CX291053

Overview
NameCX291053
Unique NameCX291053
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length481
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14178 contig Ccv1_Contig14178:55..535. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291053 vs. ExPASy Swiss-Prot
Match: TLP_ACTDE (Thaumatin-like protein OS=Actinidia deliciosa GN=tlp PE=1 SV=2)

HSP 1 Score: 216.853 bits (551), Expect = 3.829e-56
Identity = 94/139 (67.63%), Postives = 111/139 (79.86%), Query Frame = 3
Query:   63 FDITNNCPDTVWAAAVPGGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCN 479
            F+I NNCP TVWAAAVPGGG++LD+GQ W I    GTK AR+W RT C FD +G+GKC+TGDCNGLL+CQ +G  PNTLAEYAL QFN++DF D+S +DGFNV MEFS  S  C R IKCTA+I G+CPNEL+ PGGCN
Sbjct:   27 FNIINNCPFTVWAAAVPGGGKRLDRGQNWIINPGAGTKGARVWPRTGCNFDGAGRGKCQTGDCNGLLQCQAFGQPPNTLAEYALNQFNNLDFFDISLVDGFNVAMEFSPTSGGCTRGIKCTADINGQCPNELRAPGGCN 165          
BLAST of CX291053 vs. ExPASy Swiss-Prot
Match: OSL3_ARATH (Osmotin-like protein OSM34 OS=Arabidopsis thaliana GN=OSM34 PE=2 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 1.665e-51
Identity = 87/139 (62.59%), Postives = 110/139 (79.14%), Query Frame = 3
Query:   63 FDITNNCPDTVWAAAVPGGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCN 479
            F+I N C  TVWAAA PGGGR+LD GQ+W +    GTK ARIW RT C FD+SG+G+C+TGDC+G L+C G+G  PNTLAEYAL QFN++DF D+S +DGFN+PMEFS  S +C+R++ CTA+I G+CPN L+ PGGCN
Sbjct:   25 FEILNQCSYTVWAAASPGGGRRLDAGQSWRLDVAAGTKMARIWGRTNCNFDSSGRGRCQTGDCSGGLQCTGWGQPPNTLAEYALNQFNNLDFYDISLVDGFNIPMEFSPTSSNCHRIL-CTADINGQCPNVLRAPGGCN 162          
BLAST of CX291053 vs. ExPASy Swiss-Prot
Match: TPM1_SOLLC (Osmotin-like protein TPM-1 (Fragment) OS=Solanum lycopersicum GN=TPM-1 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 1.841e-50
Identity = 88/142 (61.97%), Postives = 108/142 (76.06%), Query Frame = 3
Query:   63 FDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNR--VIKCTANILGECPNELKVPGGCN 479
            F++ NNCP TVWAA+ P GGGR+LD+GQTW I A  GTK ARIW RT C FD  G+G C+TGDC G+L+C G+G  PNTLAEYAL QF+++DF D+S +DGFN+PM F+  +PS  +   I CTANI GECP  L+VPGGCN
Sbjct:   16 FEVRNNCPYTVWAASTPIGGGRRLDRGQTWVINAPRGTKMARIWGRTNCNFDGDGRGSCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPGSLRVPGGCN 157          
BLAST of CX291053 vs. ExPASy Swiss-Prot
Match: P21_SOYBN (Protein P21 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 2.404e-50
Identity = 87/141 (61.70%), Postives = 108/141 (76.60%), Query Frame = 3
Query:   60 KFDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCN 479
            +F+ITN C  TVWAA+VP GGG QL+ GQ+W++    GTK AR+WART C FD SG+G C+TGDC G+L+C+ YGA PNTLAEY L  FN++DF D+S +DGFNVPM+FS  S  C R I CTA+I G+CP+ELK  GGCN
Sbjct:    2 RFEITNRCTYTVWAASVPVGGGVQLNPGQSWSVDVPAGTKGARVWARTGCNFDGSGRGGCQTGDCGGVLDCKAYGAPPNTLAEYGLNGFNNLDFFDISLVDGFNVPMDFSPTSNGCTRGISCTADINGQCPSELKTQGGCN 142          
BLAST of CX291053 vs. ExPASy Swiss-Prot
