CX291095

Overview
NameCX291095
Unique NameCX291095
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length631
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291095 vs. ExPASy Swiss-Prot
Match: TRNH1_ARATH (Tropinone reductase homolog At1g07440 OS=Arabidopsis thaliana GN=At1g07440 PE=1 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 9.741e-66
Identity = 121/187 (64.71%), Postives = 148/187 (79.14%), Query Frame = 3
Query:   69 NQRWTVQGMTALVTGGTKGLGHAVVEELAELGATVHTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGVVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSV 629
            +QRW+++  T LVTGGTKG+GHA+VEE A  GA +HTC+RNE +L+EC+  W+ KGF+VTGSVCD S R EREKL+  VSS+F GKL+ILINN+G    K T++YTAEDFSF ++TN ESAY+L QLAHPLLKASG  +I+ MSS+ GVVS    GSIY ATKGA+N LAR LACEWA D IR N+V
Sbjct:    7 SQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVS-ASVGSIYSATKGALNQLARNLACEWASDGIRANAV 192          
BLAST of CX291095 vs. ExPASy Swiss-Prot
Match: TRNH_DATST (Tropinone reductase homolog OS=Datura stramonium PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 6.981e-64
Identity = 116/187 (62.03%), Postives = 150/187 (80.21%), Query Frame = 3
Query:   69 NQRWTVQGMTALVTGGTKGLGHAVVEELAELGATVHTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGVVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSV 629
            ++RW+++GMTALVTGGT+G+G+A+VEELA  GA V+TCSR++ DL EC+  W+ KGFKV+G VCDVSS  +R+ L+  V+S F+GKLNILINN GTTI K    +TAED+S +M TNFE++YNLCQLAHPLLKASG ASIV  SS  GV++ V   SIY A+KGA+N + + LACEWA+D+IR N+V
Sbjct:   10 DRRWSLRGMTALVTGGTRGIGYAIVEELANFGAEVYTCSRSQNDLDECLEKWRRKGFKVSGPVCDVSSISQRQTLMESVTSSFNGKLNILINNAGTTIPKEATNFTAEDYSIIMGTNFEASYNLCQLAHPLLKASGNASIVFNSSAAGVIA-VPLSSIYAASKGAINQVTKSLACEWAKDSIRVNAV 195          
BLAST of CX291095 vs. ExPASy Swiss-Prot
Match: TRN1_DATST (Tropinone reductase 1 OS=Datura stramonium GN=TR1 PE=1 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.275e-57
Identity = 103/185 (55.68%), Postives = 143/185 (77.30%), Query Frame = 3
Query:   75 RWTVQGMTALVTGGTKGLGHAVVEELAELGATVHTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGVVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSV 629
            RW+++G TALVTGG+KG+G+A+VEELA LGA V+TCSRNE +L EC+  W+ KG  V GSVCD+ SR ER+KL+  V+ +FDGKLNIL+NN G  I K   ++T +D++ +M TNFE+AY+L Q+A+PLLKAS   +++ +SS+ G  S + + S+Y A+KGA+N + + LACEWA+DNIR NSV
Sbjct:   16 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAG-FSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSV 199          
BLAST of CX291095 vs. ExPASy Swiss-Prot
Match: TRN2_DATST (Tropinone reductase 2 OS=Datura stramonium GN=TR2 PE=1 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 1.665e-57
Identity = 105/185 (56.76%), Postives = 143/185 (77.30%), Query Frame = 3
Query:   75 RWTVQGMTALVTGGTKGLGHAVVEELAELGATVHTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGVVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSV 629
            RW ++G TALVTGG++G+G+ +VEELA LGA+V+TCSRN+ +L++C+  W++KGFKV  SVCD+SSR ER++L+N V++ F GKLNIL+NN G  I K   +YT ED+S +M+ NFE+AY+L  LAHP LKAS   ++V +SSV G ++ V   ++YGATKGAM+ L R LA EWA+DNIR N V
Sbjct:    4 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALA-VPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGV 187          
BLAST of CX291095 vs. ExPASy Swiss-Prot
Match: TRN2_HYONI (Tropinone reductase 2 OS=Hyoscyamus niger GN=TR2 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 3.141e-56
Identity = 104/185 (56.22%), Postives = 138/185 (74.59%), Query Frame = 3
