CX291167

Overview
NameCX291167
Unique NameCX291167
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length629
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291167 vs. ExPASy Swiss-Prot
Match: DRL29_ARATH (Probable disease resistance protein At4g33300 OS=Arabidopsis thaliana GN=At4g33300 PE=2 SV=2)

HSP 1 Score: 260.381 bits (664), Expect = 5.518e-69
Identity = 126/209 (60.29%), Postives = 163/209 (77.99%), Query Frame = 3
Query:    3 EIHDLDEEEAFAILVELSDRNLLKIVKDARAGDMYSSYYEISVTQHDVLRDLALHLSNQENINDRKRLLMPRRDTELPKEWERNVDQPFNAQIVSIHTGDMREMDWFRMEFPKAEVLILNFSSTEEYFLPPFIENMEKLRALIVINYSTSNAALGNFSVCSNLTNLRSLWLEKVSISQLPKSSIPLKKMQKISFVLCKINNSLDQSVVD 629
            E+HD+DE  AFAILV+LS +NLL + KD R G +Y+S+Y+I VTQHDVLRDLALHLSN   +N RKRLLMP+R+ +LP +WERN D+ + AQIVSIHTG+M EM WF MEFPKAE+LILNFSS ++Y LPPFI  M +L+ L++IN   S A L +FS+ ++L+ LRSLWLE+V + QL  S+ PLK + K+S +LCKIN S DQ+ +D
Sbjct:  459 ELHDIDEGNAFAILVDLSHKNLLTLGKDPRLGSLYASHYDIFVTQHDVLRDLALHLSNAGKVNRRKRLLMPKRELDLPGDWERNNDEHYIAQIVSIHTGEMNEMQWFDMEFPKAEILILNFSS-DKYVLPPFISKMSRLKVLVIINNGMSPAVLHDFSIFAHLSKLRSLWLERVHVPQLSNSTTPLKNLHKMSLILCKINKSFDQTGLD 666          
BLAST of CX291167 vs. ExPASy Swiss-Prot
Match: DRL30_ARATH (Probable disease resistance protein At5g04720 OS=Arabidopsis thaliana GN=At5g04720 PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.229e-68
Identity = 121/209 (57.89%), Postives = 167/209 (79.90%), Query Frame = 3
Query:    3 EIHDLDEEEAFAILVELSDRNLLKIVKDARAGDMYSSYYEISVTQHDVLRDLALHLSNQENINDRKRLLMPRRDTELPKEWERNVDQPFNAQIVSIHTGDMREMDWFRMEFPKAEVLILNFSSTEEYFLPPFIENMEKLRALIVINYSTSNAALGNFSVCSNLTNLRSLWLEKVSISQLPKSSIPLKKMQKISFVLCKINNSLDQSVVD 629
            E+HDL++  AFA++V+L++RNLL +VKD R G MY+SYY+I VTQHDVLRD+AL LSN   +N+R+RLLMP+R++ LP+EWERN D+P+ A++VSIHTG+M +MDWF ME PKAEVLIL+FSS ++Y LPPFI  M KL AL++IN   S A L +FS+ +NL  L+SLWL++V + +L  S++PL+ + K+S + CKIN SLDQ+ +D
Sbjct:  438 ELHDLEDATAFAVIVDLANRNLLTLVKDPRFGHMYTSYYDIFVTQHDVLRDVALRLSNHGKVNNRERLLMPKRESMLPREWERNNDEPYKARVVSIHTGEMTQMDWFDMELPKAEVLILHFSS-DKYVLPPFIAKMGKLTALVIINNGMSPARLHDFSIFTNLAKLKSLWLQRVHVPELSSSTVPLQNLHKLSLIFCKINTSLDQTELD 645          
BLAST of CX291167 vs. ExPASy Swiss-Prot
Match: DRL39_ARATH (Putative disease resistance protein At5g47280 OS=Arabidopsis thaliana GN=At5g47280 PE=2 SV=1)

HSP 1 Score: 252.292 bits (643), Expect = 1.503e-66
Identity = 121/209 (57.89%), Postives = 162/209 (77.51%), Query Frame = 3
Query:    3 EIHDLDEEEAFAILVELSDRNLLKIVKDARAGDMYSSYYEISVTQHDVLRDLALHLSNQENINDRKRLLMPRRDTELPKEWERNVDQPFNAQIVSIHTGDMREMDWFRMEFPKAEVLILNFSSTEEYFLPPFIENMEKLRALIVINYSTSNAALGNFSVCSNLTNLRSLWLEKVSISQLPKSSIPLKKMQKISFVLCKINNSLDQSVVD 629
            +IHDL++  AF +LV+L++RNLL +VKD     M +SYY+I VTQHDVLRD+ALHL+N+  ++ R RLLMP+R+T LP EWER+ D+P+NA++VSIHTG+M EMDWF M+FPKAEVLI+NFSS + Y LPPFI  M  LR  ++IN  TS A L +F + ++LTNLRSLWLE+V + +L  S IPLK + K+  ++CKINNS DQ+ +D