Match: PRR1_TOBAC (Pathogenesis-related protein R major form OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 4.101e-50
Identity = 90/139 (64.75%), Postives = 105/139 (75.54%), Query Frame = 3
Query:   63 FDITNNCPDTVWAAAVPGGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRVIKCTANILGECPNELKVPGGCN 479
            FDI N C  TVWAAA PGGGR+LD GQ+W+I   PGT  ARIW RT C FD SG+G CETGDCNG+LECQGYG APNTLAE+AL Q N  DF+D+S +DGFN+PMEFS  +  C R ++CTA I  +CP +LK  GGCN
Sbjct:   28 FDIVNKCTYTVWAAASPGGGRRLDSGQSWSINVNPGTVQARIWGRTNCNFDGSGRGNCETGDCNGMLECQGYGKAPNTLAEFALNQPN-QDFVDISLVDGFNIPMEFSPTNGGC-RNLRCTAPINEQCPAQLKTQGGCN 164          
BLAST of CX291053 vs. ExPASy Swiss-Prot
Match: OLPA_TOBAC (Osmotin-like protein OS=Nicotiana tabacum GN=OLPA PE=1 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 5.355e-50
Identity = 88/142 (61.97%), Postives = 108/142 (76.06%), Query Frame = 3
Query:   63 FDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRV--IKCTANILGECPNELKVPGGCN 479
            F++ NNCP TVWAAA P GGGR+L++GQ+W   A PGTK ARIW RT C FD +G+G C+TGDC G+LEC+G+G  PNTLAEYAL QF+++DF D+S IDGFN+PM F    P   +   I+CTANI GECP  L+VPGGCN
Sbjct:   25 FEVHNNCPYTVWAAATPVGGGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRGWCQTGDCGGVLECKGWGKPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTKPGPGKCHGIQCTANINGECPGSLRVPGGCN 166          
BLAST of CX291053 vs. ExPASy Swiss-Prot
Match: OSMO_TOBAC (Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 6.994e-50
Identity = 87/141 (61.70%), Postives = 109/141 (77.30%), Query Frame = 3
Query:   66 DITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNR--VIKCTANILGECPNELKVPGGCN 479
            ++ NNCP TVWAA+ P GGGR+LD+GQTW I A  GTK AR+W RT C F+A+G+G C+TGDC G+L+C G+G  PNTLAEYAL QF+ +DF D+S +DGFN+PM F+  +PS  +   I CTANI GECP EL+VPGGCN
Sbjct:   25 EVRNNCPYTVWAASTPIGGGRRLDRGQTWVINAPRGTKMARVWGRTNCNFNAAGRGTCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSGLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPRELRVPGGCN 165          
BLAST of CX291053 vs. ExPASy Swiss-Prot
Match: OS13_SOLCO (Osmotin-like protein OSML13 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 6.994e-50
Identity = 87/141 (61.70%), Postives = 108/141 (76.60%), Query Frame = 3
Query:   66 DITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNR--VIKCTANILGECPNELKVPGGCN 479
            ++ NNCP TVWAA+ P GGGR+LD+GQTW I A  GTK ARIW RT C FD +G+G C+TGDC G+L+C G+G  PNTLAEYAL QF+++DF D+S +DGFN+PM F+  +PS  +   I CTANI GECP  L+VPGGCN
Sbjct:   25 EVRNNCPYTVWAASTPIGGGRRLDRGQTWVINAPRGTKMARIWGRTNCNFDGAGRGSCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPGSLRVPGGCN 165          
BLAST of CX291053 vs. ExPASy Swiss-Prot
Match: OS81_SOLCO (Osmotin-like protein OSML81 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 9.135e-50
Identity = 88/141 (62.41%), Postives = 108/141 (76.60%), Query Frame = 3
