CX291152

Overview
NameCX291152
Unique NameCX291152
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length593
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10356 contig Ccv1_Contig10356:623..1215. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291152 vs. ExPASy Swiss-Prot
Match: ASO_TOBAC (L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE=2 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 8.652e-74
Identity = 134/193 (69.43%), Postives = 147/193 (76.17%), Query Frame = 2
Query:   14 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGF 592
            QTLL+NGRGQ+NCSLAA FS     QCKLRG EQ APQIL V+PNK YRLR+            +  HKMVVVEADGNYVQPF V DMDIYSGESYSVL  T+QDP+ NYWIS  VRGR+P TP  LTLLNY P SASK P  PPPI P W+DY+HSKSFSNKIFALMGSPKPP   HRR+ LLNTQN I+G+
Sbjct:  195 QTLLLNGRGQYNCSLAARFSKPPLPQCKLRGGEQYAPQILRVRPNKIYRLRVASTTALGSLSLAIGGHKMVVVEADGNYVQPFSVQDMDIYSGESYSVLFKTDQDPTKNYWISINVRGREPKTPQGLTLLNYLPNSASKFPTLPPPIAPLWNDYNHSKSFSNKIFALMGSPKPPPQNHRRIILLNTQNKIDGY 387          
BLAST of CX291152 vs. ExPASy Swiss-Prot
Match: ASO_CUCSA (L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 2.205e-69
Identity = 122/193 (63.21%), Postives = 151/193 (78.24%), Query Frame = 2
Query:   14 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGF 592
            Q++LING+GQF+CS+AA ++ G  +QC+L G E+CAP ILHVQP KTYR+RI            + NH+++VVEADGNYVQPF   D+DIYSGESYSVL+TT+Q+P  NYW+S GVR R P TPP LTLLNY P SASK+P+SPPP TP W+D+D SK+F+ +IFA MGSPKPP  ++RRL LLNTQN INGF
Sbjct:  203 QSILINGKGQFDCSIAAKYNQG-LKQCELSGKEKCAPFILHVQPKKTYRIRIASTTALASLNFAIGNHELLVVEADGNYVQPFVTSDIDIYSGESYSVLITTDQNPLENYWVSIGVRARLPKTPPGLTLLNYLPNSASKLPISPPPETPHWEDFDRSKNFTFRIFAAMGSPKPPVRYNRRLFLLNTQNRINGF 394          
BLAST of CX291152 vs. ExPASy Swiss-Prot
Match: ASO_CUCPM (L-ascorbate oxidase OS=Cucurbita pepo var. melopepo PE=1 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 4.159e-68
Identity = 119/193 (61.66%), Postives = 146/193 (75.65%), Query Frame = 2
Query:   14 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGF 592
            QT+L+NGRGQF+CS+AA + + + E CKL+G+E CAP I HV P KTYR+RI            + NH+++VVEADGNYVQPF   D+DIYSGESYSVL+TT+Q+PS NYW+S G R R P TPP LTLLNY P S SK+P SPPP TP WDD+D SK+F+ +I A MGSPKPP  F+RR+ LLNTQN ING+
Sbjct:  168 QTILLNGRGQFDCSIAAKYDS-NLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQNVINGY 359          
BLAST of CX291152 vs. ExPASy Swiss-Prot
Match: ASO_CUCMA (L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=1 SV=2)

HSP 1 Score: 255.373 bits (651), Expect = 1.580e-67
Identity = 119/193 (61.66%), Postives = 145/193 (75.13%), Query Frame = 2
Query:   14 QTLLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFHRRLTLLNTQNTINGF 592
            QT+L+NGRGQF+CS+AA + + + E CKL+G+E CAP I HV P KTYR+RI            + NH ++VVEADGNYVQPF   D+DIYSGESYSVL+TT+Q+PS NYW+S G RGR P TPP LTLLNY P S SK+P SPPP TP WDD+D SK+F+ +I A MGSPKPP   +RR+ LLNTQN ING+
Sbjct:  198 QTILLNGRGQFDCSIAAKYDS-NLEPCKLKGSEPCAPYIFHVMPKKTYRIRIASTTALAALNFAIGNHPLLVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRGRHPNTPPGLTLLNYLPNSVSKLPTSPPPETPAWDDFDRSKNFTYRITAAMGSPKPPVKSNRRIFLLNTQNVINGY 389          
BLAST of CX291152 vs. ExPASy Swiss-Prot
Match: SKS1_ARATH (Monocopper oxidase-like protein SKS1 OS=Arabidopsis thaliana GN=SKS1 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.241e-13
Identity = 45/153 (29.41%), Postives = 72/153 (47.06%), Query Frame = 2
Query:  134 HVQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYHPTSASKIPLSPPPITPR------WDDYDHSKSFSNKIFALMGSPKPPTNFH-RRLTLLNT 571
            HV+P KTYR+R+            ++NH +++VE +G+Y       D D++ G+SYS L+T +QD + +Y+I A  R         +T +     S SK P+S P   P+      W      K+      A    P P  +FH  ++ + NT
Sbjct:  217 HVEPGKTYRIRVHNVGISTSLNFRIQNHSLLLVETEGHYTSQANFTDFDVHVGQSYSFLVTMDQDATSDYYIVASARFVNETVWQRVTGVAILHYSNSKGPVSGPLPVPKTDVSSPWSAMSQPKTIRQNTSASGARPNPQGSFHYGQINITNT 369          
BLAST of CX291152 vs. ExPASy Swiss-Prot
