CX290945

Overview
NameCX290945
Unique NameCX290945
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length487
Libraries
Library NameType
OF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290945 vs. ExPASy Swiss-Prot
Match: Y5005_ARATH (Probable receptor-like protein kinase At5g20050 OS=Arabidopsis thaliana GN=At5g20050 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 7.267e-34
Identity = 78/163 (47.85%), Postives = 105/163 (64.42%), Query Frame = 1
Query:    7 GKLLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVXDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANXPITXKSDVYSYGMVLLEIVSGRRNFE--VXQETNXKK---FFLWAYEXXEKGNVKGIVDKSLAG-EDVDIEQVMR 477
            G  L+W+ R+ +A+  A+ + YLH +CR  I+H D+KPENILLDEN+ A V DFGL+KLI   +   R LT +RGTRGYLAPEWL    I+ KSDVYSYG+VLLE++ GRR+      +ET  KK   F     +   +  +  IVD+ L    +VD E+VM+
Sbjct:  202 GGCLSWEQRYQVAIDVAKALAYLHHDCRSKILHLDVKPENILLDENFRAVVTDFGLSKLIARDE--SRVLTDIRGTRGYLAPEWLLEHGISEKSDVYSYGIVLLEMIGGRRSISRVEVKETKKKKLEYFPRIVNQKMRERKIMEIVDQRLIEVNEVDEEEVMK 362          
BLAST of CX290945 vs. ExPASy Swiss-Prot
Match: KPRO_MAIZE (Putative receptor protein kinase ZmPK1 OS=Zea mays GN=PK1 PE=2 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 1.240e-33
Identity = 64/118 (54.24%), Postives = 90/118 (76.27%), Query Frame = 1
Query:   13 LLNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVXDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANXPITXKSDVYSYGMVLLEIVSGRRNFEVXQETN 366
            LL+W+ RFNIALG A+G+ YLH EC + ++HCD+KPENILLD+ +  K+ DFGL KL+N +    + ++ VRGT GY+APEW+++ PIT K DVYSYG+VLLE+++G R  E+   T+
Sbjct:  626 LLDWEGRFNIALGVAKGLAYLHHECLEWVIHCDVKPENILLDQAFEPKITDFGLVKLLN-RGGSTQNVSHVRGTLGYIAPEWVSSLPITAKVDVYSYGVVLLELLTGTRVSELVGGTD 742          
BLAST of CX290945 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 4.875e-30
Identity = 65/152 (42.76%), Postives = 99/152 (65.13%), Query Frame = 1
Query:   16 LNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVXDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANXPITXKSDVYSYGMVLLEIVSGRRNFEVXQETNXKKFFL--WAYEXXEKGNVKGIVDKSLAGEDVDIE 465
            L+W  R +IALG+ARG+ YLH+ C   I+H D+K  NILLDE + A V DFGLAKL+N  D      T+VRGT G++APE+L+    + K+DV+ YG++LLE+++G++ F++ +  N     L  W  E  ++  ++ +VD  L G+ V+ E
Sbjct:  371 LDWPKRKHIALGSARGLAYLHDHCDQKIIHLDVKAANILLDEEFEAVVGDFGLAKLMNYND--SHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLLDWVKEVLKEKKLESLVDAELEGKYVETE 520          
BLAST of CX290945 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 8.315e-30
Identity = 65/152 (42.76%), Postives = 99/152 (65.13%), Query Frame = 1
Query:   16 LNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVXDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANXPITXKSDVYSYGMVLLEIVSGRRNFEVXQETNXKKFFL--WAYEXXEKGNVKGIVDKSLAGEDVDIE 465
            L+W  R +IALG+ARG+ YLH+ C   I+H D+K  NILLDE + A V DFGLAKL+N  D      T+VRGT G++APE+L+    + K+DV+ YG++LLE+++G++ F++ +  N     L  W  E  ++  ++ +VD  L G+ V+ E
Sbjct:  390 LDWPKRKHIALGSARGLAYLHDHCDQKIIHRDVKAANILLDEEFEAVVGDFGLAKLMNYND--SHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLLDWVKEVLKEKKLESLVDAELEGKYVETE 539          
