CX291192

Overview
NameCX291192
Unique NameCX291192
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length382
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig12998 contig Ccv1_Contig12998:917..1298. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291192 vs. ExPASy Swiss-Prot
Match: DNJH2_ALLPO (DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 1.409e-57
Identity = 101/123 (82.11%), Postives = 115/123 (93.50%), Query Frame = 3
Query:    3 EDLFYEHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDSLTPDQVKALEAILPSRPLSGMTDMELDECEETTLHDVNIEEEMRRKQ 371
            +DLFYEH+LSLTEALCGFQF LTHLD RQLLIKSNPGEV+KPD +K IN+EGMP+YQRPFM+GKLYIHF+V+FPDSLTPDQ KALE++LPSR  S +TDME+DECEETT+HDVNIEEEMRRKQ
Sbjct:  270 DDLFYEHSLSLTEALCGFQFVLTHLDNRQLLIKSNPGEVIKPDQFKGINDEGMPMYQRPFMRGKLYIHFSVDFPDSLTPDQCKALESVLPSRNASRLTDMEIDECEETTMHDVNIEEEMRRKQ 392          
BLAST of CX291192 vs. ExPASy Swiss-Prot
Match: DNJH_ATRNU (DnaJ protein homolog ANJ1 OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 5.354e-57
Identity = 104/126 (82.54%), Postives = 114/126 (90.48%), Query Frame = 3
Query:    3 EDLFYEHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDSLTPDQVKALEAILPSRPLSGMTDMELDECEETTLHDVNIEEEMRRKQAHA 380
            EDLFYEHTLSLTEALCGF+F LTHLDGRQLLIKSN GEVVKPD +KAI +EGMP+YQRPFMKGK+YIHFTVEFPDSL PDQVK+LEAILP +P   +T MELDECEETTLH+VNIEEEM+RKQ  A
Sbjct:  270 EDLFYEHTLSLTEALCGFRFVLTHLDGRQLLIKSNLGEVVKPDQFKAIEDEGMPIYQRPFMKGKMYIHFTVEFPDSLNPDQVKSLEAILPPKPSMSLTYMELDECEETTLHNVNIEEEMKRKQTQA 395          
BLAST of CX291192 vs. ExPASy Swiss-Prot
Match: DNAJ3_ARATH (Chaperone protein dnaJ 3 OS=Arabidopsis thaliana GN=ATJ3 PE=1 SV=2)

HSP 1 Score: 219.164 bits (557), Expect = 5.354e-57
Identity = 103/122 (84.43%), Postives = 113/122 (92.62%), Query Frame = 3
Query:    3 EDLFYEHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDSLTPDQVKALEAILPSRPLSGMTDMELDECEETTLHDVNIEEEMRRK 368
            EDLF EHTLSLTEALCGFQF LTHLDGR LLIKSNPGEVVKPDSYKAI++EGMP+YQRPFMKGKLYIHFTVEFPDSL+PDQ KALEA+LP    + ++DME+DECEETTLHDVNIE+EMRRK
Sbjct:  270 EDLFVEHTLSLTEALCGFQFVLTHLDGRSLLIKSNPGEVVKPDSYKAISDEGMPIYQRPFMKGKLYIHFTVEFPDSLSPDQTKALEAVLPKPSTAQLSDMEIDECEETTLHDVNIEDEMRRK 391          
BLAST of CX291192 vs. ExPASy Swiss-Prot
Match: DNJH1_ALLPO (DnaJ protein homolog 1 (Fragment) OS=Allium porrum GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 1.010e-55
Identity = 99/123 (80.49%), Postives = 112/123 (91.06%), Query Frame = 3
Query:    3 EDLFYEHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDSLTPDQVKALEAILPSRPLSGMTDMELDECEETTLHDVNIEEEMRRKQ 371
            +DLFY+HTLSLTEALCGFQF LTHLDGRQLLIKSNPGEVVKPD +KAIN+EGMP+YQRPFM+GKLYI F V+FPDSLTPDQ K +E++LP    S +TDME+DECEETT+HDVNIEEEMRRKQ
Sbjct:  249 DDLFYKHTLSLTEALCGFQFVLTHLDGRQLLIKSNPGEVVKPDQFKAINDEGMPMYQRPFMRGKLYIQFLVDFPDSLTPDQCKVIESVLPRSASSQLTDMEIDECEETTMHDVNIEEEMRRKQ 371          