Sbjct:  250 KIHDLEDAAAFDVLVDLANRNLLTLVKDPTFVAMGTSYYDIFVTQHDVLRDVALHLTNRGKVSRRDRLLMPKRETMLPSEWERSNDEPYNARVVSIHTGEMTEMDWFDMDFPKAEVLIVNFSS-DNYVLPPFIAKMGMLRVFVIINNGTSPAHLHDFPIPTSLTNLRSLWLERVHVPELSSSMIPLKNLHKLYLIICKINNSFDQTAID 457          
BLAST of CX291167 vs. ExPASy Swiss-Prot
Match: ADR1_ARATH (Disease resistance protein ADR1 OS=Arabidopsis thaliana GN=ADR1 PE=2 SV=2)

HSP 1 Score: 243.432 bits (620), Expect = 6.981e-64
Identity = 115/209 (55.02%), Postives = 157/209 (75.12%), Query Frame = 3
Query:    3 EIHDLDEEEAFAILVELSDRNLLKIVKDARAGDMYSSYYEISVTQHDVLRDLALHLSNQENINDRKRLLMPRRDTELPKEWERNVDQPFNAQIVSIHTGDMREMDWFRMEFPKAEVLILNFSSTEEYFLPPFIENMEKLRALIVINYSTSNAALGNFSVCSNLTNLRSLWLEKVSISQLPKSSIPLKKMQKISFVLCKINNSLDQSVVD 629
            E HD+DEE AF+ ++ L+D+NLL IV + R GD++  YY++ VTQHDVLRDLALH+SN+ ++N R+RLLMP+ +  LP+EWE+N D+PF+A+IVS+HTG+M EM+WF M+ PKAEVLILNFSS + Y LPPFI  M +LR L++IN   S A L  FS+ +NL  LRSLWL++V + +L   +IPLK + KI  + CK+ NS  Q+  D
Sbjct:  415 ERHDIDEETAFSFVLRLADKNLLTIVNNPRFGDVHIGYYDVFVTQHDVLRDLALHMSNRVDVNRRERLLMPKTEPVLPREWEKNKDEPFDAKIVSLHTGEMDEMNWFDMDLPKAEVLILNFSS-DNYVLPPFIGKMSRLRVLVIINNGMSPARLHGFSIFANLAKLRSLWLKRVHVPELTSCTIPLKNLHKIHLIFCKVKNSFVQTSFD 622          
BLAST of CX291167 vs. ExPASy Swiss-Prot
Match: DRL43_ARATH (Probable disease resistance protein At5g66910 OS=Arabidopsis thaliana GN=At5g66910 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 9.523e-29
Identity = 73/184 (39.67%), Postives = 108/184 (58.70%), Query Frame = 3
Query:   42 LVELSDRNLLKIVKDARAGDMYSSYYEISVTQHDVLRDLALHLSNQENINDRKRLLMPRRDTELPKEWERNVDQPFNAQIVSIHTGDMREMDWFRMEFPKAEVLILNFSSTEEYFLPPFIENMEKLRALIVINYSTSNAALGNFSVCSNLTNLRSLWLEKVSISQLPKSSIPLKKMQKISFVLC 593
            L EL+ +NLLK+V           Y E+ VTQH++LR+LA+  S  E I  RK+L +  R+   P E    ++QP NA+++SI+T D+    W  M+ P  E L+LN SS + Y LP FI  M+KL+ L + N+    A L NFS  S+L NL+ +  EKVS++ L    + L  ++K+SF +C
Sbjct:  457 LNELASQNLLKLVHLGTNKREDGFYNELLVTQHNILRELAIFQSELEPIMQRKKLNLEIREDNFPDEC---LNQPINARLLSIYTDDLFSSKWLEMDCPNVEALVLNISSLD-YALPSFIAEMKKLKVLTIANHGFYPARLSNFSCLSSLPNLKRIRFEKVSVTLLDIPQLQLGSLKKLSFFMC 636          
BLAST of CX291167 vs. ExPASy Swiss-Prot
Match: DRL41_ARATH (Probable disease resistance protein At5g66890 OS=Arabidopsis thaliana GN=At5g66890 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.520e-26
Identity = 76/202 (37.62%), Postives = 113/202 (55.94%), Query Frame = 3
Query:   24 EEAFAILVELSDRNLLKIVKDARAGDMYSSYYEISVTQHDVLRDLALH--LSNQENINDRKRLLMPRRDTELPKEWERNVDQPF--NAQIVSIHTGDMREMDWFRMEFPKAEVLILNFSSTEEYFLPPFIENMEKLRALIVINYSTSNAALGNFSVCSNLTNLRSLWLEKVSISQLPKSSIPLKKMQKISFVLCKINNSLDQ 617
            +E    L +L+ RNLLK++   R       Y E+ V Q +VLR+ A++  L    +I +RKRL +  +D + P  W  N  QP   NA + SI T D     WF M+ P  E L+LN SS+  Y LP FI  M++L+ +I+IN+    A L N S  S+L NL+ +  EKVSIS L    + LK ++K+S   C + ++L++
