CX291147

Overview
NameCX291147
Unique NameCX291147
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length616
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig345 contig Ccv1_Contig345:1..616. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291147 vs. ExPASy Swiss-Prot
Match: LAC7_ARATH (Laccase-7 OS=Arabidopsis thaliana GN=LAC7 PE=2 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 5.988e-65
Identity = 104/146 (71.23%), Postives = 124/146 (84.93%), Query Frame = 3
Query:  177 EHSFQVKNLTIGRLCRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIM 614
            EH+F V+NLT+ RLC++Q IT VNGSLPGPTIRV+EGD+L++HV N SP+NITIHWHGIF   ++WADGP+MITQCPI+PG  Y Y+F I  QEGTLWWHAH S LRATV+GA +IRPKSGH YPFPKP KEVPI+ GEWWN D++
Sbjct:   27 EHTFNVQNLTVSRLCKRQVITVVNGSLPGPTIRVKEGDSLVIHVLNHSPHNITIHWHGIFHKLTVWADGPSMITQCPIQPGQRYAYRFNITGQEGTLWWHAHASFLRATVYGALVIRPKSGHSYPFPKPHKEVPILFGEWWNTDVV 172          
BLAST of CX291147 vs. ExPASy Swiss-Prot
Match: LAC9_ARATH (Laccase-9 OS=Arabidopsis thaliana GN=LAC9 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.024e-56
Identity = 92/145 (63.45%), Postives = 117/145 (80.69%), Query Frame = 3
Query:  177 EHSFQVKNLTIGRLCRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDI 611
            EH   VK++ +  LC++Q I  VNGSLPGPTI V+EGDTL+VHV N+S YN+TIHWHG+FQ++S+W DG NMITQCPI+P N++TY+F I  QEGTL WHAH+  LRAT+HGA IIRP+SG  YPFPKP KEVP++  +WW+ D+
Sbjct:   29 EHVLHVKDVVVTPLCKEQMIPIVNGSLPGPTINVREGDTLVVHVINKSTYNVTIHWHGVFQLKSVWMDGANMITQCPIQPSNNFTYQFDITGQEGTLLWHAHVVNLRATIHGALIIRPRSGRPYPFPKPYKEVPLIFQQWWDTDV 173          
BLAST of CX291147 vs. ExPASy Swiss-Prot
Match: LAC24_ORYSJ (Laccase-24 OS=Oryza sativa subsp. japonica GN=LAC24 PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 1.478e-55
Identity = 94/147 (63.95%), Postives = 119/147 (80.95%), Query Frame = 3
Query:  177 EHSFQVKNLTIGRLCRQQTI-TAVNGSLPGPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHK-YPFPKPDKEVPIVLGEWWNDDI 611
            E++F V NL+I +LC+Q+ I TAVNG LPGPTI   EGDT++VH+ NESPYN+TIHWHGIFQ  + WADGP M+TQCP+RPG +YTY+F +  QEGTLWWH+H S LRATV+GA II+P+ G K YPFP PD+EV ++LGEWW  ++
Sbjct:   27 EYTFNVGNLSISQLCQQEMIITAVNGQLPGPTIVATEGDTVVVHMVNESPYNMTIHWHGIFQRGTPWADGPAMVTQCPVRPGGNYTYRFNVTGQEGTLWWHSHFSFLRATVYGALIIKPRGGAKAYPFPVPDEEVVVILGEWWKTNV 173          
BLAST of CX291147 vs. ExPASy Swiss-Prot
Match: LAC8_ARATH (Laccase-8 OS=Arabidopsis thaliana GN=LAC8 PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 4.301e-55
Identity = 90/145 (62.07%), Postives = 116/145 (80.00%), Query Frame = 3
Query:  177 EHSFQVKNLTIGRLCRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDI 611
            EH   ++++ +  LC++Q I A NGSLPGPTI V+EGDTL+V+V N S YN+TIHWHG+FQ++S+W DG NMITQCPI+PG ++TY+F I  QEGTL WHAH+  LRAT+HGA +IRP+SG  YPFPKP KEVPIV  +WW+ D+
Sbjct:   29 EHVLHIQDVVVKPLCKEQIIPAANGSLPGPTINVREGDTLVVNVINNSTYNVTIHWHGVFQLKSVWMDGANMITQCPIQPGYNFTYQFDITGQEGTLLWHAHVVNLRATLHGALVIRPRSGRPYPFPKPYKEVPIVFQQWWDTDV 173          
BLAST of CX291147 vs. ExPASy Swiss-Prot
