CX291158

Overview
NameCX291158
Unique NameCX291158
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length156
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291158 vs. ExPASy Swiss-Prot
Match: CALS3_ARATH (Callose synthase 3 OS=Arabidopsis thaliana GN=CALS3 PE=2 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 8.643e-23
Identity = 42/48 (87.50%), Postives = 48/48 (100.00%), Query Frame = 2
Query:   11 VVAFLLITVSIWFMVGTWLFAPFLFNPSGFEWQKIIDDWTDWNKWISN 154
            V+A+LLIT+S+WFMVGTWLFAPFLFNPSGFEWQKI+DDWTDWNKWI+N
Sbjct: 1694 VLAYLLITISMWFMVGTWLFAPFLFNPSGFEWQKIVDDWTDWNKWINN 1741          
BLAST of CX291158 vs. ExPASy Swiss-Prot
Match: CALS2_ARATH (Callose synthase 2 OS=Arabidopsis thaliana GN=CALS2 PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 1.630e-21
Identity = 42/48 (87.50%), Postives = 45/48 (93.75%), Query Frame = 2
Query:   11 VVAFLLITVSIWFMVGTWLFAPFLFNPSGFEWQKIIDDWTDWNKWISN 154
            VV ++LITVSIWFMV TWLFAPFLFNPSGFEWQKI+DDWTDWNKWI N
Sbjct: 1680 VVTYILITVSIWFMVVTWLFAPFLFNPSGFEWQKIVDDWTDWNKWIYN 1727          
BLAST of CX291158 vs. ExPASy Swiss-Prot
Match: CALS1_ARATH (Callose synthase 1 OS=Arabidopsis thaliana GN=CALS1 PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 1.630e-21
Identity = 42/48 (87.50%), Postives = 45/48 (93.75%), Query Frame = 2
Query:   11 VVAFLLITVSIWFMVGTWLFAPFLFNPSGFEWQKIIDDWTDWNKWISN 154
            VV ++LITVSIWFMV TWLFAPFLFNPSGFEWQKI+DDWTDWNKWI N
Sbjct: 1679 VVTYILITVSIWFMVVTWLFAPFLFNPSGFEWQKIVDDWTDWNKWIYN 1726          
BLAST of CX291158 vs. ExPASy Swiss-Prot
Match: CALS6_ARATH (Putative callose synthase 6 OS=Arabidopsis thaliana GN=CALS6 PE=3 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 4.908e-18
Identity = 33/45 (73.33%), Postives = 41/45 (91.11%), Query Frame = 2
Query:   20 FLLITVSIWFMVGTWLFAPFLFNPSGFEWQKIIDDWTDWNKWISN 154
            +L ITVS+WFMVG+WLFAPF+FNPSGFEWQK +DDWTDW +W+ +
Sbjct: 1655 YLYITVSMWFMVGSWLFAPFIFNPSGFEWQKTVDDWTDWKRWLGD 1699          
BLAST of CX291158 vs. ExPASy Swiss-Prot
Match: CALS5_ARATH (Callose synthase 5 OS=Arabidopsis thaliana GN=CALS5 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.093e-17
Identity = 34/47 (72.34%), Postives = 40/47 (85.11%), Query Frame = 2
Query:   14 VAFLLITVSIWFMVGTWLFAPFLFNPSGFEWQKIIDDWTDWNKWISN 154
            V + L+  S WF+VG+WLFAPF FNPSGFEWQKI+DDW DWNKWIS+
Sbjct: 1655 VGYALVMGSTWFLVGSWLFAPFFFNPSGFEWQKIVDDWDDWNKWISS 1701          
BLAST of CX291158 vs. ExPASy Swiss-Prot
Match: CALS4_ARATH (Callose synthase 4 OS=Arabidopsis thaliana GN=CALS4 PE=2 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 3.181e-17
Identity = 33/41 (80.49%), Postives = 37/41 (90.24%), Query Frame = 2
Query:   26 LITVSIWFMVGTWLFAPFLFNPSGFEWQKIIDDWTDWNKWI 148
            L T+SIWFMVGTWLFAPFLFNPSGFEW +I++DW DW KWI
Sbjct: 1604 LFTISIWFMVGTWLFAPFLFNPSGFEWHEIVEDWADWKKWI 1644          
BLAST of CX291158 vs. ExPASy Swiss-Prot
Match: CALS7_ARATH (Callose synthase 7 OS=Arabidopsis thaliana GN=CALS7 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 2.062e-16
Identity = 30/45 (66.67%), Postives = 39/45 (86.67%), Query Frame = 2