Query:   75 RWTVQGMTALVTGGTKGLGHAVVEELAELGATVHTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGVVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSV 629
            RW ++G TALVTGG++G+G+ +VEELA LGA+V+TCSRN+ +L EC+  W++KGF V  SVCD+SSR ERE+ +  VS+ F GKLNIL+NN G  I K   +YT ED+S +M+ NFE+AY+L  LAHP LKAS   ++V +SS+ G  S +   ++YGATKGAM+ L R LA EWA+DNIR N V
Sbjct:    4 RWNLEGCTALVTGGSRGIGYGIVEELANLGASVYTCSRNQKELDECLTQWRSKGFNVEASVCDLSSRSEREEFMKTVSNHFHGKLNILVNNAGIVIYKEAKDYTMEDYSHIMSINFEAAYHLSVLAHPFLKASERGNVVFISSISG-ASALPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGV 187          
BLAST of CX291095 vs. ExPASy Swiss-Prot
Match: DHRS4_RAT (Dehydrogenase/reductase SDR family member 4 OS=Rattus norvegicus GN=Dhrs4 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.092e-16
Identity = 57/176 (32.39%), Postives = 90/176 (51.14%), Query Frame = 3
Query:   99 ALVTGGTKGLGHAVVEELAELGATVHTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTT-IRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGVVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTN 623
            ALVT  T G+G A+   LAE GA V   SR + ++   +   + +G  VTG VC V    +REKL+N    L  G ++IL++N          ++ T E ++ +++ N  ++  + +   P ++  G  S+V++SSV G V     G  Y  +K A+  L +  A E A  NIR N
Sbjct:   17 ALVTASTDGIGLAIARRLAEDGAHVVISSRKQQNVDRAVATLQGEGLSVTGVVCHVGKAEDREKLVNMALKLHQG-IDILVSNAAVNPFFGNLMDVTEEVWNKVLSINVTASAMMIKAVVPAMEKRGGGSVVIVSSVAGFVLFPSLGP-YNVSKTALLGLTKNFAAELAPKNIRVN 190          
BLAST of CX291095 vs. ExPASy Swiss-Prot
Match: RHLG_PSEAE (Rhamnolipids biosynthesis 3-oxoacyl-[acyl-carrier-protein] reductase OS=Pseudomonas aeruginosa GN=rhlG PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.420e-16
Identity = 54/188 (28.72%), Postives = 94/188 (50.00%), Query Frame = 3
Query:   78 WTVQGMTALVTGGTKGLGHAVVEELAELGATVHTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAAS----IVLMSSVCGVVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSV 629
            +++ G  ALVTGG++G+G  + + L E GA V  C+R+    ++        G        D+SS     +L   +  L   +L+IL+NN GT+   A   Y    +  +M  N  S ++  Q   PLL+ S +A     ++ + SV G+ ++ +    YG +K A++ L+R+LA E   ++I  N +
Sbjct:    5 FSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQALGEL-SARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVI 190          
BLAST of CX291095 vs. ExPASy Swiss-Prot
Match: DHK1_STRVN (Granaticin polyketide synthase putative ketoacyl reductase 1 OS=Streptomyces violaceoruber GN=gra-orf5 PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 2.690e-15
Identity = 58/182 (31.87%), Postives = 93/182 (51.10%), Query Frame = 3
Query:   99 ALVTGGTKGLGHAVVEELAELGATVHTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAAS-----IVLMSSVCGVVSVVDAGSIYGATKGAMNHLARILACEWAQDNIRTNSV 629
            ALVTG T G+G A+   LA LGA    C+R+E  L++ +++ + +GF V G+VCDV+   +    +      + G ++IL+NN G +   AT E   E +  ++ TN  S +    +   +L A G  +     I+ ++S  G   VV A   Y A+K  +  L + L  E A+  I  N+V
Sbjct:   20 ALVTGATSGIGLAIARRLAALGARTFLCARDEERLAQTVKELRGEGFDVDGTVCDVADPAQIRAYVAAAVQRY-GTVDILVNNAGRSGGGATAEIADELWLDVITTNLTSVF---LMTKEVLNAGGMLAKKRGRIINIASTGGKQGVVHAVP-YSASKHGVVGLTKALGLELARTGITVNAV 196          
BLAST of CX291095 vs. ExPASy Swiss-Prot
Match: GNO_GLUOX (Gluconate 5-dehydrogenase OS=Gluconobacter oxydans GN=gno PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 5.992e-15
Identity = 55/188 (29.26%), Postives = 100/188 (53.19%), Query Frame = 3
