CX290956
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX290956 vs. ExPASy Swiss-Prot
Match: HAT9_ARATH (Homeobox-leucine zipper protein HAT9 OS=Arabidopsis thaliana GN=HAT9 PE=2 SV=2) HSP 1 Score: 241.121 bits (614), Expect = 3.429e-63 Identity = 129/201 (64.18%), Postives = 141/201 (70.15%), Query Frame = 1 Query: 10 NSFSSGRVVKRERDLXXXXXXXXXXXXXRASD--EDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHXXXXXXXXXXXXXPLYMHMPAATLTMCPSCERIGGG----------------IADGN-SKGPFPMGTKPHXYSPFTNP 555 +SFSSGRVVKRERD SD EDE+G++ARKKLRLTK+QSALLEESFK HSTLNPKQKQ LARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETL DEN RL P YMHMPA+TLT CPSCERIGGG I DG+ +KG F + +KPH ++PFTNP Sbjct: 70 SSFSSGRVVKRERDGGEESPEEEEMTERVISDYHEDEEGISARKKLRLTKQQSALLEESFKDHSTLNPKQKQVLARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLADENIRLQKEIQELKTLKLTQPFYMHMPASTLTKCPSCERIGGGGGGNGGGGGGSGATAVIVDGSTAKGAFSISSKPHFFNPFTNP 270
BLAST of CX290956 vs. ExPASy Swiss-Prot
Match: HAT22_ARATH (Homeobox-leucine zipper protein HAT22 OS=Arabidopsis thaliana GN=HAT22 PE=1 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 1.702e-62 Identity = 129/198 (65.15%), Postives = 143/198 (72.22%), Query Frame = 1 Query: 10 NSFSSGRVVKRERDLXXXXXXXXXXXXX------RASDE--DEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHXXXXXXXXXXXXXPLYMHMPAATLTMCPSCERIGGGIADGN--------SKGPFPMGTKPHXYSPFTNP 555 +SFSSGRV KRER++ R SD+ DE+GV+ARKKLRLTK+QSALLE++FK HSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRL P YMHMPAATLTMCPSCER+GGG G+ +KG F + TKP Y+PFTNP Sbjct: 78 SSFSSGRV-KREREISGGDGEEEAEETTERVVCSRVSDDHDDEEGVSARKKLRLTKQQSALLEDNFKLHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQDLKALKLSQPFYMHMPAATLTMCPSCERLGGGGVGGDTTAVDEETAKGAFSIVTKPRFYNPFTNP 274
BLAST of CX290956 vs. ExPASy Swiss-Prot
Match: HOX27_ORYSJ (Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. japonica GN=HOX27 PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 1.765e-51 Identity = 98/138 (71.01%), Postives = 111/138 (80.43%), Query Frame = 1 Query: 94 RASDEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHXXXXXXXXXXXXXPLYMHMPAATLTMCPSCERIGGGIADGNSKGP 507 RASD+DE G +ARKKLRL+KEQSA LEESFK+HSTLNPKQK ALA+QLNLRPRQVEVWFQNRRARTKLKQTEVDCE+LK+CCETLT+ENRRLH P YMH+PA TL+MCPSCER+ A ++ P Sbjct: 162 RASDDDE-GASARKKLRLSKEQSAFLEESFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELAELRALKTARPFYMHLPATTLSMCPSCERVASNPATASTSAP 298
BLAST of CX290956 vs. ExPASy Swiss-Prot
Match: HOX27_ORYSI (Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. indica GN=HOX27 PE=2 SV=2) HSP 1 Score: 202.216 bits (513), Expect = 1.765e-51 Identity = 98/138 (71.01%), Postives = 111/138 (80.43%), Query Frame = 1 Query: 94 RASDEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHXXXXXXXXXXXXXPLYMHMPAATLTMCPSCERIGGGIADGNSKGP 507 RASD+DE G +ARKKLRL+KEQSA LEESFK+HSTLNPKQK ALA+QLNLRPRQVEVWFQNRRARTKLKQTEVDCE+LK+CCETLT+ENRRLH P YMH+PA TL+MCPSCER+ A ++ P Sbjct: 162 RASDDDE-GASARKKLRLSKEQSAFLEESFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLHKELAELRALKTARPFYMHLPATTLSMCPSCERVASNPATASTSAP 298
BLAST of CX290956 vs. ExPASy Swiss-Prot
Match: HOX11_ORYSJ (Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. japonica GN=HOX11 PE=2 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 5.678e-50 Identity = 99/150 (66.00%), Postives = 111/150 (74.00%), Query Frame = 1 Query: 94 RASDEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHXXXXXXXXXXXXXPLYMHMPAATLTMCPSCERIGGGIADGNSKGPFPMGTKPHXYSP 543 RASDED DG +ARKKLRL+KEQSA LEESFK+HSTLNPKQK ALA+QLNLRPRQVEVWFQNRRARTKLKQTEVDCE+LK+CCETLT+ENRRL P YMH+PA TL+MCPSCER+ A + T +P Sbjct: 165 RASDED-DGGSARKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELAELRALKTVHPFYMHLPATTLSMCPSCERVASNSAPATASSAATSSTAAPPAAP 313
BLAST of CX290956 vs. ExPASy Swiss-Prot