Match: LAC7_ORYSJ (Laccase-7 OS=Oryza sativa subsp. japonica GN=LAC7 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.135e-54
Identity = 90/145 (62.07%), Postives = 114/145 (78.62%), Query Frame = 3
Query:  180 HSFQVKNLTIGRLCRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIM 614
            ++F V+++ + RLC    I AVNG LPGP I V EGD + V V N SPYN+TIHWHGI Q+ + WADGP+M+TQCPI+P +SYTY+F +  QEGTLWWHAH S LRATV+GA IIRP++G  YPFP PD+EVPIVLGEWW+ +++
Sbjct:   33 YTFTVESMRVSRLCNSTDIIAVNGLLPGPMIEVNEGDAVAVEVINGSPYNLTIHWHGILQLLTPWADGPSMVTQCPIQPNSSYTYRFNVTGQEGTLWWHAHSSFLRATVYGALIIRPRNGSAYPFPAPDQEVPIVLGEWWSRNVV 177          
BLAST of CX291147 vs. ExPASy Swiss-Prot
Match: LAC25_ORYSJ (Laccase-25 OS=Oryza sativa subsp. japonica GN=LAC25 PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 5.258e-53
Identity = 89/144 (61.81%), Postives = 114/144 (79.17%), Query Frame = 3
Query:  177 EHSFQVKNLTIGRLCRQQTI-TAVNGSLPGPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHK-YPFPKPDKEVPIVLGEWWN 602
            EH+F V N +I +LC+   I TAVNG LPGPTI  +EGDT++VH+ N SPY++T+HWHG+ Q  + WADGP M+TQCP++PG +YTY+F +  QEGTLWWHAH+S  RATV+GA +IRP+ G K YPFPKPDKE  ++LGEWWN
Sbjct:   26 EHTFNVGNFSISQLCQPPLIITAVNGQLPGPTIYAREGDTVVVHLVNTSPYSMTLHWHGVLQRGTPWADGPAMVTQCPVQPGGNYTYRFNVDGQEGTLWWHAHVSFHRATVYGALVIRPRGGAKAYPFPKPDKEHVVILGEWWN 169          
BLAST of CX291147 vs. ExPASy Swiss-Prot
Match: LAC6_ORYSJ (Laccase-6 OS=Oryza sativa subsp. japonica GN=LAC6 PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 1.530e-52
Identity = 84/146 (57.53%), Postives = 113/146 (77.40%), Query Frame = 3
Query:  177 EHSFQVKNLTIGRLCR--QQTITAVNGSLPGPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDD 608
            EH+F V  L++ R+C+    ++TAVNG +PGP +  +EGDT+++HV N+SPYN+T+HWHG+FQ  + WADGP M+TQCPIRPG+ YTY+F +  QEGTLWWHAH S +RATV+GA +IRP+    YPFP P +E  ++LGEWWN D
Sbjct:   26 EHTFNVATLSLPRICQPGNTSVTAVNGRVPGPQVEAREGDTVVIHVINDSPYNVTVHWHGVFQRGTPWADGPAMVTQCPIRPGHRYTYRFAVAGQEGTLWWHAHSSYMRATVYGALVIRPRRAGGYPFPTPYEEKTVLLGEWWNGD 171          
BLAST of CX291147 vs. ExPASy Swiss-Prot
Match: LAC14_ORYSJ (Laccase-14 OS=Oryza sativa subsp. japonica GN=LAC14 PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 1.998e-52
Identity = 91/146 (62.33%), Postives = 109/146 (74.66%), Query Frame = 3
Query:  177 EHSFQVKNLTIGRLCRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQCPIRP----GNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWN 602
            EH+F V NLT+ RL ++Q ITAVNG  PGP +  + GDTL+V V N SPYNITIHWHG+ Q  S WADGP M+TQCPI P    G+SYTY+F +  QEGTLWWHAH+S LRATV+GA +IRP+ G  YPFP P  E  ++LGEWWN
Sbjct:   34 EHTFHVGNLTVERLGQRQVITAVNGQFPGPKVEARNGDTLLVRVVNNSPYNITIHWHGVLQRLSAWADGPAMVTQCPILPGSGAGSSYTYRFNVTGQEGTLWWHAHVSFLRATVYGALLIRPRPGVPYPFPAPHAEHTLLLGEWWN 179          
BLAST of CX291147 vs. ExPASy Swiss-Prot
Match: LAC3_ORYSJ (Laccase-3 OS=Oryza sativa subsp. japonica GN=LAC3 PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 9.917e-52
Identity = 85/143 (59.44%), Postives = 107/143 (74.83%), Query Frame = 3
Query:  180 HSFQVKNLTIGRLCRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDD 608
