CX290936
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX290936 vs. ExPASy Swiss-Prot
Match: WDR70_XENTR (WD repeat-containing protein 70 OS=Xenopus tropicalis GN=wdr70 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 3.674e-38 Identity = 83/189 (43.92%), Postives = 109/189 (57.67%), Query Frame = 3 Query: 3 DMYIRDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHS--DDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGLLCF 563 D YI D+ NTKGH L G WHPK KE +T S DG++R WDV+ K K V KP+ + RV T C + DGK IA G DGSIQ+W+ ++ H + H+ D + + FS G IL +R D +LK WD+RK K PL V L N + T+ FSPD++L +TGTSV+R G L+ F Sbjct: 238 DQYIVDMANTKGHTAMLNGGCWHPKIKEEFMTCSNDGTVRTWDVSNEKKHKGVFKPRSMQGKRVIPTCCTYSRDGKFIAAGCQDGSIQIWDRNMSVHTK--FHCRQAHTPGTDTSCVTFSYAGNILATRGGDDTLKTWDIRKFKNPLNVASGLANYFPMTDCCFSPDDKLLITGTSVKRGGGDGKLMFF 424
BLAST of CX290936 vs. ExPASy Swiss-Prot
Match: WDR70_XENLA (WD repeat-containing protein 70 OS=Xenopus laevis GN=wdr70 PE=2 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 3.110e-37 Identity = 81/189 (42.86%), Postives = 108/189 (57.14%), Query Frame = 3 Query: 3 DMYIRDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHS--DDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGLLCF 563 D YI D+ NTKGH L G WHPK KE +T S DG++R WDV+ K K + KP+ + V T C + DGK IA G DGSIQ+W+ ++ H + H+ D + + FS G +L +R D +LK WD+RK K PL V L N + T+ FSPD++L +TGTSV+R G LL F Sbjct: 238 DQYIVDMANTKGHTAMLNGGCWHPKIKEEFMTCSNDGTVRTWDVSNEKKHKGIFKPRSVQGKPVIPTCCTYSRDGKFIAAGCQDGSIQIWDRNMSVHTK--FHCRQAHTPGTDTSCVTFSYGGNVLATRGGDDTLKTWDIRKFKNPLNVASGLENFFPMTDCCFSPDDKLLITGTSVKRGIGDGKLLFF 424
BLAST of CX290936 vs. ExPASy Swiss-Prot
Match: WDR70_RAT (WD repeat-containing protein 70 OS=Rattus norvegicus GN=Wdr70 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 5.305e-37 Identity = 78/192 (40.62%), Postives = 111/192 (57.81%), Query Frame = 3 Query: 3 DMYIRDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHS--DDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGLLCFYDR 572 D YI D+ NTKGH L G WHPK K +T S D ++R+W+V K QK V KP+ + +V TTC + DG +A +GSIQ+W+ P H ++ H+ D + + FS DG +L SR D +LK+WD+R+ +PL DLP + T+ FSPD++L +TGTSV+R +G L+ F R Sbjct: 271 DQYIVDMANTKGHTAMLHTGSWHPKIKGEFMTCSNDATVRLWEVENPKKQKSVFKPRTMQGKKVIPTTCTYSRDGNLVAAACQNGSIQIWD--RNLTVHPKFHYKQAHAPGTDTSCVAFSYDGNVLASRGGDDTLKLWDVRQFNKPLFSASDLPTLFPMTDCCFSPDDKLIVTGTSVQRGCGSGKLVFFERR 460
BLAST of CX290936 vs. ExPASy Swiss-Prot