Sbjct:   47 KEGMNNLQDLASRNLLKLLPIGRNEYEDGFYNELLVKQDNVLREFAINQCLKESSSIFERKRLNLEIQDNKFPN-WCLNPKQPIVINASLFSISTDDSFASSWFEMDCPNVEALVLNISSSN-YALPNFIATMKELKVVIIINHGLEPAKLTNLSCLSSLPNLKRIRFEKVSISLLDIPKLGLKSLEKLSLWFCHVVDALNE 246          
BLAST of CX291167 vs. ExPASy Swiss-Prot
Match: DRL42_ARATH (Probable disease resistance protein At5g66900 OS=Arabidopsis thaliana GN=At5g66900 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 5.777e-26
Identity = 72/197 (36.55%), Postives = 108/197 (54.82%), Query Frame = 3
Query:    3 EIHDLDEEEAFAILVELSDRNLLKIVKDARAGDMYSSYYEISVTQHDVLRDLALHLSNQENINDRKRLLMPRRDTELPKEWERNVDQPFNAQIVSIHTGDMREMDWFRMEFPKAEVLILNFSSTEEYFLPPFIENMEKLRALIVINYSTSNAALGNFSVCSNLTNLRSLWLEKVSISQLPKSSIPLKKMQKISFVLC 593
            E++       +  L +L+ +NLLK+V           Y +  VTQHD+LR+LA+  S  +   +RKRL +   +   P +W  N     NA ++SI T D+    W  M+ P  E L+LN SS++ Y LP FI  M+KL+ L + N+    A L NFS  S+L NL+ + LEKVSI+ L    + L  ++K+S V+C
Sbjct:  439 ELYGKGSSILYMYLEDLASQNLLKLVPLGTNEHEDGFYNDFLVTQHDILRELAICQSEFKENLERKRLNLEILENTFP-DWCLNT---INASLLSISTDDLFSSKWLEMDCPNVEALVLNLSSSD-YALPSFISGMKKLKVLTITNHGFYPARLSNFSCLSSLPNLKRIRLEKVSITLLDIPQLQLSSLKKLSLVMC 630          
The following BLAST results are available for this feature:
BLAST of CX291167 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
DRL29_ARATH5.518e-6960.29Probable disease resistance protein At4g33300 OS=A... [more]
DRL30_ARATH1.229e-6857.89Probable disease resistance protein At5g04720 OS=A... [more]
DRL39_ARATH1.503e-6657.89Putative disease resistance protein At5g47280 OS=A... [more]
ADR1_ARATH6.981e-6455.02Disease resistance protein ADR1 OS=Arabidopsis tha... [more]
DRL43_ARATH9.523e-2939.67Probable disease resistance protein At5g66910 OS=A... [more]
DRL41_ARATH1.520e-2637.62Probable disease resistance protein At5g66890 OS=A... [more]
DRL42_ARATH5.777e-2636.55Probable disease resistance protein At5g66900 OS=A... [more]
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Properties
Property NameValue
Genbank descriptionC03004H02SK OF2 Citrus clementina cDNA clone C03004H02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291167 ID=CX291167; Name=CX291167; organism=Citrus clementina; type=EST; length=629bp
TTGAGATCCATGACCTTGATGAGGAAGAGGCTTTTGCCATCCTTGTTGAG
CTTTCAGATAGAAACCTTTTGAAGATTGTGAAAGATGCACGAGCTGGAGA
CATGTATAGCAGTTATTATGAGATATCTGTCACTCAACATGATGTGTTGA
GAGACCTTGCTCTCCACCTGAGCAACCAAGAGAACATCAATGATCGCAAG
CGATTGCTTATGCCAAGAAGAGACACTGAACTACCTAAAGAATGGGAGCG
GAATGTAGATCAGCCATTCAATGCTCAAATTGTTTCCATTCATACAGGTG
ATATGAGGGAAATGGACTGGTTCCGCATGGAATTCCCAAAGGCTGAAGTG
CTAATCCTGAATTTCTCTTCTACGGAGGAGTACTTCTTGCCTCCCTTCAT
CGAGAACATGGAAAAACTCAGGGCACTCATTGTAATAAACTATAGTACTT
CAAATGCAGCCCTTGGCAACTTTTCAGTCTGTTCAAATTTAACCAACTTG
AGAAGCCTCTGGCTTGAAAAGGTCTCCATTTCTCAATTACCAAAATCTTC
AATCCCCTTGAAAAAAATGCAGAAGATCTCTTTTGTTCTCTGCAAGATTA
ACAACAGCCTAGATCAATCAGTAGTTGAC
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