CX290929

Overview
NameCX290929
Unique NameCX290929
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length587
Libraries
Library NameType
OF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig4988 contig Ccv1_Contig4988:64..650. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX290929 vs. ExPASy Swiss-Prot
Match: PNAE_RAUSE (Polyneuridine-aldehyde esterase OS=Rauvolfia serpentina GN=PNAE PE=1 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 9.387e-57
Identity = 107/195 (54.87%), Postives = 142/195 (72.82%), Query Frame = 2
Query:    2 HFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYG 586
            HFVLVHG   GAW WYKLK  L + GH+VTAVDL+A+GIN +R++++HTF  YSEPLMEV+AS+P +EKV+L+GHS GG++L LA + +P KISVAVF++A MPD  H  ++  E+Y+EK     D  LD+QFS         +SM+ G +F+ +K++Q C  EDLELAKML RPGS+F  +L+K  KFS E YG
Sbjct:   12 HFVLVHGGCLGAWIWYKLKPLLESAGHKVTAVDLSAAGINPRRLDEIHTFRDYSEPLMEVMASIPPDEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKC--PADMMLDSQFSTYGNPENPGMSMILGPQFMALKMFQNCSVEDLELAKMLTRPGSLFFQDLAKAKKFSTERYG 204          
BLAST of CX290929 vs. ExPASy Swiss-Prot
Match: HNL_HEVBR (Hydroxynitrilase OS=Hevea brasiliensis GN=HNL PE=1 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 8.242e-45
Identity = 92/195 (47.18%), Postives = 125/195 (64.10%), Query Frame = 2
Query:    2 HFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYG 586
            HFVL+H + HGAW W+KLK  L A GH+VTA+DLAASG++ ++IE++ +F  YSEPL+  L +LP  EKVILVG S GG+ +A+AADK+  KI+ AVF  + +PDT H PS+V+++  E        W DT +            +  G   L   +Y LC PE+ ELAKML R GS+F + L+K   F+ EGYG
Sbjct:    5 HFVLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVF----PDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLFQNILAKRPFFTKEGYG 195          
BLAST of CX290929 vs. ExPASy Swiss-Prot
Match: PIR7A_ORYSJ (Probable esterase PIR7A OS=Oryza sativa subsp. japonica GN=PIR7A PE=2 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 4.233e-41
Identity = 81/197 (41.12%), Postives = 127/197 (64.47%), Query Frame = 2
Query:    2 HFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDN--LSKESKFSDEGYG 586
            HFV VHG+ HGAWCWY++ A L A GHR TA+D+AA+G +  R ++V +   YS PL++ +A+    E+++LVGHSLGG++LALA ++FP K++ AVF+ A MP         LE++  ++  + D ++D++    + +     ++L G + L  K+Y   PPEDL LA MLVRPG+ +ID+  +  E+  ++  YG
Sbjct:    7 HFVFVHGLGHGAWCWYRVVAALRAAGHRATALDMAAAGAHPARADEVGSLEEYSRPLLDAVAAAAPGERLVLVGHSLGGLSLALAMERFPDKVAAAVFLAACMPAAGKHMGITLEEFMRRI--KPDFFMDSKTIVLNTNQEPRTAVLLGPKLLAEKLYNRSPPEDLTLATMLVRPGTNYIDDPIMKDETLLTEGNYG 201          
BLAST of CX290929 vs. ExPASy Swiss-Prot
Match: PIR7A_ORYSI (Probable esterase PIR7A OS=Oryza sativa subsp. indica GN=PIR7A PE=3 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 4.233e-41
Identity = 81/197 (41.12%), Postives = 127/197 (64.47%), Query Frame = 2
Query:    2 HFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDN--LSKESKFSDEGYG 586
            HFV VHG+ HGAWCWY++ A L A GHR TA+D+AA+G +  R ++V +   YS PL++ +A+    E+++LVGHSLGG++LALA ++FP K++ AVF+ A MP         LE++  ++  + D ++D++    + +     ++L G + L  K+Y   PPEDL LA MLVRPG+ +ID+  +  E+  ++  YG
Sbjct:    7 HFVFVHGLGHGAWCWYRVVAALRAAGHRATALDMAAAGAHPARADEVGSLEEYSRPLLDAVAAAAPGERLVLVGHSLGGLSLALAMERFPDKVAAAVFLAACMPAAGKHMGITLEEFMRRI--KPDFFMDSKTIVLNTNQEPRTAVLLGPKLLAEKLYNRSPPEDLTLATMLVRPGTNYIDDPIMKDETLLTEGNYG 201          
BLAST of CX290929 vs. ExPASy Swiss-Prot
