CX291177

Overview
NameCX291177
Unique NameCX291177
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length363
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX291177 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.787e-11
Identity = 36/84 (42.86%), Postives = 44/84 (52.38%), Query Frame = 2 
Query:  116 CCTCQVEESYPSHENERLKSPKNYPDG----HHKKVPAPVKPEVQKAAPPIEVPALPLDELKEKTDNFGSKALIGEGSYGRVYY 355
            CC    +    +    R    K++P G    HH+      K        PIEVP +P  ELKE TD+FGS +LIGEGSYGRVYY
Sbjct:    6 CCGEDDDMHKTADYGGRHNQAKHFPPGNDARHHQASETAQKGPPVVKLQPIEVPIIPFSELKEATDDFGSNSLIGEGSYGRVYY 89
The following BLAST results are available for this feature:
BLAST of CX291177 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y2706_ARATH9.787e-1142.86Probable receptor-like protein kinase At2g47060 OS... [more]
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Properties
Property NameValue
Genbank descriptionC03004H12SK OF2 Citrus clementina cDNA clone C03004H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291177 ID=CX291177; Name=CX291177; organism=Citrus clementina; type=EST; length=363bp
CGGCACGTGGAGTAATCAGGCACATGCACCTTCTCCAGGTTACTTTGTAC
GATTGGATAAAGGTCCAGAAGACGATCTCTATTTGAAGAAGAGAGTAAAG
ATGCGTCGCTGGCTCTGTTGTACTTGTCAAGTAGAGGAGTCTTATCCATC
TCATGAAAATGAGCGCCTGAAAAGCCCAAAGAATTATCCAGATGGGCACC
ACAAAAAGGTCCCAGCTCCGGTGAAACCTGAAGTGCAGAAGGCAGCACCA
CCTATTGAAGTGCCTGCATTGCCTTTGGATGAACTGAAAGAAAAGACGGA
CAATTTTGGATCAAAGGCATTGATTGGTGAGGGATCGTATGGAAGGGTGT
ATTATGCAAACTT
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