Match: SKS2_ARATH (Monocopper oxidase-like protein SKS2 OS=Arabidopsis thaliana GN=SKS2 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.478e-12
Identity = 47/182 (25.82%), Postives = 83/182 (45.60%), Query Frame = 2
Query:   20 LLINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALT---LLNYHPT---SASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFH 547
            +LING+G F         N S       G E    + ++V P KTYR+R+            ++NHK++++E +G Y       D D++ G+SYS L+T +Q+ + +Y+I A  R         +T   +L+Y  +   ++  +P+S   +   W   +  ++      A    P P  +FH
Sbjct:  192 VLINGKGPFKY-------NSSVPD----GIEH---ETVNVDPGKTYRIRVHNVGISTSLNFRIQNHKLLLIETEGRYTSQMNFTDFDVHVGQSYSFLVTMDQNATSDYYIVASARFVNETVWQRVTGVGILHYSNSKGPASGPLPVSATDVNHPWSAMNQPRAIKQNTSASGARPNPQGSFH 359          
BLAST of CX291152 vs. ExPASy Swiss-Prot
Match: LAC1_AGABI (Laccase-1 OS=Agaricus bisporus GN=lcc1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.606e-11
Identity = 46/136 (33.82%), Postives = 63/136 (46.32%), Query Frame = 2
Query:   23 LINGRGQFNCSLAAHFSNGSAEQCKLRGNEQCAPQILHVQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPP------ALTLLNYH 412
            LING+G+FN      F+                  +++V+  K YRLR+            V NH +V +EADG    P EV ++DIY+ +  SV+L  NQ P  NYWI A + G  P   P       L +L YH
Sbjct:  194 LINGKGRFNGGPLTPFA------------------VVNVRRGKRYRLRVIAISCRPFFTFSVDNHSLVFMEADGVEHDPVEVQNVDIYAAQRVSVILHANQ-PIDNYWIRAPMTGGNPDRNPNLNISLTLAILRYH 310          
BLAST of CX291152 vs. ExPASy Swiss-Prot
Match: ASOL_BRANA (L-ascorbate oxidase homolog OS=Brassica napus GN=Bp10 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.578e-11
Identity = 48/173 (27.75%), Postives = 86/173 (49.71%), Query Frame = 2
Query:  101 RGNEQCAPQILHVQPNKTYRLRIXXXXXXXXXXXXVKNHKMVVVEADGNYVQPFEVDDMDIYSGESYSVLLTTNQDPSYNYWISAGVRGRKPATPPALTLLNYH---PTSASKIPLSPPPITPRWDDYDHSKSFSNKIFALMGSPKPPTNFH-------RRLTLLNTQNTING 589
            +G+   AP +  ++P KTYR+RI            ++NHKM +VE +G++V   + D +D++ G+ +  ++T NQ+P  +Y++ A  R  K        LL Y      ++S++P    P+   W   +  +SF   + A    P P  ++H       R + L+NTQ  ++G
Sbjct:  200 KGDGSDAP-LFTLKPGKTYRVRICNVGVKTSINFRIQNHKMKLVEMEGSHVLQNDYDSLDVHVGQCFGTIVTANQEPK-DYYMVASSRFLKTVI-TTTGLLRYEGGKGPASSQLPAG--PVGWAW-SLNQFRSFRWNLTASAARPNPQGSYHYGKINITRTIKLVNTQGKVDG 366          
The following BLAST results are available for this feature:
BLAST of CX291152 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
ASO_TOBAC8.652e-7469.43L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE... [more]
ASO_CUCSA2.205e-6963.21L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1[more]
ASO_CUCPM4.159e-6861.66L-ascorbate oxidase OS=Cucurbita pepo var. melopep... [more]
ASO_CUCMA1.580e-6761.66L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=... [more]
SKS1_ARATH2.241e-1329.41Monocopper oxidase-like protein SKS1 OS=Arabidopsi... [more]
SKS2_ARATH2.478e-1225.82Monocopper oxidase-like protein SKS2 OS=Arabidopsi... [more]
LAC1_AGABI1.606e-1133.82Laccase-1 OS=Agaricus bisporus GN=lcc1 PE=1 SV=1[more]
ASOL_BRANA3.578e-1127.75L-ascorbate oxidase homolog OS=Brassica napus GN=B... [more]
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Properties
Property NameValue
Genbank descriptionC03004F10SK OF2 Citrus clementina cDNA clone C03004F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291152 ID=CX291152; Name=CX291152; organism=Citrus clementina; type=EST; length=593bp
TATACACACACATCAGACACTGCTGATAAACGGAAGAGGGCAATTCAATT
GTTCACTGGCGGCGCATTTTAGCAACGGCTCGGCGGAACAGTGCAAGTTA
AGAGGGAATGAACAGTGCGCACCCCAGATCCTGCATGTTCAACCAAACAA
GACCTACAGGCTCAGGATAGCTAGTACCACTGCACTCGCTTCACTCAACT
TGGCTGTCAAGAATCACAAAATGGTGGTTGTGGAGGCTGATGGAAATTAC
GTGCAACCATTTGAAGTAGATGACATGGACATATATTCTGGTGAGAGCTA
TTCGGTCTTATTAACAACAAATCAAGATCCCTCCTATAATTACTGGATCT
CAGCTGGTGTTAGGGGAAGAAAACCTGCAACCCCTCCGGCCCTAACACTC
TTAAACTATCATCCCACTTCTGCTTCCAAAATCCCTCTCTCCCCACCACC
TATAACCCCTAGATGGGACGACTATGATCACAGCAAATCATTCTCCAACA
AAATATTTGCCCTAATGGGATCCCCCAAGCCTCCCACAAATTTCCACCGT
CGGCTCACCCTTCTTAACACTCAAAACACCATTAACGGGTTCA
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