Match: HNL_MANES (Hydroxynitrilase OS=Manihot esculenta GN=HNL PE=1 SV=3)

HSP 1 Score: 167.548 bits (423), Expect = 4.233e-41
Identity = 83/196 (42.35%), Postives = 126/196 (64.29%), Query Frame = 2
Query:    2 HFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQ-FSQCDASNPSHISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDNLSKESKFSDEGYG 586
            HFVL+H + HGAW W+KLK  L   GH+VTA+D+AASGI+ ++IE +++F  YSEPL+  L  LP  EKVI+VG S  G+ +A+AAD++  KI+  VF  + +PDT H PS+ +E+  E        W DT+ F+  + +  +  +M  G   L   ++  C   + ELAKM++R GS+F + L++  KF+++GYG
Sbjct:    5 HFVLIHTICHGAWIWHKLKPALERAGHKVTALDMAASGIDPRQIEQINSFDEYSEPLLTFLEKLPQGEKVIIVGESCAGLNIAIAADRYVDKIAAGVFHNSLLPDTVHSPSYTVEKLLESF----PDWRDTEYFTFTNITGETITTMKLGFVLLRENLFTKCTDGEYELAKMVMRKGSLFQNVLAQRPKFTEKGYG 196          
BLAST of CX290929 vs. ExPASy Swiss-Prot
Match: PIR7B_ORYSJ (Esterase PIR7B OS=Oryza sativa subsp. japonica GN=PIR7B PE=2 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 7.221e-41
Identity = 87/198 (43.94%), Postives = 126/198 (63.64%), Query Frame = 2
Query:    2 HFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAE-EKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDN--LSKESKFSDEGYG 586
            HF+LVHG+ HGAWCWY++ A L A GHR TA+D+AASG +  R+++V TF  YS PL++ +A+  A  E+++LVGHS GG+++ALA ++FP K++ AVFV A MP          E++  +   E    +D +    + S  S +++  G  FL  K YQ  P EDL LAKMLVRPG+ F+D+  +  ES  ++  YG
Sbjct:   10 HFILVHGLCHGAWCWYRVVAALRAAGHRATALDMAASGAHPARVDEVGTFEEYSRPLLDAVAAAAAPGERLVLVGHSHGGLSVALAMERFPDKVAAAVFVAAAMPCVGKHMGVPTEEFMRRTAPE-GLLMDCEMVAINNSQGSGVAINLGPTFLAQKYYQQSPAEDLALAKMLVRPGNQFMDDPVMKDESLLTNGNYG 206          
BLAST of CX290929 vs. ExPASy Swiss-Prot
Match: PIR7B_ORYSI (Esterase PIR7B OS=Oryza sativa subsp. indica GN=PIR7B PE=3 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 7.221e-41
Identity = 87/198 (43.94%), Postives = 126/198 (63.64%), Query Frame = 2
Query:    2 HFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAE-EKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSMFIDN--LSKESKFSDEGYG 586
            HF+LVHG+ HGAWCWY++ A L A GHR TA+D+AASG +  R+++V TF  YS PL++ +A+  A  E+++LVGHS GG+++ALA ++FP K++ AVFV A MP          E++  +   E    +D +    + S  S +++  G  FL  K YQ  P EDL LAKMLVRPG+ F+D+  +  ES  ++  YG
Sbjct:   10 HFILVHGLCHGAWCWYRVVAALRAAGHRATALDMAASGAHPARVDEVGTFEEYSRPLLDAVAAAAAPGERLVLVGHSHGGLSVALAMERFPDKVAAAVFVAAAMPCVGKHMGVPTEEFMRRTAPE-GLLMDCEMVAINNSQGSGVAINLGPTFLAQKYYQQSPAEDLALAKMLVRPGNQFMDDPVMKDESLLTNGNYG 206          
BLAST of CX290929 vs. ExPASy Swiss-Prot
Match: Y1399_ARATH (Probable esterase At1g33990 OS=Arabidopsis thaliana GN=At1g33990 PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 7.010e-28
Identity = 68/175 (38.86%), Postives = 97/175 (55.43%), Query Frame = 2
Query:    5 FVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQF-SQCDASNPSHISMLFGREFLTIKIYQLCPPEDLELAKMLVRP 526
            FVLVHG   GAWCWYK+ A L   G     VDL   G NM     V T   YS+PL+++L +LP EEKVILVGHS GG +++ A ++FP KIS A+FV A M     RP    + +SE++G  +    ++QF    +  +      +F +  +    +   P +D+ LA + +RP
Sbjct:   98 FVLVHGEGFGAWCWYKMVASLEESGLSPVTVDLTGCGFNMTDTNTVSTLEEYSKPLIDLLENLPEEEKVILVGHSTGGASISYALERFPEKISKAIFVCATMVSDGQRP---FDVFSEELGSAERFMKESQFLIYGNGKDKPPTGFMFEKPHMKGLYFNQSPNKDIALAMISMRP 269          
BLAST of CX290929 vs. ExPASy Swiss-Prot
Match: PPD_RAPSA (Pheophorbidase OS=Raphanus sativus GN=PPD PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.562e-27