Query:   66 DITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNR--VIKCTANILGECPNELKVPGGCN 479
            ++ NNCP TVWAA+ P GGGR+L+KGQTW I A  GTK ARIW RT C F+A+G+G C+TGDC G+L+C G+G  PNTLAEYAL QF+++DF D+S +DGFN+PM F+   PS  +   I CTANI GECP  LKVPGGCN
Sbjct:   25 EVRNNCPYTVWAASTPIGGGRRLNKGQTWVINAPRGTKMARIWGRTGCNFNAAGRGSCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTKPSAGKCHAIHCTANINGECPRALKVPGGCN 165          
BLAST of CX291053 vs. ExPASy Swiss-Prot
Match: OS35_SOLCO (Osmotin-like protein OSML15 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 1.558e-49
Identity = 87/142 (61.27%), Postives = 108/142 (76.06%), Query Frame = 3
Query:   63 FDITNNCPDTVWAAAVP-GGGRQLDKGQTWTITAEPGTKAARIWARTKCQFDASGKGKCETGDCNGLLECQGYGAAPNTLAEYALKQFNDMDFIDMSNIDGFNVPMEFSSVSPSCNRV--IKCTANILGECPNELKVPGGCN 479
            F++ NNCP TVWAAA P GGGR+L++GQ+W   A PGTK ARIW RT C FD +G+G C+TGDC G+LEC+G+G  PNTLAEYAL QF+++DF D+S IDGFN+PM F   +P   +   I+C ANI GECP  L+VPGGCN
Sbjct:   25 FEVHNNCPYTVWAAATPIGGGRRLERGQSWWFWAPPGTKMARIWGRTNCNFDGAGRGWCQTGDCGGVLECKGWGKPPNTLAEYALNQFSNLDFWDISVIDGFNIPMSFGPTNPGPGKCHPIQCVANINGECPGSLRVPGGCN 166          
The following BLAST results are available for this feature:
BLAST of CX291053 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
TLP_ACTDE3.829e-5667.63Thaumatin-like protein OS=Actinidia deliciosa GN=t... [more]
OSL3_ARATH1.665e-5162.59Osmotin-like protein OSM34 OS=Arabidopsis thaliana... [more]
TPM1_SOLLC1.841e-5061.97Osmotin-like protein TPM-1 (Fragment) OS=Solanum l... [more]
P21_SOYBN2.404e-5061.70Protein P21 OS=Glycine max PE=1 SV=1[more]
PRR1_TOBAC4.101e-5064.75Pathogenesis-related protein R major form OS=Nicot... [more]
OLPA_TOBAC5.355e-5061.97Osmotin-like protein OS=Nicotiana tabacum GN=OLPA ... [more]
OSMO_TOBAC6.994e-5061.70Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2[more]
OS13_SOLCO6.994e-5061.70Osmotin-like protein OSML13 OS=Solanum commersonii... [more]
OS81_SOLCO9.135e-5062.41Osmotin-like protein OSML81 OS=Solanum commersonii... [more]
OS35_SOLCO1.558e-4961.27Osmotin-like protein OSML15 OS=Solanum commersonii... [more]

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Properties
Property NameValue
Genbank descriptionC03003E04SK OF2 Citrus clementina cDNA clone C03003E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291053 ID=CX291053; Name=CX291053; organism=Citrus clementina; type=EST; length=481bp
CTCTTCCCATTTCTTCTGCTCTTCTTATTATCATTTCCATCACCCTGACT
CATGCTGCCAAATTCGATATCACAAACAATTGCCCCGACACCGTCTGGGC
CGCCGCTGTGCCCGGAGGCGGCAGGCAACTCGACAAGGGTCAAACATGGA
CCATCACCGCCGAGCCAGGCACAAAAGCAGCCCGCATTTGGGCTCGAACC
AAATGCCAGTTTGATGCTTCCGGCAAAGGCAAATGCGAGACCGGTGACTG
TAACGGACTCCTCGAGTGCCAAGGCTACGGTGCAGCACCTAACACCTTGG
CCGAGTACGCGTTGAAGCAATTTAATGACATGGATTTCATTGACATGTCC
AACATTGACGGATTCAATGTTCCCATGGAATTTAGCTCTGTCTCTCCCTC
ATGCAACCGCGTGATCAAGTGCACTGCTAACATTCTTGGCGAGTGCCCGA
ATGAATTGAAGGTTCCTGGAGGATGTAACGG
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