Query:   20 FLLITVSIWFMVGTWLFAPFLFNPSGFEWQKIIDDWTDWNKWISN 154
            ++ IT S+WF+V +WLFAPF+FNPSGFEWQK +DDWTDW +W+ N
Sbjct: 1667 YMYITFSMWFLVTSWLFAPFIFNPSGFEWQKTVDDWTDWKRWMGN 1711          
BLAST of CX291158 vs. ExPASy Swiss-Prot
Match: CALS8_ARATH (Putative callose synthase 8 OS=Arabidopsis thaliana GN=CALS8 PE=3 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 9.578e-14
Identity = 30/47 (63.83%), Postives = 36/47 (76.60%), Query Frame = 2
Query:    8 SVVAFLLITVSIWFMVGTWLFAPFLFNPSGFEWQKIIDDWTDWNKWI 148
            S +A+  IT S+WFM  TWL APFLFNPSGF W+ I+ DW DWN+WI
Sbjct: 1711 SNMAYSFITFSVWFMSFTWLCAPFLFNPSGFTWEIIVGDWRDWNRWI 1757          
BLAST of CX291158 vs. ExPASy Swiss-Prot
Match: CALS9_ARATH (Callose synthase 9 OS=Arabidopsis thaliana GN=CALS9 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.134e-13
Identity = 25/45 (55.56%), Postives = 39/45 (86.67%), Query Frame = 2
Query:   14 VAFLLITVSIWFMVGTWLFAPFLFNPSGFEWQKIIDDWTDWNKWI 148
            V+++L+TVS WF+  +WLFAP+LFNP+GFEWQK+++D+ +W  W+
Sbjct: 1669 VSYILLTVSSWFLAVSWLFAPYLFNPAGFEWQKVVEDFKEWTNWL 1713          
BLAST of CX291158 vs. ExPASy Swiss-Prot
Match: CALSA_ARATH (Callose synthase 10 OS=Arabidopsis thaliana GN=CALS10 PE=2 SV=4)

HSP 1 Score: 73.559 bits (179), Expect = 3.640e-13
Identity = 26/44 (59.09%), Postives = 38/44 (86.36%), Query Frame = 2
Query:   17 AFLLITVSIWFMVGTWLFAPFLFNPSGFEWQKIIDDWTDWNKWI 148
            +F+L+T+S WF+V +WLFAP++FNPSGFEWQK ++D+ DW  W+
Sbjct: 1668 SFVLLTISSWFLVISWLFAPYIFNPSGFEWQKTVEDFEDWVSWL 1711          
The following BLAST results are available for this feature:
BLAST of CX291158 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
CALS3_ARATH8.643e-2387.50Callose synthase 3 OS=Arabidopsis thaliana GN=CALS... [more]
CALS2_ARATH1.630e-2187.50Callose synthase 2 OS=Arabidopsis thaliana GN=CALS... [more]
CALS1_ARATH1.630e-2187.50Callose synthase 1 OS=Arabidopsis thaliana GN=CALS... [more]
CALS6_ARATH4.908e-1873.33Putative callose synthase 6 OS=Arabidopsis thalian... [more]
CALS5_ARATH1.093e-1772.34Callose synthase 5 OS=Arabidopsis thaliana GN=CALS... [more]
CALS4_ARATH3.181e-1780.49Callose synthase 4 OS=Arabidopsis thaliana GN=CALS... [more]
CALS7_ARATH2.062e-1666.67Callose synthase 7 OS=Arabidopsis thaliana GN=CALS... [more]
CALS8_ARATH9.578e-1463.83Putative callose synthase 8 OS=Arabidopsis thalian... [more]
CALS9_ARATH2.134e-1355.56Callose synthase 9 OS=Arabidopsis thaliana GN=CALS... [more]
CALSA_ARATH3.640e-1359.09Callose synthase 10 OS=Arabidopsis thaliana GN=CAL... [more]
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Properties
Property NameValue
Genbank descriptionC03004G04SK OF2 Citrus clementina cDNA clone C03004G04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291158 ID=CX291158; Name=CX291158; organism=Citrus clementina; type=EST; length=156bp
CGGCACGAGCGTAGTTGCATTTTTGTTGATCACTGTATCAATCTGGTTCA
TGGTGGGGACTTGGTTGTTTGCTCCTTTCCTCTTCAACCCATCAGGCTTT
GAGTGGCAGAAGATTATTGATGACTGGACAGATTGGAATAAGTGGATAAG
CAACCG
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