CX291161

Overview
NameCX291161
Unique NameCX291161
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length506
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291161 vs. ExPASy Swiss-Prot
Match: SDL5A_SOYBN (Dynamin-related protein 5A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.330e-25
Identity = 32/35 (91.43%), Postives = 35/35 (100.00%), Query Frame = -2
Query:  263 LNEDPAVMEQRSALAKRLELYRSAQSEIDAVAWSK 367
            LNEDPA+ME+RSALAKRLELYRSAQ+EIDAVAWSK
Sbjct:  576 LNEDPAIMERRSALAKRLELYRSAQAEIDAVAWSK 610          

HSP 2 Score: 52.7582 bits (125), Expect = 8.330e-25
Identity = 23/30 (76.67%), Postives = 29/30 (96.67%), Query Frame = -1
Query:  366 CQVRKAKQSLLDHFFTEMGKLEQKRLSNLV 455
            CQVR+AK+SLLDHFFTE+GK+E KRLS+L+
Sbjct:  547 CQVREAKRSLLDHFFTELGKMETKRLSSLL 576          

HSP 3 Score: 34.2686 bits (77), Expect = 8.330e-25
Identity = 15/16 (93.75%), Postives = 16/16 (100.00%), Query Frame = -3
Query:  457 MVCASLRNSIPKSIVY 504
            MVCA+LRNSIPKSIVY
Sbjct:  531 MVCATLRNSIPKSIVY 546          
BLAST of CX291161 vs. ExPASy Swiss-Prot
Match: SDLCA_SOYBN (Dynamin-related protein 12A OS=Glycine max PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 5.150e-24
Identity = 32/35 (91.43%), Postives = 35/35 (100.00%), Query Frame = -2
Query:  263 LNEDPAVMEQRSALAKRLELYRSAQSEIDAVAWSK 367
            LNEDPA+ME+RSALAKRLELYRSAQ+EIDAVAWSK
Sbjct:  576 LNEDPAIMERRSALAKRLELYRSAQAEIDAVAWSK 610          

HSP 2 Score: 51.9878 bits (123), Expect = 5.150e-24
Identity = 23/30 (76.67%), Postives = 29/30 (96.67%), Query Frame = -1
Query:  366 CQVRKAKQSLLDHFFTEMGKLEQKRLSNLV 455
            CQVR+AK+SLLDHFFTE+GK+E KRLS+L+
Sbjct:  547 CQVREAKRSLLDHFFTELGKMEIKRLSSLL 576          

HSP 3 Score: 32.3426 bits (72), Expect = 5.150e-24
Identity = 14/16 (87.50%), Postives = 16/16 (100.00%), Query Frame = -3
Query:  457 MVCASLRNSIPKSIVY 504
            MVCA+LR+SIPKSIVY
Sbjct:  531 MVCATLRHSIPKSIVY 546          
BLAST of CX291161 vs. ExPASy Swiss-Prot
Match: DRP1A_ARATH (Dynamin-related protein 1A OS=Arabidopsis thaliana GN=DRP1A PE=1 SV=3)

HSP 1 Score: 65.4698 bits (158), Expect = 1.166e-22
Identity = 30/35 (85.71%), Postives = 35/35 (100.00%), Query Frame = -2
Query:  263 LNEDPAVMEQRSALAKRLELYRSAQSEIDAVAWSK 367
            LNEDPA+ME+RSA++KRLELYR+AQSEIDAVAWSK
Sbjct:  576 LNEDPAIMERRSAISKRLELYRAAQSEIDAVAWSK 610          

HSP 2 Score: 47.7506 bits (112), Expect = 1.166e-22
Identity = 20/30 (66.67%), Postives = 27/30 (90.00%), Query Frame = -1
Query:  366 CQVRKAKQSLLDHFFTEMGKLEQKRLSNLV 455
            CQVR+AK+SLLDHFF E+G ++ KRLS+L+
Sbjct:  547 CQVREAKRSLLDHFFAELGTMDMKRLSSLL 576          

HSP 3 Score: 33.8834 bits (76), Expect = 1.166e-22
Identity = 15/16 (93.75%), Postives = 15/16 (93.75%), Query Frame = -3
Query:  457 MVCASLRNSIPKSIVY 504
            MVCA LRNSIPKSIVY
Sbjct:  531 MVCAGLRNSIPKSIVY 546          
BLAST of CX291161 vs. ExPASy Swiss-Prot
Match: DRP1B_ARATH (Dynamin-related protein 1B OS=Arabidopsis thaliana GN=DRP1B PE=2 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 7.891e-19
Identity = 25/35 (71.43%), Postives = 34/35 (97.14%), Query Frame = -2
Query:  263 LNEDPAVMEQRSALAKRLELYRSAQSEIDAVAWSK 367
            L+EDPAV ++R+++AKRLELYRSAQ++I+AVAWSK
Sbjct:  576 LDEDPAVQQRRTSIAKRLELYRSAQTDIEAVAWSK 610          

