CX291057

Overview
NameCX291057
Unique NameCX291057
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length521
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291057 vs. ExPASy Swiss-Prot
Match: BXL7_ARATH (Probable beta-D-xylosidase 7 OS=Arabidopsis thaliana GN=BXL7 PE=2 SV=2)

HSP 1 Score: 292.352 bits (747), Expect = 8.754e-79
Identity = 135/174 (77.59%), Postives = 157/174 (90.23%), Query Frame = 2
Query:    2 ETPGEDPLVTGKYAVSYVRGVQGDTFNGGK-LKGKLQASACCKHFTAYDLDNWKGTTRYKFDARVTMQDLADTYQPPFESCVKQGRASGIMCAYNRVNGIPSCADRNLLSKTARRLWGFHGYITSDCDAVSIIYDAEGYAKSPEDAVVDVLKAGMDVNCGSFLQKHTKAAVKQK 520
            ETPGEDP++TG YAV+YVRG+QGD+F+G K L   LQASACCKHFTAYDLD WKG TRY F+A+V++ DLA+TYQPPF+ C+++GRASGIMCAYNRVNGIPSCAD NLL++TAR  W F GYITSDCDAVSIIYDA+GYAKSPEDAV DVLKAGMDVNCGS+LQKHTK+A++QK
Sbjct:  167 ETPGEDPMMTGTYAVAYVRGLQGDSFDGRKTLSNHLQASACCKHFTAYDLDRWKGITRYVFNAQVSLADLAETYQPPFKKCIEEGRASGIMCAYNRVNGIPSCADPNLLTRTARGQWAFRGYITSDCDAVSIIYDAQGYAKSPEDAVADVLKAGMDVNCGSYLQKHTKSALQQK 340          
BLAST of CX291057 vs. ExPASy Swiss-Prot
Match: BXL2_ARATH (Probable beta-D-xylosidase 2 OS=Arabidopsis thaliana GN=BXL2 PE=2 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 1.113e-57
Identity = 97/172 (56.40%), Postives = 128/172 (74.42%), Query Frame = 2
Query:    2 ETPGEDPLVTGKYAVSYVRGVQGDTFNGGKLKGKLQASACCKHFTAYDLDNWKGTTRYKFDARVTMQDLADTYQPPFESCVKQGRASGIMCAYNRVNGIPSCADRNLLSKTARRLWGFHGYITSDCDAVSIIYDAEGYAKSPEDAVVDVLKAGMDVNCGSFLQKHTKAAVKQ 517
            ETPGEDP+V GKYA SYVRG+QG+       + +L+ +ACCKHFTAYDLDNW G  R+ F+A+V+ QD+ DT+  PF  CVK+G  + IMC+YN+VNG+P+CAD NLL KT R  WG +GYI SDCD+V ++YD + Y  +PE+A  D +KAG+D++CG FL  HT  AVK+
Sbjct:  172 ETPGEDPVVAGKYAASYVRGLQGND------RSRLKVAACCKHFTAYDLDNWNGVDRFHFNAKVSKQDIEDTFDVPFRMCVKEGNVASIMCSYNQVNGVPTCADPNLLKKTIRNQWGLNGYIVSDCDSVGVLYDTQHYTGTPEEAAADSIKAGLDLDCGPFLGAHTIDAVKK 337          
BLAST of CX291057 vs. ExPASy Swiss-Prot
Match: BXL5_ARATH (Probable beta-D-xylosidase 5 OS=Arabidopsis thaliana GN=BXL5 PE=2 SV=2)

HSP 1 Score: 217.624 bits (553), Expect = 2.740e-56
Identity = 102/173 (58.96%), Postives = 130/173 (75.14%), Query Frame = 2
Query:    2 ETPGEDPLVTGKYAVSYVRGVQGDTFNGGKLKGKLQASACCKHFTAYDLDNWKGTTRYKFDARVTMQDLADTYQPPFESCVKQGRASGIMCAYNRVNGIPSCADRNLLSKTARRLWGFHGYITSDCDAVSIIYDAEGYAKSPEDAVVDVLKAGMDVNCGSFLQKHTKAAVKQK 520
            ETPGEDPLV  KYAV+YV+G+Q D  + GK + +L+ S+CCKH+TAYDLDNWKG  R+ FDA+VT QDL DTYQ PF+SCV++G  S +MC+YNRVNGIP+CAD NLL    R  W   GYI SDCD++ + ++   Y K+ EDAV   LKAG+++NCG FL K+T+ AVK K
