CX291166
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX291166 vs. ExPASy Swiss-Prot
Match: TC753_ARATH (Protein TOC75-3, chloroplastic OS=Arabidopsis thaliana GN=TOC75-3 PE=1 SV=1) HSP 1 Score: 304.679 bits (779), Expect = 2.351e-82 Identity = 143/160 (89.38%), Postives = 149/160 (93.12%), Query Frame = 3 Query: 3 LGIGSKFPFFNRHQLTLTRFFQLKQVEEGANKPPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRGYNMGELGAARNILELGAEIRIPVKNTHVYAFVEHGNDLGSSKDVKGNPTEVYRRMGHGSSYGVGAKLGLVRAEYAVDHNTGTGALFFRFGERY 482 LGIGSKFPFFNRHQLT+T+F QL++VE+GA K PPPVLVLHGHYGGCVGDLPSYDAF LGGPYSVRGYNMGELGAARNI E+GAEIRIPVKNTHVYAFVEHGNDLGSSKDVKGNPT VYRR G GSSYG G KLGLVRAEYAVDHN GTGALFFRFGERY Sbjct: 659 LGIGSKFPFFNRHQLTMTKFIQLREVEQGAGKSPPPVLVLHGHYGGCVGDLPSYDAFVLGGPYSVRGYNMGELGAARNIAEVGAEIRIPVKNTHVYAFVEHGNDLGSSKDVKGNPTAVYRRTGQGSSYGAGVKLGLVRAEYAVDHNNGTGALFFRFGERY 818
BLAST of CX291166 vs. ExPASy Swiss-Prot
Match: TOC75_PEA (Protein TOC75, chloroplastic OS=Pisum sativum GN=TOC75 PE=1 SV=1) HSP 1 Score: 295.819 bits (756), Expect = 1.092e-79 Identity = 138/160 (86.25%), Postives = 146/160 (91.25%), Query Frame = 3 Query: 3 LGIGSKFPFFNRHQLTLTRFFQLKQVEEGANKPPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRGYNMGELGAARNILELGAEIRIPVKNTHVYAFVEHGNDLGSSKDVKGNPTEVYRRMGHGSSYGVGAKLGLVRAEYAVDHNTGTGALFFRFGERY 482 LG+GS FPFFNRHQLT+T+F QL VEEGA K PPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRGYNMGE+GAARNILEL AEIRIP+K THVYAF EHG DLGSSKDVKGNPT VYRRMG GSSYG G KLGLVRAEYAVDHN+GTGA+FFRFGER+ Sbjct: 650 LGVGSNFPFFNRHQLTVTKFLQLMSVEEGAGKSPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRGYNMGEIGAARNILELAAEIRIPIKGTHVYAFAEHGTDLGSSKDVKGNPTVVYRRMGQGSSYGAGMKLGLVRAEYAVDHNSGTGAVFFRFGERF 809
BLAST of CX291166 vs. ExPASy Swiss-Prot
Match: TC754_ARATH (Protein TOC75-4, chloroplastic OS=Arabidopsis thaliana GN=TOC75-4 PE=2 SV=1) HSP 1 Score: 285.034 bits (728), Expect = 1.928e-76 Identity = 133/160 (83.12%), Postives = 144/160 (90.00%), Query Frame = 3 Query: 3 LGIGSKFPFFNRHQLTLTRFFQLKQVEEGANKPPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRGYNMGELGAARNILELGAEIRIPVKNTHVYAFVEHGNDLGSSKDVKGNPTEVYRRMGHGSSYGVGAKLGLVRAEYAVDHNTGTGALFFRFGERY 482 LGIG+ FP FNRHQL+LT F QLKQVEEG++KP PPVLVLHG YGGC+GDLPSYD F LGGP SVRGY+MGELGAA+NILELGAEIRIPVKNTHVYAF EHGNDLGSSKDVKGNPT +YR+MGHGSSYG+G KLG+VRAEY V HN GTGALF RFGERY Sbjct: 237 LGIGNNFPLFNRHQLSLTSFIQLKQVEEGSDKPQPPVLVLHGRYGGCIGDLPSYDVFALGGPNSVRGYSMGELGAAKNILELGAEIRIPVKNTHVYAFAEHGNDLGSSKDVKGNPTGLYRKMGHGSSYGLGVKLGMVRAEYTVRHNRGTGALFLRFGERY 396
BLAST of CX291166 vs. ExPASy Swiss-Prot
Match: TOC75_ORYSJ (Protein TOC75, chloroplastic OS=Oryza sativa subsp. japonica GN=TOC75 PE=2 SV=2) HSP 1 Score: 273.478 bits (698), Expect = 5.804e-73 Identity = 126/160 (78.75%), Postives = 141/160 (88.12%), Query Frame = 3 Query: 3 LGIGSKFPFFNRHQLTLTRFFQLKQVEEGANKPPPPVLVLHGHYGGCVGDLPSYDAFTLGGPYSVRGYNMGELGAARNILELGAEIRIPVKNTHVYAFVEHGNDLGSSKDVKGNPTEVYRRMGHGSSYGVGAKLGLVRAEYAVDHNTGTGALFFRFGERY 482 LGIGSK PFFNRHQLTLT+F L + E+GA KP P VLVLHGHY GCVGDLPSYDAFTLGGPYSVRGY MGELGA+RN+LE+ +E+RIPV+NT+VY FVEHG DLGSSKDVKGNPTE +RR+GHGSSYG+G KLGLVR EY VDHN GTG +FFRFGER+ Sbjct: 658 LGIGSKNPFFNRHQLTLTKFVNLNKQEKGAGKPLPAVLVLHGHYAGCVGDLPSYDAFTLGGPYSVRGYGMGELGASRNVLEVASELRIPVRNTYVYGFVEHGTDLGSSKDVKGNPTEFFRRVGHGSSYGLGVKLGLVRGEYIVDHNAGTGTVFFRFGERF 817
BLAST of CX291166 vs. ExPASy Swiss-Prot
Match: OEP80_ARATH (Outer envelope protein of 80 kDa OS=Arabidopsis thaliana GN=OEP80 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.837e-11 Identity = 42/119 (35.29%), Postives = 60/119 (50.42%), Query Frame = 3 Query: 135 GGCVGDLPSYDAFTLGGPYSVRGYNMGELGAARNILELGAEIRIPVKN-THVYAFVEHGNDLGSSKDVKGNPTEVYRRMGHGSSYGVGAK----LGLVRAEYAV-DHNTGTGALFFRFG 473 G VG ++AF +GG SVRGY G +G+ R+ + E+ PV+ F ++G D+GS V G+P + G G YG+G + LG +R EYA D + G F FG Sbjct: 613 GHVVGKFSPHEAFVIGGTNSVRGYEEGAVGSGRSYVVGSGELSFPVRGPVEGVIFTDYGTDMGSGSTVPGDPAGARLKPGSGYGYGLGVRVDSPLGPLRLEYAFNDQHAGR----FHFG 727 The following BLAST results are available for this feature:
BLAST of CX291166 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX291166 ID=CX291166; Name=CX291166; organism=Citrus clementina; type=EST; length=602bpback to top |