Match: WDR70_HUMAN (WD repeat-containing protein 70 OS=Homo sapiens GN=WDR70 PE=1 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.016e-36 Identity = 78/192 (40.62%), Postives = 108/192 (56.25%), Query Frame = 3 Query: 3 DMYIRDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGHSD--DITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGLLCFYDR 572 D YI D+ NTKGH L G WHPK K +T S D ++R W+V K QK V KP+ + +V TTC + DG IA +GSIQ+W+ P H ++ H D + + FS DG +L SR D SLK+WD+R+ +PL LP + T+ FSPD++L +TGTS++R +G L+ F R Sbjct: 270 DQYIVDMANTKGHTAMLHTGSWHPKIKGEFMTCSNDATVRTWEVENPKKQKSVFKPRTMQGKKVIPTTCTYSRDGNLIAAACQNGSIQIWD--RNLTVHPKFHYKQAHDSGTDTSCVTFSYDGNVLASRGGDDSLKLWDIRQFNKPLFSASGLPTMFPMTDCCFSPDDKLIVTGTSIQRGCGSGKLVFFERR 459
BLAST of CX290936 vs. ExPASy Swiss-Prot
Match: WDR70_BOVIN (WD repeat-containing protein 70 OS=Bos taurus GN=WDR70 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 5.865e-36 Identity = 78/192 (40.62%), Postives = 108/192 (56.25%), Query Frame = 3 Query: 3 DMYIRDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGH--SDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGLLCFYDR 572 D YI D+ NTKGH L G WHPK K +T S D ++R W+V K QK V KP+ + +V TTC + DG IA +GSIQ+W+ P H ++ H D + + FS DG +L SR D +LK+WD+R+ +PL LP + T+ FSPD++L +TGTSV+R +G L+ F R Sbjct: 268 DQYIVDMANTKGHTAMLHTGSWHPKIKGEFMTCSNDATVRTWEVENPKKQKSVFKPRTMQGKKVIPTTCTYSRDGSLIAAACQNGSIQIWD--RNLTVHPKFHYKQAHDPGTDTSCVTFSYDGTVLASRGGDDTLKLWDIRQFNKPLFSASGLPTMFPMTDCCFSPDDKLIVTGTSVQRGCGSGKLVFFERR 457
BLAST of CX290936 vs. ExPASy Swiss-Prot
Match: WDR70_MOUSE (WD repeat-containing protein 70 OS=Mus musculus GN=Wdr70 PE=1 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.706e-35 Identity = 75/187 (40.11%), Postives = 107/187 (57.22%), Query Frame = 3 Query: 3 DMYIRDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGH--SDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGLL 557 D YI D+ NTKGH L WHPK K +T S D ++R+W+V K QK V KP+ + +V TTC + DG +A +GSIQ+W+ P H ++ H D + + FS DG +L SR D +LK+WD+R+ +PL DLP + T+ FSPD++L +TGTSV+R +G L+ Sbjct: 273 DQYIVDMANTKGHTAMLHTDSWHPKIKGEFMTCSNDATVRLWEVENPKKQKSVFKPRTMQGKKVIPTTCTYSRDGNLVAAACQNGSIQIWD--RNLTVHPKFHYKQAHDPGTDTSCVAFSYDGNVLASRGGDDTLKLWDVRQFNKPLFSASDLPTLFPMTDCCFSPDDKLIVTGTSVQRGCGSGKLV 457
BLAST of CX290936 vs. ExPASy Swiss-Prot
Match: GAD1_CAEEL (Gastrulation defective protein 1 OS=Caenorhabditis elegans GN=gad-1 PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 5.138e-32 Identity = 79/197 (40.10%), Postives = 109/197 (55.33%), Query Frame = 3 Query: 3 DMYIRDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFK-------SQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSR---PDIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGLLCF 563 D YI DL TKGH + C E++P K ++ S+DGSLR+W++++ K ++VIK K A RV+ C + DGK IA G DGS+Q W +GS+ + V K H+ IT++ FS D + LLSR FD +LK+W L KEPL V L N + T+ FSP ++ TGTS + T G L F Sbjct: 211 DQYIIDLNITKGHTATVNCVEFNPLNKNEFISCSDDGSLRLWNLDDHKVITKCINKHRKVIKTKGANGKRVSPQVCTFSPDGKWIAAGCDDGSVQAWK----YGSQYVNVNYLVRKAHNGSITSIAFSPDSKRLLSRGFDDTLKMWSLDNPKEPLLVKTGLENAFKSTDCGFSPRAEVVFTGTSSPNKDTPGTLQFF 403