Sbjct:  169 ETPGEDPLVVSKYAVNYVKGLQ-DVHDAGKSR-RLKVSSCCKHYTAYDLDNWKGIDRFHFDAKVTKQDLEDTYQTPFKSCVEEGDVSSVMCSYNRVNGIPTCADPNLLRGVIRGQWRLDGYIVSDCDSIQVYFNDIHYTKTREDAVALALKAGLNMNCGDFLGKYTENAVKLK 339          
BLAST of CX291057 vs. ExPASy Swiss-Prot
Match: BXL6_ARATH (Probable beta-D-xylosidase 6 OS=Arabidopsis thaliana GN=BXL6 PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 1.360e-55
Identity = 101/188 (53.72%), Postives = 131/188 (69.68%), Query Frame = 2
Query:    2 ETPGEDPLVTGKYAVSYVRGVQ----------------GDTFNGGKLKGKLQASACCKHFTAYDLDNWKGTTRYKFDARVTMQDLADTYQPPFESCVKQGRASGIMCAYNRVNGIPSCADRNLLSKTARRLWGFHGYITSDCDAVSIIYDAEGYAKSPEDAVVDVLKAGMDVNCGSFLQKHTKAAVKQ 517
            ETPGEDP V  +Y V +VRG Q                 D  +     GKL  SACCKHFTAYDL+ W   TRY F+A VT QD+ DTYQPPFE+C++ G+AS +MC+YN VNG+P+CA  +LL K AR  WGF GYITSDCDAV+ I+  +GY KSPE+AV D +KAG+D+NCG+++ +HT++A++Q
Sbjct:  170 ETPGEDPKVVSEYGVEFVRGFQEKKKRKVLKRRFSDDVDDDRHDDDADGKLMLSACCKHFTAYDLEKWGNFTRYDFNAVVTEQDMEDTYQPPFETCIRDGKASCLMCSYNAVNGVPACAQGDLLQK-ARVEWGFEGYITSDCDAVATIFAYQGYTKSPEEAVADAIKAGVDINCGTYMLRHTQSAIEQ 356          
BLAST of CX291057 vs. ExPASy Swiss-Prot
Match: BXL1_ARATH (Beta-D-xylosidase 1 OS=Arabidopsis thaliana GN=BXL1 PE=1 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 3.704e-53
Identity = 94/172 (54.65%), Postives = 124/172 (72.09%), Query Frame = 2
Query:    2 ETPGEDPLVTGKYAVSYVRGVQGDTFNGGKLKGKLQASACCKHFTAYDLDNWKGTTRYKFDARVTMQDLADTYQPPFESCVKQGRASGIMCAYNRVNGIPSCADRNLLSKTARRLWGFHGYITSDCDAVSIIYDAEGYAKSPEDAVVDVLKAGMDVNCGSFLQKHTKAAVKQ 517
            ETPGEDP+V  KYA SYVRG+QG T  G +LK     +ACCKH+TAYDLDNW G  R+ F+A+VT QDL DTY  PF+SCV +G+ + +MC+YN+VNG P+CAD NLL  T R  W  +GYI SDCD+V + ++ + Y  +PE+A    +KAG+D++CG FL   T+ AVK+
Sbjct:  177 ETPGEDPIVAAKYAASYVRGLQG-TAAGNRLK----VAACCKHYTAYDLDNWNGVDRFHFNAKVTQQDLEDTYNVPFKSCVYEGKVASVMCSYNQVNGKPTCADENLLKNTIRGQWRLNGYIVSDCDSVDVFFNQQHYTSTPEEAAARSIKAGLDLDCGPFLAIFTEGAVKK 343          
BLAST of CX291057 vs. ExPASy Swiss-Prot
Match: BXL4_ARATH (Beta-D-xylosidase 4 OS=Arabidopsis thaliana GN=BXL4 PE=1 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.078e-52
Identity = 94/171 (54.97%), Postives = 124/171 (72.51%), Query Frame = 2
Query:    2 ETPGEDPLVTGKYAVSYVRGVQGDTFNGGKLKGKLQASACCKHFTAYDLDNWKGTTRYKFDARVTMQDLADTYQPPFESCVKQGRASGIMCAYNRVNGIPSCADRNLLSKTARRLWGFHGYITSDCDAVSIIYDAEGYAKSPEDAVVDVLKAGMDVNCGSFLQKHTKAAVK 514
            ETPGEDPL+  KYA  YV+G+Q    +GG    +L+ +ACCKH+TAYD+DNWKG  RY F+A VT QD+ DTYQPPF+SCV  G  + +MC+YN+VNG P+CAD +LLS   R  W  +GYI SDCD+V ++Y  + Y K+P +A    + AG+D+NCGSFL +HT+ AVK