BLAST of CX291192 vs. ExPASy Swiss-Prot
Match: DNJH_CUCSA (DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 PE=2 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 5.011e-55
Identity = 101/124 (81.45%), Postives = 111/124 (89.52%), Query Frame = 3
Query:    3 EDLFYEHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDSLTPDQVKALEAILPSRPLSGMTDMELDECEETTLHDVNIEEEMRRKQA 374
            +DLF EHTLSL E+LCGFQF LTHLDGRQLLIKS PGEVVKPD +KAIN+EGMP+YQRPFMKGKLYIHF+VEFPDSL P+Q KALE +LP R    ++DMELDECEETTLHDVNIEEEMRRKQA
Sbjct:  268 DDLFVEHTLSLVESLCGFQFILTHLDGRQLLIKSLPGEVVKPDQFKAINDEGMPMYQRPFMKGKLYIHFSVEFPDSLNPEQCKALEGVLPPRTSVQLSDMELDECEETTLHDVNIEEEMRRKQA 391          
BLAST of CX291192 vs. ExPASy Swiss-Prot
Match: DNAJ2_ARATH (Chaperone protein dnaJ 2 OS=Arabidopsis thaliana GN=ATJ2 PE=1 SV=2)

HSP 1 Score: 210.305 bits (534), Expect = 2.487e-54
Identity = 97/122 (79.51%), Postives = 112/122 (91.80%), Query Frame = 3
Query:    3 EDLFYEHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDSLTPDQVKALEAILPSRPLSGMTDMELDECEETTLHDVNIEEEMRRK 368
            EDLF EHT+SLTEALCGFQF LTHLD RQLLIKS PGEVVKPDSYKAI++EGMP+YQRPFMKGKLYIHFTVEFP+SL+PDQ KA+EA+LP    + ++DME+D+CEETTLHDVNIE+EM+RK
Sbjct:  271 EDLFVEHTISLTEALCGFQFVLTHLDKRQLLIKSKPGEVVKPDSYKAISDEGMPIYQRPFMKGKLYIHFTVEFPESLSPDQTKAIEAVLPKPTKAAISDMEIDDCEETTLHDVNIEDEMKRK 392          
BLAST of CX291192 vs. ExPASy Swiss-Prot
Match: DNJA2_BOVIN (DnaJ homolog subfamily A member 2 OS=Bos taurus GN=DNAJA2 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 6.605e-23
Identity = 51/114 (44.74%), Postives = 73/114 (64.04%), Query Frame = 3
Query:    6 DLFYEHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDS--LTPDQVKALEAILPSRP-----LSGMTDMELDECEET 326
            DL   + + L EALCGFQF   HLDGRQ+++K  PG+V++P   + +  EGMP Y+ PF KG LYI F V+FP++  + PD++  LE +LPSRP     +    ++EL E + T
Sbjct:  266 DLHMTYKIGLVEALCGFQFTFKHLDGRQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLLPSRPEVPNIIGDTEEVELQEFDST 379          
BLAST of CX291192 vs. ExPASy Swiss-Prot
Match: DNJA2_HUMAN (DnaJ homolog subfamily A member 2 OS=Homo sapiens GN=DNAJA2 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.627e-23
Identity = 51/114 (44.74%), Postives = 73/114 (64.04%), Query Frame = 3
Query:    6 DLFYEHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDS--LTPDQVKALEAILPSRP-----LSGMTDMELDECEET 326
            DL   + + L EALCGFQF   HLDGRQ+++K  PG+V++P   + +  EGMP Y+ PF KG LYI F V+FP++  + PD++  LE +LPSRP     +    ++EL E + T
Sbjct:  266 DLHMTYKIGLVEALCGFQFTFKHLDGRQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLLPSRPEVPNIIGETEEVELQEFDST 379          
BLAST of CX291192 vs. ExPASy Swiss-Prot
Match: DNJA2_RAT (DnaJ homolog subfamily A member 2 OS=Rattus norvegicus GN=Dnaja2 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 4.281e-22