            H F V+   + RLC+   +  VNG LPGPT+ V+EGDT++++V N + YN+TIHWHGI Q R+ WADGP  +TQCPI+PG SY Y+F I  QEGTLWWHAH S LRATV+GA IIRP+    YPF KP +EVP++LGEWW+ D
Sbjct:   29 HEFIVQETPVKRLCKTHNVITVNGQLPGPTLEVREGDTVVINVVNHAQYNVTIHWHGIRQFRTGWADGPEFVTQCPIKPGGSYKYRFTIEGQEGTLWWHAHSSWLRATVYGALIIRPRENKTYPFEKPAREVPLILGEWWDAD 171          
BLAST of CX291147 vs. ExPASy Swiss-Prot
Match: LAC15_ORYSJ (Laccase-15 OS=Oryza sativa subsp. japonica GN=LAC15 PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 4.922e-51
Identity = 84/146 (57.53%), Postives = 110/146 (75.34%), Query Frame = 3
Query:  177 EHSFQVKNLTIGRLCRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATVHGAFIIRPKSG-HKYPFPKPDKEVPIVLGEWWNDDI 611
            EH+F V  + +  LC++   T VNG LPGPTI V EGD++ VHV N+SPYN+TIHWHG++Q+ + W DG  MITQ PI+P +++TY+F +  QEGTLWWHAH + LR TVHGA IIRP+ G   YPFP+P +EVPI++GEWW  D+
Sbjct:   42 EHTFVVSQVNMTHLCKEMAFTVVNGQLPGPTIEVTEGDSVTVHVVNKSPYNLTIHWHGVYQLLNCWNDGVPMITQRPIQPNHNFTYRFNVAGQEGTLWWHAHDAFLRGTVHGALIIRPRHGAASYPFPRPHREVPIIIGEWWEKDL 187          
The following BLAST results are available for this feature:
BLAST of CX291147 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
LAC7_ARATH5.988e-6571.23Laccase-7 OS=Arabidopsis thaliana GN=LAC7 PE=2 SV=... [more]
LAC9_ARATH1.024e-5663.45Laccase-9 OS=Arabidopsis thaliana GN=LAC9 PE=2 SV=... [more]
LAC24_ORYSJ1.478e-5563.95Laccase-24 OS=Oryza sativa subsp. japonica GN=LAC2... [more]
LAC8_ARATH4.301e-5562.07Laccase-8 OS=Arabidopsis thaliana GN=LAC8 PE=2 SV=... [more]
LAC7_ORYSJ2.135e-5462.07Laccase-7 OS=Oryza sativa subsp. japonica GN=LAC7 ... [more]
LAC25_ORYSJ5.258e-5361.81Laccase-25 OS=Oryza sativa subsp. japonica GN=LAC2... [more]
LAC6_ORYSJ1.530e-5257.53Laccase-6 OS=Oryza sativa subsp. japonica GN=LAC6 ... [more]
LAC14_ORYSJ1.998e-5262.33Laccase-14 OS=Oryza sativa subsp. japonica GN=LAC1... [more]
LAC3_ORYSJ9.917e-5259.44Laccase-3 OS=Oryza sativa subsp. japonica GN=LAC3 ... [more]
LAC15_ORYSJ4.922e-5157.53Laccase-15 OS=Oryza sativa subsp. japonica GN=LAC1... [more]

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Properties
Property NameValue
Genbank descriptionC03004F05SK OF2 Citrus clementina cDNA clone C03004F05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291147 ID=CX291147; Name=CX291147; organism=Citrus clementina; type=EST; length=616bp
CACGAGCTAATTTCTTCATTTGCATAAGATTTCTTTACATTCCTCATATT
TTTTGGAGCTTTCTTTAAGCCAACATTAATTCTCTTCAGACTTCTAACAT
GGCGCGTTCCATGCTTTTGCTAGCATGCGCTTTAGTTGTTTTAGCTTCTT
CTACCTTGTCTTCAGCAGCAGTCGTGGAACACTCATTCCAAGTGAAAAAC
TTGACGATTGGGCGGCTGTGCCGACAGCAAACGATAACGGCGGTTAACGG
GAGCCTCCCTGGTCCGACGATACGCGTTCAAGAGGGTGACACTCTGATTG
TTCATGTCTCCAACGAGTCGCCTTATAACATCACTATTCACTGGCATGGA
ATATTTCAGATTCGAAGCATCTGGGCAGATGGACCAAACATGATAACTCA
GTGTCCAATAAGACCTGGAAATAGCTACACTTACAAATTTAGAATCATCA
ATCAAGAAGGAACCCTTTGGTGGCATGCTCACATCTCAATGCTGCGAGCC
ACCGTCCACGGTGCTTTTATCATCCGCCCTAAGTCTGGTCACAAGTATCC
ATTTCCTAAACCCGATAAAGAAGTTCCCATTGTTCTCGGAGAGTGGTGGA
ATGACGATATCATGGA
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