Sbjct:  187 ETPGEDPLLASKYASGYVKGLQET--DGGD-SNRLKVAACCKHYTAYDVDNWKGVERYSFNAVVTQQDMDDTYQPPFKSCVVDGNVASVMCSYNQVNGKPTCADPDLLSGVIRGEWKLNGYIVSDCDSVDVLYKNQHYTKTPAEAAAISILAGLDLNCGSFLGQHTEEAVK 354          
BLAST of CX291057 vs. ExPASy Swiss-Prot
Match: BXL3_ARATH (Beta-D-xylosidase 3 OS=Arabidopsis thaliana GN=BXL3 PE=1 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 8.538e-50
Identity = 90/171 (52.63%), Postives = 122/171 (71.35%), Query Frame = 2
Query:    2 ETPGEDPLVTGKYAVSYVRGVQGDTFNGGKLKGKLQASACCKHFTAYDLDNWKGTTRYKFDARVTMQDLADTYQPPFESCVKQGRASGIMCAYNRVNGIPSCADRNLLSKTARRLWGFHGYITSDCDAVSIIYDAEGYAKSPEDAVVDVLKAGMDVNCGSFLQKHTKAAVK 514
            ETPGEDP ++ KYAV+YV+G+Q    +GG    +L+ +ACCKH+TAYD+DNW+   R  F+A V  QDLADT+QPPF+SCV  G  + +MC+YN+VNG P+CAD +LLS   R  W  +GYI SDCD+V +++  + YAK+PE+AV   L AG+D+NC  F  +H   AVK
Sbjct:  177 ETPGEDPTLSSKYAVAYVKGLQET--DGGD-PNRLKVAACCKHYTAYDIDNWRNVNRLTFNAVVNQQDLADTFQPPFKSCVVDGHVASVMCSYNQVNGKPTCADPDLLSGVIRGQWQLNGYIVSDCDSVDVLFRKQHYAKTPEEAVAKSLLAGLDLNCDHFNGQHAMGAVK 344          
BLAST of CX291057 vs. ExPASy Swiss-Prot
Match: BGLS_RHIRD (Beta-glucosidase OS=Rhizobium radiobacter GN=cbg-1 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.574e-11
Identity = 42/125 (33.60%), Postives = 59/125 (47.20%), Query Frame = 2
Query:    2 ETPGEDPLVTGKYAVSYVRGVQGDTFNGGKLKGKLQASACCKHFTAYDLDNWKGTTRYKFDARVTMQDLADTYQPPFESCVKQGRASGIMCAYNRVNGIPSCADRNLLSKTARRLWGFHGYITSD 376
            E   EDP +T   AV+Y+ GVQ               +A  KHF A + +  + T     D R     L + Y PPFE  VK+     +M +YN++NG  +  +  LL+K  R  WGF G + SD
Sbjct:  113 ECYSEDPALTAACAVAYINGVQSQG-----------VAATIKHFVANESEIERQTMSSDVDERT----LREIYLPPFEEAVKKAGVKAVMSSYNKLNGTYTSENPWLLTKVLREEWGFDGVVMSD 222          
BLAST of CX291057 vs. ExPASy Swiss-Prot
Match: BGLX_SALTY (Periplasmic beta-glucosidase OS=Salmonella typhimurium GN=bglX PE=3 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 4.580e-11
Identity = 51/169 (30.18%), Postives = 78/169 (46.15%), Query Frame = 2
Query:   11 GEDPLVTGKYAVSYVRGVQGDTFNGGKLKGKLQASACCKHFTAYDLDNWKGTTRYKFDARVTMQDLADTYQPPFESCVKQGRASGIMCAYNRVNGIPSCADRNLLSKTARRLWGFHGYITSDCDAVSIIYDAEGYAKSPEDAVVDVLKAGMDVN-CGSFLQKHTKAAVK 514
            GED  +T     + V+ +QG +        +       KHF AY     +G   Y     ++ Q L + Y PP+++ +  G +  +M A N +NG P+ +D  LL    R  WGF G   SD  A+  +    G A  PEDAV   LKAG+D++    +  K+    +K
Sbjct:  175 GEDTYLTSIMGETMVKAMQGKS-----PADRYSVMTSVKHFAAYGAV--EGGKEYN-TVDMSSQRLFNDYMPPYKAGLDAG-SGAVMVALNSLNGTPATSDSWLLKDVLRDEWGFKGITVSDHGAIKELI-KHGTAADPEDAVRVALKAGVDMSMADEYYSKYLPGLIK 333          
BLAST of CX291057 vs. ExPASy Swiss-Prot