Identity = 50/114 (43.86%), Postives = 72/114 (63.16%), Query Frame = 3
Query:    6 DLFYEHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDS--LTPDQVKALEAILPSRP-----LSGMTDMELDECEET 326
            DL   + + L EALCGFQF   HLD RQ+++K  PG+V++P   + +  EGMP Y+ PF KG LYI F V+FP++  + PD++  LE +LPSRP     +    ++EL E + T
Sbjct:  266 DLHMTYKIGLVEALCGFQFTFKHLDARQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLLPSRPEVPNVIGETEEVELQEFDST 379          
BLAST of CX291192 vs. ExPASy Swiss-Prot
Match: DNJA2_MOUSE (DnaJ homolog subfamily A member 2 OS=Mus musculus GN=Dnaja2 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 4.281e-22
Identity = 50/114 (43.86%), Postives = 72/114 (63.16%), Query Frame = 3
Query:    6 DLFYEHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEVVKPDSYKAINEEGMPLYQRPFMKGKLYIHFTVEFPDS--LTPDQVKALEAILPSRP-----LSGMTDMELDECEET 326
            DL   + + L EALCGFQF   HLD RQ+++K  PG+V++P   + +  EGMP Y+ PF KG LYI F V+FP++  + PD++  LE +LPSRP     +    ++EL E + T
Sbjct:  266 DLHMTYKIGLVEALCGFQFTFKHLDARQIVVKYPPGKVIEPGCVRVVRGEGMPQYRNPFEKGDLYIKFDVQFPENNWINPDKLSELEDLLPSRPEVPNVIGETEEVELQEFDST 379          
The following BLAST results are available for this feature:
BLAST of CX291192 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
DNJH2_ALLPO1.409e-5782.11DnaJ protein homolog 2 OS=Allium porrum GN=LDJ2 PE... [more]
DNJH_ATRNU5.354e-5782.54DnaJ protein homolog ANJ1 OS=Atriplex nummularia P... [more]
DNAJ3_ARATH5.354e-5784.43Chaperone protein dnaJ 3 OS=Arabidopsis thaliana G... [more]
DNJH1_ALLPO1.010e-5580.49DnaJ protein homolog 1 (Fragment) OS=Allium porrum... [more]
DNJH_CUCSA5.011e-5581.45DnaJ protein homolog OS=Cucumis sativus GN=DNAJ1 P... [more]
DNAJ2_ARATH2.487e-5479.51Chaperone protein dnaJ 2 OS=Arabidopsis thaliana G... [more]
DNJA2_BOVIN6.605e-2344.74DnaJ homolog subfamily A member 2 OS=Bos taurus GN... [more]
DNJA2_HUMAN8.627e-2344.74DnaJ homolog subfamily A member 2 OS=Homo sapiens ... [more]
DNJA2_RAT4.281e-2243.86DnaJ homolog subfamily A member 2 OS=Rattus norveg... [more]
DNJA2_MOUSE4.281e-2243.86DnaJ homolog subfamily A member 2 OS=Mus musculus ... [more]

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Properties
Property NameValue
Genbank descriptionC03005B06SK OF2 Citrus clementina cDNA clone C03005B06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291192 ID=CX291192; Name=CX291192; organism=Citrus clementina; type=EST; length=382bp
GAGAAGATCTCTTTTATGAGCATACTTTGTCGCTAACTGAGGCCCTCTGC
GGTTTCCAGTTTGCACTGACTCATCTGGATGGGAGGCAACTTCTGATTAA
ATCGAATCCTGGGGAAGTTGTTAAGCCTGATTCATACAAGGCTATCAATG
AGGAGGGTATGCCCTTGTACCAGAGGCCGTTCATGAAGGGGAAACTGTAC
ATTCACTTCACAGTCGAATTCCCTGATTCTCTGACCCCAGATCAGGTTAA
GGCCCTAGAGGCCATCCTCCCATCGAGGCCATTGTCTGGGATGACTGACA
TGGAGCTAGATGAATGTGAAGAGACTACATTGCATGATGTCAACATTGAG
GAGGAGATGCGGAGGAAGCAGGCTCATGCTCA
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