CX290985

Overview
NameCX290985
Unique NameCX290985
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length505
Libraries
Library NameType
OF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX290985 vs. ExPASy Swiss-Prot
Match: ALEU_ARATH (Thiol protease aleurain OS=Arabidopsis thaliana GN=ALEU PE=1 SV=2)

HSP 1 Score: 236.498 bits (602), Expect = 5.277e-62
Identity = 111/149 (74.50%), Postives = 131/149 (87.92%), Query Frame = 3
Query:   57 FDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGS 503
            FD+SNPIR+VS DGLR+ E SV Q++GQ+RH LSFARF  RYGK Y++VEEMKLRF+ F +NLDLIRSTN+KGLSY+LG+N+FAD +W+EFQR +LGAAQNCSAT KG+HK+T   LPETKDWRE GIVSPVKDQG CGSCWTFSTTG+
Sbjct:   26 FDESNPIRMVS-DGLREVEESVSQILGQSRHVLSFARFTHRYGKKYQNVEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQRTKLGAAQNCSATLKGSHKVTEAALPETKDWREDGIVSPVKDQGGCGSCWTFSTTGA 173          
BLAST of CX290985 vs. ExPASy Swiss-Prot
Match: ALEUL_ARATH (Thiol protease aleurain-like OS=Arabidopsis thaliana GN=At3g45310 PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 7.620e-61
Identity = 105/149 (70.47%), Postives = 131/149 (87.92%), Query Frame = 3
Query:   57 FDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGS 503
            FD+SNPI++VS D L + E +V+Q++GQ+RH LSF+RF  RYGK Y+SVEEMKLRF+ F +NLDLIRSTN+KGLSY+L LN+FAD +W+EFQR++LGAAQNCSAT KG+HK+T   +P+TKDWRE GIVSPVK+QGHCGSCWTFSTTG+
Sbjct:   26 FDESNPIKMVS-DNLHELEDTVVQILGQSRHVLSFSRFTHRYGKKYQSVEEMKLRFSVFKENLDLIRSTNKKGLSYKLSLNQFADLTWQEFQRYKLGAAQNCSATLKGSHKITEATVPDTKDWREDGIVSPVKEQGHCGSCWTFSTTGA 173          
BLAST of CX290985 vs. ExPASy Swiss-Prot
Match: ORYC_ORYSJ (Oryzain gamma chain OS=Oryza sativa subsp. japonica GN=Os09g0442300 PE=2 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 5.848e-53
Identity = 99/150 (66.00%), Postives = 117/150 (78.00%), Query Frame = 3
Query:   57 FDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKL-TADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGS 503
            FDDSNPIR V+       E++V+  +G+ R AL FARFA R+GK Y    E++ RF  FS++L+L+RSTNR+GL YRLG+N+FAD SWEEFQ  RLGAAQNCSAT  GNH++  A  LPETKDWRE GIVSPVKDQGHCGSCWTFSTTGS
Sbjct:   28 FDDSNPIRSVTDHAASALESTVIAALGRTRDALRFARFAVRHGKRYGDAAEVQRRFRIFSESLELVRSTNRRGLPYRLGINRFADMSWEEFQASRLGAAQNCSATLAGNHRMRDAAALPETKDWREDGIVSPVKDQGHCGSCWTFSTTGS 177          
BLAST of CX290985 vs. ExPASy Swiss-Prot
Match: CYSP2_MAIZE (Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 2.222e-52
Identity = 100/151 (66.23%), Postives = 116/151 (76.82%), Query Frame = 3
Query:   57 FDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKL--TADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGS 503
            F DSNPIR V+       E++V   +G+ R AL FARFA RYGK YES  E+  RF  FS++L L+RSTNRKGLSYRLG+N+FAD SWEEF+  RLGAAQNCSAT  GNH++   A  LPETKDWRE GIVSPVK+QGHCGSCWTFSTTG+
Sbjct:   25 FADSNPIRPVTDRAASALESTVFAALGRTRDALRFARFAVRYGKSYESAAEVHKRFRIFSESLQLVRSTNRKGLSYRLGINRFADMSWEEFRATRLGAAQNCSATLTGNHRMRAAAVALPETKDWREDGIVSPVKNQGHCGSCWTFSTTGA 175          