Identity = 68/176 (38.64%), Postives = 96/176 (54.55%), Query Frame = 2
Query:    2 HFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMG-KEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQLCPPEDLELAKMLVRP 526
            HFV VHG +HGAWCWYKL   LVA G + T+VDL  +GIN+     V  F  Y+ PL  +L+ LP+  K++LVGHS+GG ++  A  KF  KIS+ V++ A M     +P      +   M   E+D W   ++   + ++     +L   EF     Y   P ED+ LA  L+RP
Sbjct:   13 HFVFVHGASHGAWCWYKLTTLLVAAGFKATSVDLTGAGINLTDSNTVFDFDHYNRPLFSLLSDLPSHHKIVLVGHSIGGGSVTEALCKFTDKISMVVYLAADMV----QPGSTSSTHDSIMTVGEEDIW---EYIYGEGADKPPTGVLMKEEFRRHYYYSQSPLEDVSLASKLLRP 181          
BLAST of CX290929 vs. ExPASy Swiss-Prot
Match: PPD_ARATH (Probable pheophorbidase OS=Arabidopsis thaliana GN=PPD PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.255e-26
Identity = 68/178 (38.20%), Postives = 96/178 (53.93%), Query Frame = 2
Query:    2 HFVLVHGVNHGAWCWYKLKARLVAGGHRVTAVDLAASGINMKRIEDVHTFHAYSEPLMEVLASLPAEEKVILVGHSLGGVTLALAADKFPHKISVAVFVTAFMPDTTHRPSFVLEQYSEKMGKEDDSWLDTQFSQCDASNPSHISMLFGREFLTIKIYQLCPPEDLELAKMLVRPGSM 535
            HFV VHG +HGAWCWYKL   L A G + T+VDL  +GI++     V     Y+ PL  +L+ LP   KVILVGHS+GG ++  A  KF  KIS+A+++ A M      PS      S     E+D W   +++  + ++     +L   EF+    Y   P ED+ L+  L+RP  M
Sbjct:   12 HFVFVHGASHGAWCWYKLTTLLDAAGFKSTSVDLTGAGISLIDSNIVFDSDQYNRPLFSLLSDLPPHHKVILVGHSIGGGSVTEALCKFTDKISMAIYLAASMVQPGSIPS---PHLSNIHVGEEDIW---EYTYGEGTDKPPTGVLMKPEFIRHYYYSQSPLEDVTLSSKLLRPAPM 183          
The following BLAST results are available for this feature:
BLAST of CX290929 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
PNAE_RAUSE9.387e-5754.87Polyneuridine-aldehyde esterase OS=Rauvolfia serpe... [more]
HNL_HEVBR8.242e-4547.18Hydroxynitrilase OS=Hevea brasiliensis GN=HNL PE=1... [more]
PIR7A_ORYSJ4.233e-4141.12Probable esterase PIR7A OS=Oryza sativa subsp. jap... [more]
PIR7A_ORYSI4.233e-4141.12Probable esterase PIR7A OS=Oryza sativa subsp. ind... [more]
HNL_MANES4.233e-4142.35Hydroxynitrilase OS=Manihot esculenta GN=HNL PE=1 ... [more]
PIR7B_ORYSJ7.221e-4143.94Esterase PIR7B OS=Oryza sativa subsp. japonica GN=... [more]
PIR7B_ORYSI7.221e-4143.94Esterase PIR7B OS=Oryza sativa subsp. indica GN=PI... [more]
Y1399_ARATH7.010e-2838.86Probable esterase At1g33990 OS=Arabidopsis thalian... [more]
PPD_RAPSA1.562e-2738.64Pheophorbidase OS=Raphanus sativus GN=PPD PE=1 SV=... [more]
PPD_ARATH2.255e-2638.20Probable pheophorbidase OS=Arabidopsis thaliana GN... [more]
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Properties
Property NameValue
Genbank descriptionC03001H05Rv OF1 Citrus clementina cDNA clone C03001H05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290929 ID=CX290929; Name=CX290929; organism=Citrus clementina; type=EST; length=587bp
GCATTTTGTTCTAGTTCATGGAGTAAACCATGGAGCATGGTGTTGGTACA
AACTGAAAGCAAGGCTGGTGGCGGGGGGTCACCGGGTGACGGCTGTGGAC
CTAGCCGCCTCGGGCATCAACATGAAGAGAATTGAGGATGTGCACACATT
CCATGCATACAGTGAGCCCTTGATGGAGGTTTTGGCATCACTTCCTGCCG
AAGAAAAGGTCATACTTGTCGGACACAGTCTTGGGGGCGTCACTTTGGCC
CTTGCCGCCGACAAATTCCCACACAAAATCTCCGTGGCTGTTTTCGTAAC
TGCATTCATGCCTGACACCACACACCGCCCATCTTTTGTTTTGGAGCAGT
ATTCTGAGAAGATGGGAAAAGAGGACGACAGCTGGTTGGACACTCAATTT
TCACAATGTGACGCGTCAAATCCATCTCACATTTCCATGCTTTTCGGCCG
CGAGTTCTTGACTATCAAGATCTATCAGCTTTGTCCTCCTGAGGATCTGG
AGCTGGCCAAGATGTTGGTGAGGCCAGGATCAATGTTTATAGACAACTTA
TCGAAGGAAAGTAAGTTCAGCGATGAAGGATACGGAT
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