CX291099

Overview
NameCX291099
Unique NameCX291099
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length515
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig5831 contig Ccv1_Contig5831:426..939. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291099 vs. ExPASy Swiss-Prot
Match: RETOL_ARATH (Reticuline oxidase-like protein OS=Arabidopsis thaliana GN=At4g20830 PE=1 SV=2)

HSP 1 Score: 224.557 bits (571), Expect = 2.172e-58
Identity = 105/166 (63.25%), Postives = 124/166 (74.70%), Query Frame = 2
Query:   11 NLRSIDVDVKDESAWVEAGATLGELYYRIWQKSKLHGYPAGVCPTVXXXXXXXXXXXXNMLRKFGLSTDNVVDAKIVDVRGRILDRKAMGEDLFWAIRGGGGASFGVVLAYKIKLVPVPETVTVFRAERLLAENATDVVYKWQLVAPATDDNLFMRMLFAACYKKQ 508
            N+R + VD+   SAW+ AGATLGE+YYRIW+KS++HG+PAGVCPTV            NM+RKFGLS D V DAKIVDV GR+LDRKAMGEDLFWAI GGGG S+GVVL YK+KLVPVP  VTVFR E+ +   A D+V+KWQ V P TD NLFMRML     +K+
Sbjct:  140 NIRDVSVDIASNSAWISAGATLGEVYYRIWEKSRVHGFPAGVCPTVGVGGHLSGGGYGNMVRKFGLSVDYVEDAKIVDVNGRVLDRKAMGEDLFWAITGGGGGSYGVVLGYKVKLVPVPSVVTVFRVEQYMDSGAVDMVHKWQSVGPKTDPNLFMRMLIQPVTRKK 305          
BLAST of CX291099 vs. ExPASy Swiss-Prot
Match: RETO_ESCCA (Reticuline oxidase OS=Eschscholzia californica GN=BBE1 PE=1 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 9.166e-41
Identity = 82/166 (49.40%), Postives = 113/166 (68.07%), Query Frame = 2
Query:   11 NLRSIDVDVKDESAWVEAGATLGELYYRIWQKSKLHGYPAGVCPTVXXXXXXXXXXXXNMLRKFGLSTDNVVDAKIVDVRGRILDRKAMGEDLFWAIRGGGGASFGVVLAYKIKLVPVPETVTVFRAERLLA-ENATDVVYKWQLVAPATDDNLFMRMLFAACYKK 505
            NL  + +D++ E+AWVE+G+TLGELYY I + S   G+ AG CPTV             M RK+GL+ DNVVDA ++D  G ILDR+AMGED+FWAIRGGGG  +G + A+KIKL+PVPE VTVFR  + +A + AT +++KWQ VA   +++  + +L  A  K+
Sbjct:  124 NLNRVSIDLESETAWVESGSTLGELYYAITESSSKLGFTAGWCPTVGTGGHISGGGFGMMSRKYGLAADNVVDAILIDANGAILDRQAMGEDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVTVFRVTKNVAIDEATSLLHKWQFVAEELEEDFTLSVLGGADEKQ 289          
BLAST of CX291099 vs. ExPASy Swiss-Prot
Match: RETO_PAPSO (Reticuline oxidase OS=Papaver somniferum GN=BBE1 PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 3.851e-39
Identity = 80/159 (50.31%), Postives = 108/159 (67.92%), Query Frame = 2
Query:   11 NLRSIDVDVKDESAWVEAGATLGELYYRIWQKSKLHGYPAGVCPTVXXXXXXXXXXXXNMLRKFGLSTDNVVDAKIVDVRGRILDRKAMGEDLFWAIRGGGGASFGVVLAYKIKLVPVPETVTVFRAERLLA-ENATDVVYKWQLVAPATDDNLFMRML 484
            NL  I +DV  E+AWVE+GATLGELYY I Q +   G+ AG CPTV             M RK+GL+ DNVVDA ++D  G ILDR+ MG+D+FWAIRGGGG  +G + A+KIKL+PVPE +TVFR  + +  E+A+ +++KWQ VA   D++  + +L
Sbjct:  128 NLNRISIDVLSETAWVESGATLGELYYAIAQSTDTLGFTAGWCPTVGSGGHISGGGFGMMSRKYGLAADNVVDAILIDSNGAILDREKMGDDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKLTVFRVTKNVGIEDASSLLHKWQYVADELDEDFTVSVL 286          
BLAST of CX291099 vs. ExPASy Swiss-Prot
Match: YVDP_BACSU (Uncharacterized FAD-linked oxidoreductase yvdP OS=Bacillus subtilis GN=yvdP PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.013e-12
Identity = 49/155 (31.61%), Postives = 75/155 (48.39%), Query Frame = 2
Query:   11 NLRSIDVDVKDESAWVEAGATLGELYYRIWQKSKLHGYPAGVCPTVXXXXXXXXXXXXNMLRKFGLSTDNVVDAKIVDVRGRILDR-KAMGEDLFWAIRGGGGASFGVVLAYKIKLVPVPETVTVFRAERLLAENATDVVYK-WQLVAPATDDNL 469
            ++  + +D ++  A V+ G  +G L   + +   +   P G  PTV             + R  GL +DN++  K VD +GRI+   ++  EDL WA RGGGG +FG    Y  K+   P+T TVF    +      + V+K WQ  AP  D+ L
Sbjct:   85 DMNKVFLDEENAIATVQTGIPVGPLVKGLARDGFMA--PFGDSPTVGIGGITMGGGFGVLSRSIGLISDNLLALKTVDAKGRIIHADQSHNEDLLWASRGGGGGNFGYNTQYTFKVHRAPKTATVFNI--IWPWEQLETVFKAWQKWAPFVDERL 235          
BLAST of CX291099 vs. ExPASy Swiss-Prot
Match: YGAK_BACSU (Uncharacterized FAD-linked oxidoreductase ygaK OS=Bacillus subtilis GN=ygaK PE=3 SV=4)