Query:   78 WTVQGMTALVTGGTKGLGHAVVEELAELGATVHTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFD--GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLMSSVCGVVSVVDAGSI--YGATKGAMNHLARILACEWAQDNIRTNSV 629
            +++ G  ALVTG ++G+G  + + LA  GA V    RN   L      ++ +G K + +V DV+   +++ +I+ V+++    G ++ILINN G   R    E++ +D+  LM+TN  + + + Q     +   G   IV   ++C V S +    I  Y ATKGA+ +L + +A +W +  ++ N +
Sbjct:    7 FSLSGARALVTGASRGIGLTLAKGLARYGAEVVLNGRNAESLDSAQSGFEAEGLKASTAVFDVT---DQDAVIDGVAAIERDMGPIDILINNAGIQRRAPLEEFSRKDWDDLMSTNVNAVFFVGQAVARHMIPRGRGKIV---NICSVQSELARPGIAPYTATKGAVKNLTKGMATDWGRHGLQINGL 188          
BLAST of CX291095 vs. ExPASy Swiss-Prot
Match: MTDH_AGABI (NADP-dependent mannitol dehydrogenase OS=Agaricus bisporus GN=mtdH PE=1 SV=3)

HSP 1 Score: 80.4925 bits (197), Expect = 7.826e-15
Identity = 60/188 (31.91%), Postives = 89/188 (47.34%), Query Frame = 3
Query:   96 TALVTGGTKGLGHAVVEELAELGATVHTCSRNEADLSECIRD-WKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPL-LKASGAASIVLMSSVCGVVSVVDAGSI--------YGATKGAMNHLARILACEWAQDNIRTNSV 629
            T +VTGG +G+G A    +A  GA V    R+  D  E      K  G K     CDVS+     K I Q+ +   G ++ LI N G ++ K   E T EDF F+   N    +N C+    L L+     SIV+ SS+     +++  S+        Y ++K A ++L + LA EWA   IR N++
Sbjct:   13 TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAKDAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL-GAISGLIANAGVSVVKPATELTHEDFKFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSS--QIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNAL 197          
The following BLAST results are available for this feature:
BLAST of CX291095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
TRNH1_ARATH9.741e-6664.71Tropinone reductase homolog At1g07440 OS=Arabidops... [more]
TRNH_DATST6.981e-6462.03Tropinone reductase homolog OS=Datura stramonium P... [more]
TRN1_DATST1.275e-5755.68Tropinone reductase 1 OS=Datura stramonium GN=TR1 ... [more]
TRN2_DATST1.665e-5756.76Tropinone reductase 2 OS=Datura stramonium GN=TR2 ... [more]
TRN2_HYONI3.141e-5656.22Tropinone reductase 2 OS=Hyoscyamus niger GN=TR2 P... [more]
DHRS4_RAT1.092e-1632.39Dehydrogenase/reductase SDR family member 4 OS=Rat... [more]
RHLG_PSEAE5.420e-1628.72Rhamnolipids biosynthesis 3-oxoacyl-[acyl-carrier-... [more]
DHK1_STRVN2.690e-1531.87Granaticin polyketide synthase putative ketoacyl r... [more]
GNO_GLUOX5.992e-1529.26Gluconate 5-dehydrogenase OS=Gluconobacter oxydans... [more]
MTDH_AGABI7.826e-1531.91NADP-dependent mannitol dehydrogenase OS=Agaricus ... [more]

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Properties
Property NameValue
Genbank descriptionC03004A07SK OF2 Citrus clementina cDNA clone C03004A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291095 ID=CX291095; Name=CX291095; organism=Citrus clementina; type=EST; length=631bp
TGAAGTTCACTTAACTTTTATCACCTTTATTTCGAATGGCGCCTCCGACG
AACGGCAATGGCAGGCTCAATCAGAGATGGACTGTCCAGGGCATGACTGC
GCTTGTAACTGGTGGAACCAAAGGACTAGGTCATGCTGTAGTGGAGGAAC
TGGCTGAGCTTGGTGCCACTGTGCATACATGCTCTAGGAATGAAGCAGAT
CTTAGTGAATGCATACGTGACTGGAAAACCAAAGGCTTCAAAGTCACCGG
TTCAGTGTGCGATGTATCGTCTCGAATTGAACGGGAAAAGCTTATAAACC
AAGTCTCCTCTCTGTTCGATGGAAAACTTAACATTCTCATAAACAACGTC
GGGACGACTATAAGAAAGGCGACTGTGGAGTACACAGCAGAAGATTTCTC
GTTTCTCATGGCTACCAATTTTGAGTCTGCTTACAATCTGTGCCAACTTG
CACATCCTCTTTTGAAAGCTTCGGGGGCAGCAAGTATTGTTCTAATGTCT
TCTGTTTGTGGGGTGGTGTCAGTTGTTGACGCTGGATCCATATATGGAGC
TACGAAAGGAGCCATGAACCATCTTGCGAGGATTTTGGCATGCGAGTGGG
CTCAAGACAATATTAGGACCAATTCTGTCAC
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