CX290958
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX290958 vs. ExPASy Swiss-Prot
Match: CCS_CITSI (Capsanthin/capsorubin synthase, chromoplast OS=Citrus sinensis GN=CCS PE=3 SV=1) HSP 1 Score: 332.413 bits (851), Expect = 5.432e-107 Identity = 155/165 (93.94%), Postives = 155/165 (93.94%), Query Frame = 1 Query: 1 QIIDSTXXXXXXXXXXGRQNACSRKADHHHHHRIRTSKFGNFLELTPESVPEFLDFDLPWFHPSDRIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRPYGRVSRNILKTKLLENC 495 QIIDST GRQNACSRKADHHHHHRIRTSKFGNFLELTPESVPEFLDFDLPWFHPSDRIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRPYGRVSRNILKTKLLENC Sbjct: 18 QIIDSTSSPSFSLFPLGRQNACSRKADHHHHHRIRTSKFGNFLELTPESVPEFLDFDLPWFHPSDRIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRPYGRVSRNILKTKLLENC 182 HSP 2 Score: 75.485 bits (184), Expect = 5.432e-107 Identity = 39/55 (70.91%), Postives = 40/55 (72.73%), Query Frame = 2 Query: 509 LKFHKAKVWHVNHQEFESSIVCDDGNENXASLIXGC*WLC**FLVSMIKPRNHGY 673 +KFHKAKVWHVNHQEFESSIVCDDGNE ASLI F V KPRNHGY Sbjct: 187 VKFHKAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASSF-VEYDKPRNHGY 240
BLAST of CX290958 vs. ExPASy Swiss-Prot
Match: NXS_SOLTU (Neoxanthin synthase, chloroplastic OS=Solanum tuberosum GN=NXS PE=1 SV=1) HSP 1 Score: 186.422 bits (472), Expect = 1.212e-58 Identity = 93/148 (62.84%), Postives = 109/148 (73.65%), Query Frame = 1 Query: 58 NACSRKADHHHHHRIRTSK-FGNFLELTPESVPEFLDFDLPWFHP-SDRIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRPYGRVSRNILKTKLLENC 495 N ++K H R +SK F +FL+L P S PE D ++ P S R ++DVIIIG GPAGLRLAE VS ++ +KVCCVDPSPLS WPNNYGVWVDEFE++GL DCLD WPMTCV INDHKTKYL RPYGRVSR LK +LL +C Sbjct: 31 NPTTKKKSRKCHFRNESSKLFCSFLDLAPISKPESFDVNISLVDPNSGRAQFDVIIIGAGPAGLRLAEHVS-KYGIKVCCVDPSPLSMWPNNYGVWVDEFENLGLEDCLDHKWPMTCVHINDHKTKYLGRPYGRVSRKKLKLRLLNSC 177 HSP 2 Score: 60.077 bits (144), Expect = 1.212e-58 Identity = 30/55 (54.55%), Postives = 36/55 (65.45%), Query Frame = 2 Query: 509 LKFHKAKVWHVNHQEFESSIVCDDGNENXASLIXGC*WLC**FLVSMIKPRNHGY 673 +KF+KAKVW V H+EFESSIVCDDG + SL+ F + KPRNHGY Sbjct: 182 VKFYKAKVWKVEHEEFESSIVCDDGKKIRGSLVVDASGFASDF-IEYDKPRNHGY 235
BLAST of CX290958 vs. ExPASy Swiss-Prot
Match: CCS_CAPAN (Capsanthin/capsorubin synthase, chromoplast OS=Capsicum annuum GN=CCS PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 3.502e-58 Identity = 93/148 (62.84%), Postives = 110/148 (74.32%), Query Frame = 1 Query: 58 NACSRKADHHHHHRIRTSK-FGNFLELTPESVPEFLDFDLPWFHPS-DRIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRPYGRVSRNILKTKLLENC 495 N +K H+R ++S F +FL+L P S PE LD ++ W D +DVIIIGTGPAGLRLAEQVS ++ +KVCCVDPSPLS WPNNYGVWVDEFE +GL DCLD WP++CV I+DHKTKYLDRPYGRVSR LK KLL +C Sbjct: 31 NPTKQKDSRKFHYRNKSSTHFCSFLDLAPTSKPESLDVNISWVDTDLDGAEFDVIIIGTGPAGLRLAEQVS-KYGIKVCCVDPSPLSMWPNNYGVWVDEFEKLGLEDCLDHKWPVSCVHISDHKTKYLDRPYGRVSRKKLKLKLLNSC 177 HSP 2 Score: 55.0694 bits (131), Expect = 3.502e-58 Identity = 30/55 (54.55%), Postives = 35/55 (63.64%), Query Frame = 2 Query: 509 LKFHKAKVWHVNHQEFESSIVCDDGNENXASLIXGC*WLC**FLVSMIKPRNHGY 673 +KF+KAKV V H+EFESSIVCDDG + SLI F + KPRNHGY Sbjct: 182 VKFYKAKVLKVKHEEFESSIVCDDGRKISGSLIVDASGYASDF-IEYDKPRNHGY 235