BLAST of CX290936 vs. ExPASy Swiss-Prot
Match: GAD1_DROME (Gastrulation defective protein 1 homolog OS=Drosophila melanogaster GN=CG5543 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.159e-30 Identity = 74/188 (39.36%), Postives = 109/188 (57.98%), Query Frame = 3 Query: 3 DMYIRDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVAVTTCAWDCDGKCIAGGIGDGSIQVWNLKPGWGSRP----DIHVEKGHSDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVERESTTGGL 554 D YI D+ TKGH+ LT G WHP +E LT++ DG+LRIW + K Q QVIK + R +C ++ D IA G DGSIQ W+ + + + D H +KG +IT++ FS G+ L +RS D ++K+WDLR+ K+PL + +L + Y T+ FSPD++L +TG S+ + L Sbjct: 270 DQYISDMSRTKGHVAQLTSGCWHPFNREQFLTAALDGTLRIWQGLKSKEQLQVIKTRAQGGLRTNAASCNFNRDATLIAAGCVDGSIQTWDTRKMFVNTTHCVRDAH-QKG--SEITSIVFSYMGQQLATRSNDETMKLWDLRQFKQPLHTWTNLFSRYDTTDCCFSPDDRLLVTGESLPKGQAEANL 454
BLAST of CX290936 vs. ExPASy Swiss-Prot
Match: YIPH_SCHPO (Uncharacterized WD repeat-containing protein C343.17c OS=Schizosaccharomyces pombe GN=SPAC343.17c PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.891e-26 Identity = 72/181 (39.78%), Postives = 99/181 (54.70%), Query Frame = 3 Query: 3 DMYIRDLKNTKGHICGLTCGEWHPKTKETILTSSEDGSLRIWDVNEFKSQKQVI--KPKLARPG--RVAVTTCAWD-CDGKCIAGGIGDGSIQVWNLKPGWGSRPDIHVEKGH--SDDITALKFSSDGRILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTS 524 D YIR++ NTKGHI +T G W P + + LT+ D + RIWDVN KSQ +V P+ + G R+ VT+CAW+ A + DGSIQ W K RP + ++ H I+ L FS DG LLSR D +L+VWDLR + + D+ A N FSP ++L L G++ Sbjct: 184 DQYIRNMYNTKGHIAEITDGCWQPDSSQIFLTTGYDSTARIWDVNRTKSQLEVFVHVPEGSHTGLSRIPVTSCAWNPAKPDNFATAVLDGSIQFWQ-KGSRTKRPVMKIKDAHLPQQGISCLSFSQDGNYLLSRGEDNALRVWDLRNSNKCVNERIDILTPKAGGNAIFSPTQKLILAGST 363
BLAST of CX290936 vs. ExPASy Swiss-Prot
Match: HAT2_USTMA (Histone acetyltransferase type B subunit 2 OS=Ustilago maydis GN=HAT2 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.906e-12 Identity = 48/159 (30.19%), Postives = 76/159 (47.80%), Query Frame = 3 Query: 66 WHPKTKETILTSSEDGSLRIWDVNEFKSQKQVIKPKLARPGRVA-VTTCAWDCDGKCIAGGIGDG-SIQVWNLKPGWGSRPDIHVEKGHSDDITALKFSSDG-RILLSRSFDGSLKVWDLRKMKEPLKVFEDLPNNYAQTNVAFSPDEQLFLTGTSVER 533 W P + IL +SED ++ WD+N + ++P G A V AW + + G +GD + +W+++ S P VE H+ ++ AL FS + IL++ S D S+ VWDLR +K L E + +V +SP L S +R Sbjct: 249 WSPLKQGHILAASEDTTVCHWDINNYTKPNNTLQPSATYTGHTAIVEDVAWHNHHESLFGSVGDDRQLLIWDIREP-ASAPKYRVE-AHTGEVNALAFSPENENILVTGSSDKSVGVWDLRNLKVKLHSLESHTDEI--LSVCWSPHHATVLASASADR 403 The following BLAST results are available for this feature:
BLAST of CX290936 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290936 ID=CX290936; Name=CX290936; organism=Citrus clementina; type=EST; length=613bpback to top |