BLAST of CX290985 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 1.881e-51
Identity = 98/150 (65.33%), Postives = 115/150 (76.67%), Query Frame = 3
Query:   57 FDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKL-TADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGS 503
            F DSNPIR V+       E++VL  +G+ RHAL FARFA RYGK YES  E++ RF  FS++L+ +RSTNRKGL YRLG+N+F+D SWEEFQ  RLGAAQ CSAT  GNH +  A  LPETKDWRE GIVSPVK+Q HCGSCWTFSTTG+
Sbjct:   27 FADSNPIRPVTDRAASTLESAVLGALGRTRHALRFARFAVRYGKSYESAAEVRRRFRIFSESLEEVRSTNRKGLPYRLGINRFSDMSWEEFQATRLGAAQTCSATLAGNHLMRDAAALPETKDWREDGIVSPVKNQAHCGSCWTFSTTGA 176          
BLAST of CX290985 vs. ExPASy Swiss-Prot
Match: CYSP3_SOLLC (Cysteine proteinase 3 OS=Solanum lycopersicum GN=CYP-3 PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 2.457e-51
Identity = 99/149 (66.44%), Postives = 117/149 (78.52%), Query Frame = 3
Query:   57 FDDSNPIRLVSSDGLRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGS 503
            F D NPIR V      + E  +LQV+GQ R ALSFARFA R+ K Y+SVEE+K RF  F  NL +IRS NRKGLSY+LG+N+F D +W+EF++H+LGA+QNCSATTKGN KLT  VLPETKDWR+ GIVSPVK QG CGSCWTFSTTG+
Sbjct:   25 FADKNPIRQVVFPD--ELENGILQVVGQTRSALSFARFAIRHRKRYDSVEEIKQRFEIFLDNLKMIRSHNRKGLSYKLGINEFTDLTWDEFRKHKLGASQNCSATTKGNLKLTNVVLPETKDWRKDGIVSPVKAQGKCGSCWTFSTTGA 171          
BLAST of CX290985 vs. ExPASy Swiss-Prot
Match: CPR3_ARATH (Probable cysteine proteinase At4g11310 OS=Arabidopsis thaliana GN=At4g11310 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 4.519e-21
Identity = 56/133 (42.11%), Postives = 75/133 (56.39%), Query Frame = 3
Query:  123 LQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGA-----AQNCSATTKGNHKLTAD-VLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGS 503
            L  +  A  +L F  +  ++GK+Y SV E + R   F  NL  I + N + LSYRLGL  FAD S  E++    GA       +   T+   +K +AD VLP++ DWR  G V+ VKDQGHC SCW FST G+
Sbjct:   37 LHSVFDAEASLIFESWMVKHGKVYGSVAEKERRLTIFEDNLRFINNRNAENLSYRLGLTGFADLSLHEYKEVCHGADPRPPRNHVFMTSSDRYKTSADDVLPKSVDWRNEGAVTEVKDQGHCRSCWAFSTVGA 169          
BLAST of CX290985 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 5.902e-21
Identity = 58/132 (43.94%), Postives = 74/132 (56.06%), Query Frame = 3
Query:  126 QVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGA----AQNCSATTKGNHKLTA--DVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGS 503
            Q I  A   L F  +  ++GK+Y+SV E + R   F  NL  I + N + LSYRLGLN+FAD S  E+     GA     +N    T  N   T+  DVLP++ DWR  G V+ VKDQG C SCW FST G+
Sbjct:   45 QGIFDAEATLMFESWMVKHGKVYDSVAEKERRLTIFEDNLRFITNRNAENLSYRLGLNRFADLSLHEYGEICHGADPRPPRNHVFMTSSNRYKTSDGDVLPKSVDWRNEGAVTEVKDQGLCRSCWAFSTVGA 176          
BLAST of CX290985 vs. ExPASy Swiss-Prot
Match: XCP2_ARATH (Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 8.523e-20
Identity = 51/120 (42.50%), Postives = 68/120 (56.67%), Query Frame = 3