HSP 1 Score: 70.4774 bits (171), Expect = 5.241e-12
Identity = 50/162 (30.86%), Postives = 79/162 (48.77%), Query Frame = 2
Query:   14 LRSIDVDVKDESAWVEAGATLGELYYRIWQKSKLHGYPAGVCPTVXXXXXXXXXXXXNMLRKFGLSTDNVVDAKIVDVRGRILDRKAMGE----------DLFWAIRGGGGASFGVVLAYKIKLVPVPETVTVFRAERLLAENATDVVYKWQLVAPATDDNL 469
            ++ I V+   + A++EAGA LGE+Y  +WQ       PAG    V             + R  GL+ D++V  +++     + D K   +          DLFWA +GGGG +FG+V +   K VP+ + V++F +     ++  +V   WQ  AP TDD L
Sbjct:   85 MKKITVNQDKKLAYIEAGAELGEVYRTLWQYGLT--LPAGTIANVGLTGLTLGGGIGLLTRAAGLTCDSLVQLEMI-----VADEKEGADLITVSCSNHPDLFWASQGGGGGNFGIVTSMTFKAVPISQ-VSIF-SITWGWDDFEEVYNTWQNWAPYTDDRL 237          
The following BLAST results are available for this feature:
BLAST of CX291099 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RETOL_ARATH2.172e-5863.25Reticuline oxidase-like protein OS=Arabidopsis tha... [more]
RETO_ESCCA9.166e-4149.40Reticuline oxidase OS=Eschscholzia californica GN=... [more]
RETO_PAPSO3.851e-3950.31Reticuline oxidase OS=Papaver somniferum GN=BBE1 P... [more]
YVDP_BACSU4.013e-1231.61Uncharacterized FAD-linked oxidoreductase yvdP OS=... [more]
YGAK_BACSU5.241e-1230.86Uncharacterized FAD-linked oxidoreductase ygaK OS=... [more]
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Properties
Property NameValue
Genbank descriptionC03004A11SK OF2 Citrus clementina cDNA clone C03004A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291099 ID=CX291099; Name=CX291099; organism=Citrus clementina; type=EST; length=515bp
CACGAGGTTCAATTTACGGTCGATTGATGTTGATGTCAAAGACGAGTCCG
CTTGGGTCGAAGCTGGCGCCACATTGGGTGAACTTTACTACAGGATTTGG
CAAAAAAGTAAACTGCACGGCTATCCTGCCGGCGTCTGCCCCACCGTCGG
CGTTGGCGGCCACTTGAGCGGCGGCGGGTACGGCAACATGTTGAGAAAAT
TTGGATTGTCCACCGACAATGTTGTTGACGCCAAGATTGTTGATGTTCGG
GGGAGGATTCTCGATAGGAAAGCAATGGGGGAGGATCTTTTTTGGGCGAT
CAGAGGCGGCGGCGGAGCGAGTTTCGGTGTTGTGCTGGCTTATAAGATCA
AGTTGGTTCCCGTTCCGGAGACGGTTACCGTGTTTAGAGCTGAAAGGCTT
TTGGCTGAGAATGCAACGGATGTGGTCTATAAATGGCAGTTGGTGGCGCC
GGCCACGGATGATAATTTGTTTATGAGAATGCTTTTTGCAGCCTGTTACA
AGAAACAAGAAGCCG
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