CX291203

Overview
NameCX291203
Unique NameCX291203
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length310
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9492 contig Ccv1_Contig9492:274..583. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291203 vs. ExPASy Swiss-Prot
Match: PER42_ARATH (Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2)

HSP 1 Score: 177.178 bits (448), Expect = 2.291e-44
Identity = 82/103 (79.61%), Postives = 94/103 (91.26%), Query Frame = 1
Query:    1 HDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSM 309
            HDCAV+SCDASLLLDSTR+ L EKE DRSFG+RNFRYIE IKEA+ERECPGVVSC+DILVLS R+G+ A+GGPYIPLKTGRRDG KSR ++LE YLPDHN+S+
Sbjct:   71 HDCAVESCDASLLLDSTRRELGEKEHDRSFGLRNFRYIEEIKEALERECPGVVSCSDILVLSAREGIEAVGGPYIPLKTGRRDGLKSRTDMLESYLPDHNESI 173          
BLAST of CX291203 vs. ExPASy Swiss-Prot
Match: PER21_ARATH (Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 4.637e-29
Identity = 61/104 (58.65%), Postives = 79/104 (75.96%), Query Frame = 1
Query:    1 HDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIP-LKTGRRDGRKSRAEILEQYLPDHNDSM 309
            HDC V+SCDASLLL++ R   SE++  RSFGMRNF+Y++ IK+A+E+ECP  VSCADI+ LS RDG+V L GP I  +KTGRRD R S    +E  +P+HNDS+
Sbjct:   70 HDCVVKSCDASLLLETARGVESEQKSKRSFGMRNFKYVKIIKDALEKECPSTVSCADIVALSARDGIVMLKGPKIEMIKTGRRDSRGSYLGDVETLIPNHNDSL 173          
BLAST of CX291203 vs. ExPASy Swiss-Prot
Match: PER47_ARATH (Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 6.071e-21
Identity = 42/90 (46.67%), Postives = 61/90 (67.78%), Query Frame = 1
Query:    1 HDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAE 270
            HDC ++ CDAS+LLDST+   +EK+   +  +R +  I++ KE +E  CPGVVSCADI+ ++ RD V   GGPY  +  GR DG++S+ E
Sbjct:   66 HDCFIEGCDASILLDSTKDNTAEKDSPANLSLRGYEIIDDAKEKIENRCPGVVSCADIVAMAARDAVFWAGGPYYDIPKGRFDGKRSKIE 155          
BLAST of CX291203 vs. ExPASy Swiss-Prot
Match: PER48_ARATH (Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3)