BLAST of CX290945 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 4.127e-29
Identity = 69/153 (45.10%), Postives = 98/153 (64.05%), Query Frame = 1
Query:   16 LNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVXDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANXPITXKSDVYSYGMVLLEIVSGRRNFEVXQETNXKKFFLWAYEXXEKGNVKGIVDKSLAGEDVDIEQVM 474
            L+W +R  I LG A+G+T+LHEE R  IVH DIK  N+LLD++ NAK+ DFGLAKL N   + H + T + GT GY+APE+     +T K+DVYS+G+V LEIVSG+ N       +      WAY   E+G++  +VD +LA +  + E ++
Sbjct:  774 LDWSTRKKIFLGIAKGLTFLHEESRIKIVHRDIKASNVLLDKDLNAKISDFGLAKL-NDDGNTHIS-TRIAGTIGYMAPEYAMRGYLTEKADVYSFGVVALEIVSGKSNTNFRPTEDFVYLLDWAYVLQERGSLLELVDPTLASDYSEEEAML 924          
BLAST of CX290945 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 4.127e-29
Identity = 68/158 (43.04%), Postives = 105/158 (66.46%), Query Frame = 1
Query:   16 LNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVXDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANXPITXKSDVYSYGMVLLEIVSGRRNFEVXQETNXKKFFL--WAYEXXEKGNVKGIVDKSLAG--EDVDIEQVMR 477
            L+W  R  IALG+ARG+ YLH+ C   I+H D+K  NILLDE + A V DFGLAKL++ KD  H T T+VRGT G++APE+L+    + K+DV+ YG++LLE+++G+R F++ +  N     L  W     ++  ++ +VD  L G  +D ++EQ+++
Sbjct:  385 LDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVT-TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQ 540          
BLAST of CX290945 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 7.039e-29
Identity = 67/142 (47.18%), Postives = 86/142 (60.56%), Query Frame = 1
Query:   16 LNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVXDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANXPITXKSDVYSYGMVLLEIVSGRRNFEVXQETNXKKFFLWAYEXXEKGNVKGIVDKSL 441
            L+W +R+ I LG ARG+ YLHEE R  IVH D+K  NILLD     KV DFGLAKL +  D +    T V GT GYLAPE+     +T K+DVY++G+V LE+VSGR N +   E   +    WA+   EKG    ++D  L
Sbjct:  786 LDWSTRYEICLGVARGLVYLHEEARLRIVHRDVKASNILLDSKLVPKVSDFGLAKLYD--DKKTHISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVSGRPNSDENLEDEKRYLLEWAWNLHEKGREVELIDHQL 925          
BLAST of CX290945 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 2.675e-28
Identity = 68/158 (43.04%), Postives = 106/158 (67.09%), Query Frame = 1
Query:   16 LNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVXDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANXPITXKSDVYSYGMVLLEIVSGRRNFEVXQETNXKKFFL--WAYEXXEKGNVKGIVDKSLAG--EDVDIEQVMR 477
            L+W +R  IALG+ARG++YLH+ C   I+H D+K  NILLDE + A V DFGLAKL++ KD  H T T+VRGT G++APE+L+    + K+DV+ YG++LLE+++G+R F++ +  N     L  W     ++  ++ +VD  L    E+ ++EQV++
Sbjct:  398 LDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-THVT-TAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQTNYEERELEQVIQ 553          
BLAST of CX290945 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 4.563e-28
Identity = 69/156 (44.23%), Postives = 96/156 (61.54%), Query Frame = 1
