTVIKVARDDDLLEQIGKDI--YFDLVDHDKVRSFRIQKQIPFNLFKEEVAKEFGVPVQLQRFWLWAKRQNHTYRPNRPLTHL 540 WYK+DD RVT+ L+ LEE YGG+ + +P F + P K ++ +AYML+Y+R+ D+++ V +I HLYT +++ + E DI + + + + FRI+K+ F+ F VA++ G P + RFW KR N T R P+ L Sbjct: 477 WYKYDDTRVTRATLREVLEENYGGDYIM---HPPFRS-PVKLKRFMSAYMLLYLRKDKLDELMNPVSADEIPEHLKEALNPSIQLAELRRKERLESHLYTKVQLITPEFYSEHHEFDIADFGNAYKEETIPQFRIKKEAKFSEFIPIVAEKLGYPQECMRFWYVVKRHNCTVRVESPVNEL 653
BLAST of CX290881 vs. ExPASy Swiss-Prot
Match: UBP21_SCHPO (Ubiquitin carboxyl-terminal hydrolase 21 OS=Schizosaccharomyces pombe GN=ubp21 PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 8.458e-14 Identity = 54/178 (30.34%), Postives = 79/178 (44.38%), Query Frame = 1 Query: 4 WYKFDDERVTKEDLKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEQDIAXXXXXXXXXXXXXXXXXXXXXXXXHLYTVIKVARDDDLLEQIGKDIY-FDLVDHDKVR-SFRIQKQIPFNLFKEEVAKEFGVPVQLQRFWLWAKRQNHTYRPNRPL 531 W+KFDD+RVT+ +K LE+ YGGE G+N PFK ++ NAYMLVY R+S D I+ V +D+ +Y ++V D + G D+ F D D V + +I++ ++ +A R WL RQN T R + PL Sbjct: 494 WFKFDDDRVTRATIKEVLEDNYGGEP--AGRAKGYNGNPFK--RFMNAYMLVYFRKSRLDHILSPVTAEDVPFHVRNTLDEEHRVVERKLLEREEQQIYRRVRVLTTDGFKKYHGFDMTDFSASDDDPVLITTKIKRNANIWDLQKHLAGLLNRDTSGIRIWLMTNRQNRTVRVDLPL 667
BLAST of CX290881 vs. ExPASy Swiss-Prot
Match: UBP7_RAT (Ubiquitin carboxyl-terminal hydrolase 7 OS=Rattus norvegicus GN=Usp7 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.641e-12 Identity = 48/175 (27.43%), Postives = 73/175 (41.71%), Query Frame = 1 Query: 1 QWYKFDDERVTKEDLKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEQDIAXXXXXXXXXXXXXXXXXXXXXXXXHLYTVIKVARDDDLLEQIGKDIYFDLVDHDKVR--SFRIQKQIPFNLFKEEVAKEFGVPVQLQRFWLWAKRQNHTYRP 519 +W KFDD+ V++ + A+E YGG ++ +NAYMLVYIRES +++ V + DI HLY +++ +D G D+Y D +KVR F++ K F + +++ G P R W R N T RP Sbjct: 477 KWCKFDDDVVSRCTKEEAIEHNYGGHDD-----------DLSVRHCTNAYMLVYIRESKLSEVLQAVTDHDIPQQLVERLQEEKRIEAQKRKERQEAHLYMQVQIVAEDQFCGHQGNDMY----DEEKVRYTVFKVLKNSSLAEFVQSLSQTMGFPQDQIRLWPMQARSNGTKRP 636
BLAST of CX290881 vs. ExPASy Swiss-Prot
Match: UBP7_MOUSE (Ubiquitin carboxyl-terminal hydrolase 7 OS=Mus musculus GN=Usp7 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.641e-12 Identity = 48/175 (27.43%), Postives = 73/175 (41.71%), Query Frame = 1 Query: 1 QWYKFDDERVTKEDLKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEQDIAXXXXXXXXXXXXXXXXXXXXXXXXHLYTVIKVARDDDLLEQIGKDIYFDLVDHDKVR--SFRIQKQIPFNLFKEEVAKEFGVPVQLQRFWLWAKRQNHTYRP 519 +W KFDD+ V++ + A+E YGG ++ +NAYMLVYIRES +++ V + DI HLY +++ +D G D+Y D +KVR F++ K F + +++ G P R W R N T RP Sbjct: 477 KWCKFDDDVVSRCTKEEAIEHNYGGHDD-----------DLSVRHCTNAYMLVYIRESKLSEVLQAVTDHDIPQQLVERLQEEKRIEAQKRKERQEAHLYMQVQIVAEDQFCGHQGNDMY----DEEKVRYTVFKVLKNSSLAEFVQSLSQTMGFPQDQIRLWPMQARSNGTKRP 636
BLAST of CX290881 vs. ExPASy Swiss-Prot
Match: UBP7_CHICK (Ubiquitin carboxyl-terminal hydrolase 7 OS=Gallus gallus GN=USP7 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.062e-12 Identity = 47/175 (26.86%), Postives = 73/175 (41.71%), Query Frame = 1 Query: 1 QWYKFDDERVTKEDLKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEQDIAXXXXXXXXXXXXXXXXXXXXXXXXHLYTVIKVARDDDLLEQIGKDIYFDLVDHDKVR--SFRIQKQIPFNLFKEEVAKEFGVPVQLQRFWLWAKRQNHTYRP 519 +W KFDD+ V++ + A+E YGG ++ +NAYMLVYIRES +++ V + DI HLY +++ +D G D+Y D +KV+ F++ K F + +++ G P R W R N T RP Sbjct: 476 KWCKFDDDVVSRCTKEEAIEHNYGGHDD-----------DLSVRHCTNAYMLVYIRESKLSEVLQPVTDHDIPQQLVERLQEEKRIEAQKRKERQEAHLYMQVQIVAEDQFCGHQGNDMY----DEEKVKYTVFKVLKNSTLTEFVQNLSQTMGFPQDQIRLWPMQARSNGTKRP 635
BLAST of CX290881 vs. ExPASy Swiss-Prot
Match: UBP7_HUMAN (Ubiquitin carboxyl-terminal hydrolase 7 OS=Homo sapiens GN=USP7 PE=1 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.034e-11 Identity = 47/175 (26.86%), Postives = 73/175 (41.71%), Query Frame = 1 Query: 1 QWYKFDDERVTKEDLKRALEEQYGGEEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEQDIAXXXXXXXXXXXXXXXXXXXXXXXXHLYTVIKVARDDDLLEQIGKDIYFDLVDHDKVR--SFRIQKQIPFNLFKEEVAKEFGVPVQLQRFWLWAKRQNHTYRP 519 +W KFDD+ V++ + A+E YGG ++ +NAYMLVYIRES +++ V + DI HLY +++ +D G D+Y D +KV+ F++ K F + +++ G P R W R N T RP Sbjct: 476 KWCKFDDDVVSRCTKEEAIEHNYGGHDD-----------DLSVRHCTNAYMLVYIRESKLSEVLQAVTDHDIPQQLVERLQEEKRIEAQKRKERQEAHLYMQVQIVAEDQFCGHQGNDMY----DEEKVKYTVFKVLKNSSLAEFVQSLSQTMGFPQDQIRLWPMQARSNGTKRP 635 The following BLAST results are available for this feature:
BLAST of CX290881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290881 ID=CX290881; Name=CX290881; organism=Citrus clementina; type=EST; length=548bpback to top |