CX291165

Overview
NameCX291165
Unique NameCX291165
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length556
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14112 contig Ccv1_Contig14112:62..617. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291165 vs. ExPASy Swiss-Prot
Match: USF_AQUPY (Protein usf OS=Aquifex pyrophilus GN=usf PE=4 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.483e-13
Identity = 50/157 (31.85%), Postives = 78/157 (49.68%), Query Frame = 3
Query:   99 IQIQRDDTTFDAYVVG-KEDAPGIVVVQEWWGVDFEIKNHAVKISQL-NPGFKALIPDLYRGKVGLDTAEAQHLMSG-----LDWPGAVKDIHASVNWLKA---NGSKKVGVTGYCMGGALAIASSVLVPE-VDAVVSFYGVPPPELADPTQAKAPV 536
            ++ +++      Y+   K   PG++V+ EWWG++  + N      +    GF A  PD Y GK   +  +A  LM+      +D   A+    ASV++LK       KKVGVTG+C GG L++  +   P+ +DA V FYG+P     D    K P+
Sbjct:    5 VEFEKNGVKVRGYIATPKWGGPGVIVIHEWWGLESPLSNIKEICDRFAQEGFVAFAPDFYEGKYADNPDDAGKLMTDMFENRMDKVDAI--FKASVDFLKECRYTSPKKVGVTGFCCGGTLSMYFAGKFPDLIDASVPFYGLPQITKIDAENIKVPI 159          
BLAST of CX291165 vs. ExPASy Swiss-Prot
Match: DLHH_AQUAE (Putative carboxymethylenebutenolidase OS=Aquifex aeolicus GN=aq_1997 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.813e-11
Identity = 46/155 (29.68%), Postives = 77/155 (49.68%), Query Frame = 3
Query:   99 IQIQRDDTTFDAYVVGKEDA-PGIVVVQEWWGVDFEIKNHAVKISQL-NPGFKALIPDLYRGKVGLDTAEAQHLMSGL---DWPGAVKDIHASVNWLKA---NGSKKVGVTGYCMGGALAIASSVLVPE-VDAVVSFYGVPPPELADPTQAKAPV 536
            ++ +++      Y+   + A P ++V  EWWG++  + N      +L + GF A  PD Y+G+   +  +A  LM+ +         +   ASV ++K       KKVG+TG+C GG LA+  +   PE VDA + FYG+P     +    K P+
Sbjct:    5 VEFEKNGVKVRGYIATPKWAGPAVLVFHEWWGLESPLSNIKEICDKLADEGFVAFAPDFYKGQYADNPDDAGKLMTEMFEKRMDEVDRIFQASVEFVKECRYTYPKKVGITGFCCGGTLAMYFAAKFPEMVDASLPFYGLPQLTQINAENIKVPI 159          
The following BLAST results are available for this feature:
BLAST of CX291165 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
USF_AQUPY1.483e-1331.85Protein usf OS=Aquifex pyrophilus GN=usf PE=4 SV=1[more]
DLHH_AQUAE1.813e-1129.68Putative carboxymethylenebutenolidase OS=Aquifex a... [more]
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Properties
Property NameValue
Genbank descriptionC03004G11SK OF2 Citrus clementina cDNA clone C03004G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291165 ID=CX291165; Name=CX291165; organism=Citrus clementina; type=EST; length=556bp
CGCTTCTTAAGCCCTCTCTCGCAAGGACTCACTTTCCCGCCGGTTATCGC
TTTGCAGTCAGATCAATGGCAGACTCTGCAGCTTCGCCCTTCAAGAAAAT
CCAGATTCAGAGAGATGATACTACTTTTGATGCATATGTGGTTGGCAAAG
AAGACGCCCCTGGGATTGTTGTAGTTCAGGAGTGGTGGGGTGTTGATTTT
GAGATCAAGAACCATGCTGTCAAAATCTCCCAACTAAACCCTGGATTCAA
GGCACTTATACCAGATTTATATCGGGGAAAGGTTGGTTTGGATACTGCTG
AAGCACAGCACTTGATGAGTGGTCTTGATTGGCCAGGTGCTGTCAAGGAT
ATCCACGCTTCAGTTAATTGGCTTAAGGCAAATGGTTCCAAGAAGGTTGG
CGTGACTGGATATTGCATGGGAGGTGCTCTCGCTATTGCAAGTTCTGTCT
TAGTTCCTGAGGTTGATGCTGTTGTTTCATTTTATGGGGTTCCCCCACCT
GAGCTCGCCGATCCTACCCAGGCTAAGGCACCTGTTCAAGCTCATTTTGG
GGAGCT
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