Query:   16 LNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVXDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANXPITXKSDVYSYGMVLLEIVSGRRNFEVXQETNXKKFFLWAYEXXEKGNVKGIVDKSLAGEDVDIEQVMRAM 483
            L+W +R  I +G A+G+ YLHEE R  IVH DIK  N+LLD + NAK+ DFGLAKL N  ++ H + T + GT GY+APE+     +T K+DVYS+G+V LEIVSG+ N     +        WAY   E+G++  +VD  L G     ++ MR +
Sbjct:  764 LDWSTRNKICIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKL-NDDENTHIS-TRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGSLLELVDPDL-GTSFSKKEAMRML 916          
BLAST of CX290945 vs. ExPASy Swiss-Prot
Match: Y2393_ARATH (Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 7.783e-28
Identity = 65/154 (42.21%), Postives = 93/154 (60.39%), Query Frame = 1
Query:   16 LNWQSRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYNAKVXDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANXPITXKSDVYSYGMVLLEIVSGRRNFEVXQETNXKKFFLWAYEXXEKGNVKGIVDKSLAGEDVDIEQVMR 477
            L+W+ R  I +G ARG+ YLH      I+H D+K  NILLD+N+ AKV DFGL+K     D  H   T+V+G+ GYL PE+L    +T KSDVYS+G+V+LE+V GR   +            WA +  +KG ++ I+D  L G+ V +E+V +
Sbjct:  581 LSWRQRLEICVGAARGLHYLHTGSTRAIIHRDVKSANILLDDNFMAKVADFGLSKTGPDLDQTH-VSTAVKGSFGYLDPEYLTRQQLTEKSDVYSFGVVMLEVVCGRPVIDPSLPREKVNLIEWAMKLVKKGKLEDIIDPFLVGK-VKLEEVKK 732          
The following BLAST results are available for this feature:
BLAST of CX290945 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 315
Match NameE-valueIdentityDescription
Y5005_ARATH7.267e-3447.85Probable receptor-like protein kinase At5g20050 OS... [more]
KPRO_MAIZE1.240e-3354.24Putative receptor protein kinase ZmPK1 OS=Zea mays... [more]
SERK5_ARATH4.875e-3042.76Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]
SERK4_ARATH8.315e-3042.76Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
Y1765_ARATH4.127e-2945.10Probable LRR receptor-like serine/threonine-protei... [more]
BAK1_ARATH4.127e-2943.04BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
Y5614_ARATH7.039e-2947.18Probable LRR receptor-like serine/threonine-protei... [more]
SERK1_ARATH2.675e-2843.04Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
Y5343_ARATH4.563e-2844.23Probable LRR receptor-like serine/threonine-protei... [more]
Y2393_ARATH7.783e-2842.21Probable receptor-like protein kinase At2g39360 OS... [more]

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Properties
Property NameValue
Genbank descriptionC03002B01Rv OF1 Citrus clementina cDNA clone C03002B01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290945 ID=CX290945; Name=CX290945; organism=Citrus clementina; type=EST; length=487bp
ACGAGAGGGAAATTGTTGAATTGGCAGAGTAGATTTAACATTGCTCTTGG
AACTGCTAGGGGAATCACATACCTTCATGAGGAGTGTCGGGACTGCATTG
TTCACTGTGACATAAAGCCTGAAAACATCCTCTTAGATGAGAATTACAAT
GCCAAAGTGTNGGATTTTGGCCTTGCAAAGCTCATAAATCCAAAGGACCA
TAGGCACCGAACACTGACGAGCGTTAGAGGGACGAGAGGATATTTAGCGC
CAGAATGGCTAGCAAATNTGCCTATCACCTNGAAGTCTGATGTTTACAGT
TATGGGATGGTTTTGTTGGAGATAGTGAGTGGAAGGAGGAATTTCGAAGT
CTNGCAAGAGACTAATNGAAAAAAGTTCTTTTTGTGGGCCTACGAANAGT
TNGAGAAGGGTAACGTTAAGGGAATTGTTGACAAAAGTTTAGCTGGTGAA
GACGTGGATATTGAGCAAGTTATGAGGGCAATGCAAG
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