Query:  159 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKL-----TADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGS 503
            F  +   + K YE+VEE  LRF  F  NL  I  TN+KG SY LGLN+FAD S EEF++  LG   +     +            + +P++ DWR+ G V+ VK+QG CGSCW FST  +
Sbjct:   51 FENWISNFEKAYETVEEKFLRFEVFKDNLKHIDETNKKGKSYWLGLNEFADLSHEEFKKMYLGLKTDIVRRDEERSYAEFAYRDVEAVPKSVDWRKKGAVAEVKNQGSCGSCWAFSTVAA 170          
BLAST of CX290985 vs. ExPASy Swiss-Prot
Match: RD19A_ARATH (Cysteine proteinase RD19a OS=Arabidopsis thaliana GN=RD19A PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 2.480e-19
Identity = 56/148 (37.84%), Postives = 79/148 (53.38%), Query Frame = 3
Query:   84 VSSDGLRDFETSVL-QVIGQARHAL-----SFARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNRKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHK--LTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGS 503
            VSS  + D +  V+ QV+G A   +      F+ F R++GK+Y S EE   RF+ F  NL   R   +   S   G+ +F+D +  EF++  LG           N    L  + LPE  DWR+ G V+PVK+QG CGSCW+FS TG+
Sbjct:   20 VSSSDVNDGDDLVIRQVVGGAEPQVLTSEDHFSLFKRKFGKVYASNEEHDYRFSVFKANLRRARRHQKLDPSATHGVTQFSDLTRSEFRKKHLGVRSGFKLPKDANKAPILPTENLPEDFDWRDHGAVTPVKNQGSCGSCWSFSATGA 167          
The following BLAST results are available for this feature:
BLAST of CX290985 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
ALEU_ARATH5.277e-6274.50Thiol protease aleurain OS=Arabidopsis thaliana GN... [more]
ALEUL_ARATH7.620e-6170.47Thiol protease aleurain-like OS=Arabidopsis thalia... [more]
ORYC_ORYSJ5.848e-5366.00Oryzain gamma chain OS=Oryza sativa subsp. japonic... [more]
CYSP2_MAIZE2.222e-5266.23Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=... [more]
ALEU_HORVU1.881e-5165.33Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
CYSP3_SOLLC2.457e-5166.44Cysteine proteinase 3 OS=Solanum lycopersicum GN=C... [more]
CPR3_ARATH4.519e-2142.11Probable cysteine proteinase At4g11310 OS=Arabidop... [more]
CPR4_ARATH5.902e-2143.94Probable cysteine proteinase At4g11320 OS=Arabidop... [more]
XCP2_ARATH8.523e-2042.50Xylem cysteine proteinase 2 OS=Arabidopsis thalian... [more]
RD19A_ARATH2.480e-1937.84Cysteine proteinase RD19a OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionC03002E08Rv OF1 Citrus clementina cDNA clone C03002E08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX290985 ID=CX290985; Name=CX290985; organism=Citrus clementina; type=EST; length=505bp
TGGTCTCGTCCATCATCTTGTTGCTTTGCTGCGCTGCCGCAGCATCAGCA
TCAAGCTTCGACGACTCCAATCCGATCAGATTGGTATCATCGGACGGTCT
CCGTGACTTCGAGACCTCCGTCCTCCAGGTGATCGGCCAAGCCCGCCATG
CTCTCTCCTTTGCCCGTTTTGCTCGCAGGTATGGAAAGATTTACGAGTCC
GTTGAGGAGATGAAGCTCCGGTTCGCGACTTTCTCCAAGAACTTGGATTT
AATCAGATCTACGAATCGTAAAGGCCTATCTTACAGGCTCGGGTTGAACA
AGTTTGCTGATTGGAGCTGGGAAGAGTTCCAAAGGCACAGGTTGGGAGCT
GCACAAAACTGCTCTGCCACTACAAAAGGAAATCACAAGCTTACTGCTGA
TGTGCTTCCAGAAACGAAAGACTGGAGGGAATCTGGCATAGTAAGCCCAG
TTAAAGACCAAGGTCACTGTGGATCTTGCTGGACTTTCAGCACGACTGGA
TCTCT
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