HSP 1 Score: 98.2117 bits (243), Expect = 1.352e-20
Identity = 43/97 (44.33%), Postives = 63/97 (64.95%), Query Frame = 1
Query:    1 HDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLP 291
            HDC ++ CDAS+LLD+     SEK+   +  ++ F  I+ +K  +E  CPGVVSCAD+LVL+ R+ V+  GGP+ PL+TGR+D   +  +  E  LP
Sbjct:  108 HDCFIEGCDASVLLDADEAHTSEKDASPNLSLKGFDVIDAVKSELENVCPGVVSCADLLVLAAREAVLVAGGPFYPLETGRKDSAAAYRDFAEHELP 204          
BLAST of CX291203 vs. ExPASy Swiss-Prot
Match: PER28_ARATH (Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.352e-20
Identity = 49/97 (50.52%), Postives = 60/97 (61.86%), Query Frame = 1
Query:    1 HDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLP 291
            HDC VQ CDASLL+D T   LSEK    +F +R F  I+ IK A+E +CP  VSC+DI+ L+ RD V   GGP   + TGRRDG  S  E   + LP
Sbjct:   63 HDCFVQGCDASLLIDPTTSQLSEKNAGPNFSVRGFELIDEIKTALEAQCPSTVSCSDIVTLATRDAVFLGGGPSYVVPTGRRDGFVSNPEDANEILP 159          
BLAST of CX291203 vs. ExPASy Swiss-Prot
Match: PER52_ARATH (Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.953e-19
Identity = 49/104 (47.12%), Postives = 59/104 (56.73%), Query Frame = 1
Query:    1 HDCAVQSCDASLLLDSTRKTLSEKEM-DRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSM 309
            HDC V  CD S+LLD T     E+         R F  I+NIK AVE+ CPGVVSCADIL ++ RD VVALGGP   +K GRRD R +        +P    S+
Sbjct:   70 HDCFVNGCDGSILLDDTSSFTGEQNAAPNRNSARGFNVIDNIKSAVEKACPGVVSCADILAIAARDSVVALGGPNWNVKVGRRDARTASQAAANSNIPAPTSSL 173          
BLAST of CX291203 vs. ExPASy Swiss-Prot
Match: PER8_ARATH (Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.682e-19
Identity = 42/87 (48.28%), Postives = 58/87 (66.67%), Query Frame = 1
Query:    1 HDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKS 261
            HDC V+ CDASLL+D T +  SEK + R+ G+R F  I+  K+ +E  CP  VSCADI+ ++ RD +   GGP   ++TGRRDG +S
Sbjct:   62 HDCVVKGCDASLLIDPTTERPSEKSVGRNAGVRGFEIIDEAKKELELVCPKTVSCADIVTIATRDSIALAGGPKFKVRTGRRDGLRS 148          
BLAST of CX291203 vs. ExPASy Swiss-Prot
Match: PER1_ORYSJ (Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PRX74 PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 5.682e-19
Identity = 45/97 (46.39%), Postives = 60/97 (61.86%), Query Frame = 1
Query:    1 HDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLP 291
            HDC V+ CD S+LLDS   + +EK+   +  +R F ++E +K AVE+ CPG VSCAD+L L  RD V    GP+  +  GRRDGR S A   +Q  P
Sbjct:   64 HDCFVRGCDGSVLLDSAGNSTAEKDATPNQTLRGFGFVERVKAAVEKACPGTVSCADVLALMARDAVWLSKGPFWAVPLGRRDGRVSIANETDQLPP 160          
BLAST of CX291203 vs. ExPASy Swiss-Prot
Match: PER64_ARATH (Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.421e-19
Identity = 44/89 (49.44%), Postives = 59/89 (66.29%), Query Frame = 1
Query:    1 HDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRA 267
            HDC V+ CD S+LLDS  K  +EK+   +  +  F  I+N K+A+E +CPG+VSCADIL L+ RD V   GGP   +  GR+DGR S+A
Sbjct:   63 HDCFVRGCDGSVLLDSKGKNKAEKDGPPNISLHAFYVIDNAKKALEEQCPGIVSCADILSLAARDAVALSGGPTWAVPKGRKDGRISKA 151          
BLAST of CX291203 vs. ExPASy Swiss-Prot
Match: PER66_ARATH (Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.266e-18
Identity = 42/89 (47.19%), Postives = 59/89 (66.29%), Query Frame = 1
Query:    1 HDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRA 267
            HDC ++ CDAS+LLDSTR   +EK+   +  +R+F  IE+ K  +E+ CP  VSCAD++ ++ RD V   GGPY  +  GR+DG  SRA
Sbjct:   66 HDCFIRGCDASILLDSTRSNQAEKDGPPNISVRSFYVIEDAKRKLEKACPRTVSCADVIAIAARDVVTLSGGPYWSVLKGRKDGTISRA 154          
The following BLAST results are available for this feature:
BLAST of CX291203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 102
Match NameE-valueIdentityDescription
PER42_ARATH2.291e-4479.61Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=... [more]
PER21_ARATH4.637e-2958.65Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=... [more]
PER47_ARATH6.071e-2146.67Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=... [more]
PER48_ARATH1.352e-2044.33Putative Peroxidase 48 OS=Arabidopsis thaliana GN=... [more]
PER28_ARATH1.352e-2050.52Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=... [more]
PER52_ARATH1.953e-1947.12Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=... [more]
PER8_ARATH5.682e-1948.28Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 ... [more]
PER1_ORYSJ5.682e-1946.39Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER64_ARATH7.421e-1949.44Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=... [more]
PER66_ARATH1.266e-1847.19Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC03005C08SK OF2 Citrus clementina cDNA clone C03005C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291203 ID=CX291203; Name=CX291203; organism=Citrus clementina; type=EST; length=310bp
CATGACTGTGCTGTCCAGTCTTGTGATGCTTCACTGCTTCTGGACTCGAC
AAGAAAGACCTTGTCTGAGAAGGAGATGGACAGGAGCTTTGGTATGAGGA
ACTTCAGGTACATTGAGAACATCAAAGAAGCTGTTGAAAGAGAGTGCCCT
GGTGTTGTTTCCTGTGCTGATATCCTTGTCCTGTCCGGTAGAGATGGCGT
TGTTGCGCTTGGAGGCCCTTACATTCCTCTCAAGACAGGAAGAAGAGATG
GTAGAAAAAGCAGAGCAGAGATACTTGAGCAGTATCTCCCAGATCACAAT
GACAGCATGT
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