Match: HOX11_ORYSI (Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. indica GN=HOX11 PE=2 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 5.678e-50 Identity = 99/150 (66.00%), Postives = 111/150 (74.00%), Query Frame = 1 Query: 94 RASDEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHXXXXXXXXXXXXXPLYMHMPAATLTMCPSCERIGGGIADGNSKGPFPMGTKPHXYSP 543 RASDED DG +ARKKLRL+KEQSA LEESFK+HSTLNPKQK ALA+QLNLRPRQVEVWFQNRRARTKLKQTEVDCE+LK+CCETLT+ENRRL P YMH+PA TL+MCPSCER+ A + T +P Sbjct: 78 RASDED-DGGSARKKLRLSKEQSAFLEESFKEHSTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELAELRALKTVHPFYMHLPATTLSMCPSCERVASNSAPATASSAATSSTAAPPAAP 226
BLAST of CX290956 vs. ExPASy Swiss-Prot
Match: HOX19_ORYSJ (Homeobox-leucine zipper protein HOX19 OS=Oryza sativa subsp. japonica GN=HOX19 PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 3.116e-48 Identity = 103/173 (59.54%), Postives = 118/173 (68.21%), Query Frame = 1 Query: 103 DEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLH----------------XXXXXXXXXXXXXPLYMHMPAATLTMCPSCERIGGG-------IADGNSKGPFPMGTKPHXYSPFTN 552 D+D+DG + RKKLRLTKEQSALLE+ F++HSTLNPKQK ALA+QLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLK+CCETLT+ENRRL P YM +PAATLT+CPSCER+GG ADG GP T H ++PFT+ Sbjct: 118 DDDDDG-STRKKLRLTKEQSALLEDRFREHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQRELQELRALKFAPPPPSSAAHQPSPAPPAPFYMQLPAATLTICPSCERVGGPASAAKVVAADGTKAGP-GRTTTHHFFNPFTH 288
BLAST of CX290956 vs. ExPASy Swiss-Prot
Match: HOX19_ORYSI (Homeobox-leucine zipper protein HOX19 OS=Oryza sativa subsp. indica GN=HOX19 PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 3.116e-48 Identity = 103/173 (59.54%), Postives = 118/173 (68.21%), Query Frame = 1 Query: 103 DEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLH----------------XXXXXXXXXXXXXPLYMHMPAATLTMCPSCERIGGG-------IADGNSKGPFPMGTKPHXYSPFTN 552 D+D+DG + RKKLRLTKEQSALLE+ F++HSTLNPKQK ALA+QLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLK+CCETLT+ENRRL P YM +PAATLT+CPSCER+GG ADG GP T H ++PFT+ Sbjct: 118 DDDDDG-STRKKLRLTKEQSALLEDRFREHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCETLTEENRRLQRELQELRALKFAPPPPSSAAHQPSPAPPAPFYMQLPAATLTICPSCERVGGPASAAKVVAADGTKAGP-GRTTTHHFFNPFTH 288
BLAST of CX290956 vs. ExPASy Swiss-Prot
Match: HAT14_ARATH (Homeobox-leucine zipper protein HAT14 OS=Arabidopsis thaliana GN=HAT14 PE=2 SV=3) HSP 1 Score: 186.422 bits (472), Expect = 1.002e-46 Identity = 92/133 (69.17%), Postives = 104/133 (78.20%), Query Frame = 1 Query: 94 RASDEDEDGVNA--RKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHXXXXXXXXXXXXXPLYMHMPAATLTMCPSCERIGGGIA 486 RAS+ED D N RKKLRL+K+QSA LE+SFK+HSTLNPKQK ALA+QLNLRPRQVEVWFQNRRARTKLKQTEVDCE+LK+CCE+LT+ENRRL P YM +PA TLTMCPSCER+ A Sbjct: 175 RASNEDNDDENGSTRKKLRLSKDQSAFLEDSFKEHSTLNPKQKIALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCESLTEENRRLQKEVKELRTLKTSTPFYMQLPATTLTMCPSCERVATSAA 307
BLAST of CX290956 vs. ExPASy Swiss-Prot
Match: HOX15_ORYSJ (Homeobox-leucine zipper protein HOX15 OS=Oryza sativa subsp. japonica GN=HOX15 PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 6.496e-46 Identity = 97/160 (60.62%), Postives = 112/160 (70.00%), Query Frame = 1 Query: 97 ASDEDEDGVNARKKLRLTKEQSALLEESFKQHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLHXXXXXXXXXXXXXPLYMHM------PAATLTMCPSCERIGGGIADGNSKGPFP----MGTKPHXYSPF 546 A+ +D++G N+RKKLRL+KEQSALLE+ FK+HSTLNPKQK ALA+QLNLRPRQVEVWFQNRRARTKLKQTEVDCE LK+CCETLT+ENRRLH M PAATL++CPSCER+ A G S T PH +SPF Sbjct: 82 AAADDDEGCNSRKKLRLSKEQSALLEDRFKEHSTLNPKQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCELLKRCCETLTEENRRLHRELQQLRALTHSTAAGFFMATTLPVPAATLSICPSCERLATAAAAGASPTAAADRTNKPTAPHLFSPF 241 The following BLAST results are available for this feature:
BLAST of CX290956 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290956 ID=CX290956; Name=CX290956; organism=Citrus clementina; type=EST; length=626bpback to top |