Match: BGLB_CLOTH (Thermostable beta-glucosidase B OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=bglB PE=1 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 5.982e-11
Identity = 40/126 (31.75%), Postives = 64/126 (50.79%), Query Frame = 2
Query:   14 EDPLVTGKYAVSYVRGVQGDTFNGGKLKGKLQASACCKHFTAYDLDNWKGTTRYKFDARVTMQDLADTYQPPFESCVKQGRASGIMCAYNRVNGIPSCADRNLLSKTARRLWGFHGYITSDCDAVS 391
            EDP ++ + A S+++GVQ                AC KHF A + ++ + T     D  V  + L + Y   FE+ VK+ R   +MCAYN++NG     +R LL++  +  W   G++ SD  AV+
Sbjct:  126 EDPYLSSELAASHIKGVQSQG-----------VGACLKHFAANNQEHRRMTV----DTIVDERTLREIYFASFENAVKKARPWVVMCAYNKLNGEYCSENRYLLTEVLKNEWMHDGFVVSDWGAVN 236          
The following BLAST results are available for this feature:
BLAST of CX291057 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
BXL7_ARATH8.754e-7977.59Probable beta-D-xylosidase 7 OS=Arabidopsis thalia... [more]
BXL2_ARATH1.113e-5756.40Probable beta-D-xylosidase 2 OS=Arabidopsis thalia... [more]
BXL5_ARATH2.740e-5658.96Probable beta-D-xylosidase 5 OS=Arabidopsis thalia... [more]
BXL6_ARATH1.360e-5553.72Probable beta-D-xylosidase 6 OS=Arabidopsis thalia... [more]
BXL1_ARATH3.704e-5354.65Beta-D-xylosidase 1 OS=Arabidopsis thaliana GN=BXL... [more]
BXL4_ARATH1.078e-5254.97Beta-D-xylosidase 4 OS=Arabidopsis thaliana GN=BXL... [more]
BXL3_ARATH8.538e-5052.63Beta-D-xylosidase 3 OS=Arabidopsis thaliana GN=BXL... [more]
BGLS_RHIRD1.574e-1133.60Beta-glucosidase OS=Rhizobium radiobacter GN=cbg-1... [more]
BGLX_SALTY4.580e-1130.18Periplasmic beta-glucosidase OS=Salmonella typhimu... [more]
BGLB_CLOTH5.982e-1131.75Thermostable beta-glucosidase B OS=Clostridium the... [more]
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Properties
Property NameValue
Genbank descriptionC03003E09SK OF2 Citrus clementina cDNA clone C03003E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291057 ID=CX291057; Name=CX291057; organism=Citrus clementina; type=EST; length=521bp
GGAGACACCTGGCGAGGATCCATTGGTTACTGGGAAATATGCAGTGTCTT
ATGTGAGAGGCGTTCAAGGTGATACTTTTAATGGAGGGAAGCTTAAAGGG
AAGCTTCAAGCTTCTGCTTGTTGTAAGCATTTTACTGCTTATGATTTGGA
CAACTGGAAGGGCACCACTCGTTACAAGTTTGATGCTCGTGTGACGATGC
AAGATTTAGCTGACACATACCAGCCTCCATTTGAGAGCTGTGTGAAGCAA
GGAAGAGCCAGTGGAATAATGTGTGCTTACAATAGAGTTAATGGAATACC
AAGCTGTGCTGATCGCAATCTCTTATCCAAAACTGCCAGAAGACTGTGGG
GGTTCCACGGGTACATAACATCAGACTGTGATGCGGTGTCCATCATCTAT
GATGCTGAAGGATATGCTAAATCACCCGAAGATGCTGTTGTCGATGTGCT
TAAAGCAGGCATGGATGTCAATTGTGGATCCTTCTTGCAAAAACACACCA
AAGCAGCAGTAAAGCAGAAAA
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