BLAST of CX290958 vs. ExPASy Swiss-Prot
Match: LCYB_CAPAN (Lycopene beta cyclase, chloroplastic/chromoplastic OS=Capsicum annuum GN=LCY1 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.655e-38 Identity = 66/123 (53.66%), Postives = 88/123 (71.54%), Query Frame = 1 Query: 127 LELTPESVPEFLDFDLPWFHPSDRIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRPYGRVSRNILKTKLLENC 495 LEL PE+ E LDF+LP + PS + D+ ++G GPAGL +A+QVS + VC +DP+P WPNNYGVWVDEFE + L+DCLD TW V+I+D TK L+RPYGRV+R LK+K+++ C Sbjct: 56 LELVPETKKENLDFELPMYDPSKGVVVDLAVVGGGPAGLAVAQQVSEA-GLSVCSIDPNPKLIWPNNYGVWVDEFEAMDLLDCLDATWSGAAVYIDDKTTKDLNRPYGRVNRKQLKSKMMQKC 177 HSP 2 Score: 35.4242 bits (80), Expect = 1.655e-38 Identity = 21/55 (38.18%), Postives = 31/55 (56.36%), Query Frame = 2 Query: 509 LKFHKAKVWHVNHQEFESSIVCDDGNENXASLIXGC*WLC**FLVSMIKPRNHGY 673 +KFH+AKV V H+E +S ++C+DG A+++ LV KP N GY Sbjct: 182 VKFHQAKVIKVIHEESKSMLICNDGITIQATVVLDATGFS-RSLVQYDKPYNPGY 235
BLAST of CX290958 vs. ExPASy Swiss-Prot
Match: LCYB_TOBAC (Lycopene beta cyclase, chloroplastic OS=Nicotiana tabacum GN=LCY1 PE=2 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.156e-38 Identity = 69/129 (53.49%), Postives = 91/129 (70.54%), Query Frame = 1 Query: 109 SKFGNFLELTPESVPEFLDFDLPWFHPSDRIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRPYGRVSRNILKTKLLENC 495 +K LEL PE+ E LDF+LP + PS + D+ ++G GPAGL +A+QVS + V +DPSP WPNNYGVWVDEFE + L+DCLD TW T V+I+D+ TK LDRPYGRV+R LK+K+++ C Sbjct: 52 AKSSALLELVPETKKENLDFELPMYDPSKGLVVDLAVVGGGPAGLAVAQQVSEA-GLSVVSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDATWSGTVVYIDDNTTKDLDRPYGRVNRKQLKSKMMQKC 179 HSP 2 Score: 33.113 bits (74), Expect = 2.156e-38 Identity = 14/33 (42.42%), Postives = 23/33 (69.70%), Query Frame = 2 Query: 509 LKFHKAKVWHVNHQEFESSIVCDDGNENXASLI 607 +KFH AKV V H+E +S ++C+DG A+++ Sbjct: 184 VKFHHAKVIKVIHEEAKSMLICNDGVTIQATVV 216
BLAST of CX290958 vs. ExPASy Swiss-Prot
Match: LCYB_SOLLC (Lycopene beta cyclase, chloroplastic OS=Solanum lycopersicum GN=LCY1 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 6.211e-38 Identity = 65/123 (52.85%), Postives = 87/123 (70.73%), Query Frame = 1 Query: 127 LELTPESVPEFLDFDLPWFHPSDRIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRPYGRVSRNILKTKLLENC 495 LEL PE+ E LDF+LP + PS + D+ ++G GPAGL +A+QVS + VC +DP+P WPNNYGVWVDEFE + L+DCLD TW V+I+D+ K L RPYGRV+R LK+K+++ C Sbjct: 58 LELVPETKKENLDFELPMYDPSKGVVVDLAVVGGGPAGLAVAQQVSEA-GLSVCSIDPNPKLIWPNNYGVWVDEFEAMDLLDCLDATWSGAAVYIDDNTAKDLHRPYGRVNRKQLKSKMMQKC 179 HSP 2 Score: 35.4242 bits (80), Expect = 6.211e-38 Identity = 21/55 (38.18%), Postives = 31/55 (56.36%), Query Frame = 2 Query: 509 LKFHKAKVWHVNHQEFESSIVCDDGNENXASLIXGC*WLC**FLVSMIKPRNHGY 673 +KFH+AKV V H+E +S ++C+DG A+++ LV KP N GY Sbjct: 184 VKFHQAKVIKVIHEESKSMLICNDGITIQATVVLDATGFS-RSLVQYDKPYNPGY 237
BLAST of CX290958 vs. ExPASy Swiss-Prot