HSP 2 Score: 43.1282 bits (100), Expect = 7.891e-19
Identity = 19/31 (61.29%), Postives = 26/31 (83.87%), Query Frame = -1
Query:  363 CQVRKAKQSLLDHFFTEMGKLEQKRLSNLVE 455
            CQVR+AK+SLLD FFTE+G+ E  +LS L++
Sbjct:  547 CQVREAKRSLLDIFFTELGQKEMSKLSKLLD 577          

HSP 3 Score: 33.8834 bits (76), Expect = 7.891e-19
Identity = 15/16 (93.75%), Postives = 15/16 (93.75%), Query Frame = -3
Query:  457 MVCASLRNSIPKSIVY 504
            MVCA LRNSIPKSIVY
Sbjct:  531 MVCAGLRNSIPKSIVY 546          
BLAST of CX291161 vs. ExPASy Swiss-Prot
Match: DRP1C_ARATH (Dynamin-related protein 1C OS=Arabidopsis thaliana GN=DRP1C PE=1 SV=2)

HSP 1 Score: 50.447 bits (119), Expect = 1.883e-13
Identity = 22/33 (66.67%), Postives = 28/33 (84.85%), Query Frame = -2
Query:  269 LNEDPAVMEQRSALAKRLELYRSAQSEIDAVAW 367
            L+EDP +ME+R  LAKRLELY+ A+ +IDAVAW
Sbjct:  581 LDEDPQLMERRGTLAKRLELYKQARDDIDAVAW 613          

HSP 2 Score: 35.4242 bits (80), Expect = 1.883e-13
Identity = 13/31 (41.94%), Postives = 26/31 (83.87%), Query Frame = -1
Query:  363 CQVRKAKQSLLDHFFTEMGKLEQKRLSNLVE 455
            CQVR+AK+SLL+ F+ ++G+ E+++L  +++
Sbjct:  552 CQVREAKRSLLNFFYAQVGRKEKEKLGAMLD 582          

HSP 3 Score: 29.6462 bits (65), Expect = 1.883e-13
Identity = 11/16 (68.75%), Postives = 15/16 (93.75%), Query Frame = -3
Query:  457 MVCASLRNSIPKSIVY 504
            MVC +LRNS+PK++VY
Sbjct:  536 MVCDTLRNSLPKAVVY 551          
The following BLAST results are available for this feature:
BLAST of CX291161 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
SDL5A_SOYBN8.330e-2591.43Dynamin-related protein 5A OS=Glycine max PE=2 SV=... [more]
SDLCA_SOYBN5.150e-2491.43Dynamin-related protein 12A OS=Glycine max PE=1 SV... [more]
DRP1A_ARATH1.166e-2285.71Dynamin-related protein 1A OS=Arabidopsis thaliana... [more]
DRP1B_ARATH7.891e-1971.43Dynamin-related protein 1B OS=Arabidopsis thaliana... [more]
DRP1C_ARATH1.883e-1366.67Dynamin-related protein 1C OS=Arabidopsis thaliana... [more]
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Properties
Property NameValue
Genbank descriptionC03004G07SK OF2 Citrus clementina cDNA clone C03004G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291161 ID=CX291161; Name=CX291161; organism=Citrus clementina; type=EST; length=506bp
TTTCTTTTTTTTTTTTTTGAAAGCCGAAAAATTCGTATATTATAGGCAAC
ACATAAGAGTAGCATATGAAAACAACATAACATTTAATAATATCACACAA
TAAAATATGCCTAATCACACCTTGACTACTAGTTAGGGTATAGAAATATA
ATGAAATATCCCGCCGCTTTTTCCCCTGCATGGCTAGTCATAATTGAAAG
AATGACAGTCACCATCAAGCCAAAATTCGTGAGCTGAAATGGACTGGTAA
AATGTTGAACTACTTTGACCAAGCAACTGCATCAATTTCTGATTGGGCAC
TCCTGTATAACTCCAACCTTTTTGCAAGGGCAGATCGTTGCTCCATGACT
GCCGGATCTTCATTCAACCAGGTTTGACAATCGTTTTTGCTCCAATTTAC
CCATTTCAGTGAAAAAATGATCAAGTAGGCTTTGTTTGGCCTTACGAACT
TGACAAATAAACGATGGACTTAGGAATTGAGTTCCGCAGACTTGCACAGA
CCATAT
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