Match: LCYB_ARATH (Lycopene beta cyclase, chloroplastic OS=Arabidopsis thaliana GN=LCY1 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.932e-36 Identity = 64/123 (52.03%), Postives = 84/123 (68.29%), Query Frame = 1 Query: 127 LELTPESVPEFLDFDLPWFHPSDRIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRPYGRVSRNILKTKLLENC 495 L+L PE+ E LDF+LP + S D+ I+G GPAGL +A+QVS + VC +DPSP WPNNYGVWVDEFE + L+DCLD TW V++++ K L RPYGRV+R LK+K+L+ C Sbjct: 57 LDLVPETKKENLDFELPLYDTSKSQVVDLAIVGGGPAGLAVAQQVSEA-GLSVCSIDPSPKLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVYVDEGVKKDLSRPYGRVNRKQLKSKMLQKC 178 HSP 2 Score: 38.5058 bits (88), Expect = 1.932e-36 Identity = 23/57 (40.35%), Postives = 33/57 (57.89%), Query Frame = 2 Query: 509 LKFHKAKVWHVNHQEFESSIVCDDGNENXASLIXGC*WL--C**FLVSMIKPRNHGY 673 +KFH++KV +V H+E S++VC DG + AS++ C LV KP N GY Sbjct: 183 VKFHQSKVTNVVHEEANSTVVCSDGVKIQASVVLDATGFSRC---LVQYDKPYNPGY 236
BLAST of CX290958 vs. ExPASy Swiss-Prot
Match: LCYB_NARPS (Lycopene beta cyclase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus GN=LCY1 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.778e-31 Identity = 56/123 (45.53%), Postives = 78/123 (63.41%), Query Frame = 1 Query: 127 LELTPESVPEFLDFDLPWFHPSDRIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRPYGRVSRNILKTKLLENC 495 L+L PE E L+FDLP + PS + D+ ++G GP + + + V +DP+P WPNNYGVWVDEFED+ L+DCLD TW V+++D TK L RPY RV+R LK+K+++ C Sbjct: 62 LDLVPEIKKEHLEFDLPLYDPSKALTLDLAVVGGGPLARSCSTSLGG--GLSVVSIDPNPKLIWPNNYGVWVDEFEDMDLLDCLDATWSGAIVYVDDRSTKNLSRPYARVNRKNLKSKMMKKC 182 HSP 2 Score: 29.261 bits (64), Expect = 4.778e-31 Identity = 19/57 (33.33%), Postives = 28/57 (49.12%), Query Frame = 2 Query: 509 LKFHKAKVWHVNHQEFESSIVCDDGNENXASLIXGC*WL--C**FLVSMIKPRNHGY 673 ++FH+A V H+E +S ++C DG A ++ C LV KP N GY Sbjct: 187 VRFHQATVVKAMHEEEKSYLICSDGVTIDARVVLDATGFSRC---LVQYDKPYNPGY 240
BLAST of CX290958 vs. ExPASy Swiss-Prot
Match: LCYE_ARATH (Lycopene epsilon cyclase, chloroplastic OS=Arabidopsis thaliana GN=LUT2 PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.267e-16 Identity = 44/96 (45.83%), Postives = 61/96 (63.54%), Query Frame = 1 Query: 208 DVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRPYGRVSRNILKTKLLENC 495 D+++IG GPAGL LA + S++ +KV + P T NNYGVW DEF D+GL C++ W T V+++D K + R YGRVSR +L +LL C Sbjct: 110 DLVVIGCGPAGLALAAE-SAKLGLKVGLIGPDLPFT--NNYGVWEDEFNDLGLQKCIEHVWRETIVYLDDDKPITIGRAYGRVSRRLLHEELLRRC 202
BLAST of CX290958 vs. ExPASy Swiss-Prot
Match: LCYE_SOLLC (Lycopene epsilon cyclase, chloroplastic OS=Solanum lycopersicum GN=CRTL-E-1 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.072e-15 Identity = 43/96 (44.79%), Postives = 62/96 (64.58%), Query Frame = 1 Query: 208 DVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRPYGRVSRNILKTKLLENC 495 D+++IG GPAGL LA + S++ + V V P T NNYGVW DEF+D+GL C++ W T V+++D + + R YGRVSR+ L +LL+ C Sbjct: 107 DLVVIGCGPAGLALAAE-SAKLGLNVGLVGPDLPFT--NNYGVWEDEFKDLGLQACIEHVWRDTIVYLDDDEPILIGRAYGRVSRHFLHEELLKRC 199 The following BLAST results are available for this feature:
BLAST of CX290958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290958 ID=CX290958; Name=CX290958; organism=Citrus clementina; type=EST; length=678bpback to top |