CX291205

Overview
NameCX291205
Unique NameCX291205
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length363
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291205 vs. ExPASy Swiss-Prot
Match: CADH9_ARATH (Probable cinnamyl alcohol dehydrogenase 9 OS=Arabidopsis thaliana GN=CAD9 PE=1 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 2.641e-40
Identity = 79/120 (65.83%), Postives = 98/120 (81.67%), Query Frame = 2
Query:    2 LGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXXPEKPLKVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVK 361
            LGAD+FLV++DP K+KAA+GTMDYIIDT+SAVH+L P                PEKPL++P+F LV  R++VGGS++GGMKETQEMLDFCAKHNI ADIEL++MD+INTA+ERLAKSDV+
Sbjct:  227 LGADSFLVTTDPQKMKAAIGTMDYIIDTISAVHALYPLLGLLKVNGKLIALGLPEKPLELPMFPLVLGRKMVGGSDVGGMKETQEMLDFCAKHNITADIELIKMDEINTAMERLAKSDVR 346          
BLAST of CX291205 vs. ExPASy Swiss-Prot
Match: MTDH1_STYHU (Probable mannitol dehydrogenase 1 OS=Stylosanthes humilis GN=CAD1 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 1.003e-39
Identity = 79/120 (65.83%), Postives = 94/120 (78.33%), Query Frame = 2
Query:    2 LGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXXPEKPLKVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVK 361
            LGAD+FL+SSDP K+KAA GTMDYIIDT+SAVHSL                  P KPL++PIF LV  R+L+GGSN GG+KETQEMLDFC KHNIAA+IEL++MD+INTAIERL+K+DVK
Sbjct:  219 LGADSFLLSSDPEKMKAATGTMDYIIDTISAVHSLVSLLGLLKLNGKLVTVGLPSKPLQLPIFPLVAGRKLIGGSNFGGLKETQEMLDFCGKHNIAANIELIKMDEINTAIERLSKADVK 338          
BLAST of CX291205 vs. ExPASy Swiss-Prot
Match: MTDH_MEDSA (Probable mannitol dehydrogenase OS=Medicago sativa GN=CAD1 PE=1 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 4.980e-39
Identity = 78/120 (65.00%), Postives = 91/120 (75.83%), Query Frame = 2
Query:    2 LGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXXPEKPLKVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVK 361
            LGAD+FLVS DP K+KAAMGTMDYIIDT+SA HSL P                P KPL++ +F LV  R+L+GGSNIGGMKETQEMLDFC KHNI ADIEL++M +INTA+ERL K+DVK
Sbjct:  226 LGADSFLVSKDPEKMKAAMGTMDYIIDTISAAHSLMPLLGLLKLNGKLVTVGLPSKPLELSVFPLVAGRKLIGGSNIGGMKETQEMLDFCGKHNITADIELIKMHEINTAMERLHKADVK 345          
BLAST of CX291205 vs. ExPASy Swiss-Prot
Match: CADH2_ARATH (Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis thaliana GN=CAD2 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 5.698e-35
Identity = 72/120 (60.00%), Postives = 91/120 (75.83%), Query Frame = 2
Query:    2 LGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXXPEKPLKVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVK 361
            LGAD+FLV++D  K+K A+GTMD+IIDTVSA H+L P                PEKPL +PIF+LV  R++VGGS IGGMKETQEML+FCAKH I +DIEL++M  IN+A++RLAKSDV+
Sbjct:  223 LGADSFLVTTDSQKMKEAVGTMDFIIDTVSAEHALLPLFSLLKVNGKLVALGLPEKPLDLPIFSLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSDIELIKMSDINSAMDRLAKSDVR 342          
BLAST of CX291205 vs. ExPASy Swiss-Prot
Match: CADH3_ARATH (Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis thaliana GN=CAD3 PE=1 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 4.083e-33
Identity = 70/120 (58.33%), Postives = 88/120 (73.33%), Query Frame = 2
Query:    2 LGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXXPEKPLKVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVK 361
            LGAD+FLV++D  K+K A+GTMD+IIDTVSA H+L P                 EKPL +PIF LV  R++VGGS IGGMKETQEML+FCAKH I +DIEL++M  IN+A++RL KSDV+
Sbjct:  222 LGADSFLVTTDSQKMKEAVGTMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLLEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSDIELIKMSDINSAMDRLVKSDVR 341          
BLAST of CX291205 vs. ExPASy Swiss-Prot
Match: CADH8_ARATH (Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis thaliana GN=CAD8 PE=1 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 4.515e-32
Identity = 69/120 (57.50%), Postives = 84/120 (70.00%), Query Frame = 2
Query:    2 LGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXXPEKPLKVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVK 361
            LGADAFLVS DP ++K AMGTMD IIDTVSA HSL P                PEKPL++P+  L+  R++V GS IGG+KETQEM+D   KHNI ADIEL+  D +NTA+ERL K+DV+
Sbjct:  223 LGADAFLVSRDPKQIKDAMGTMDGIIDTVSATHSLLPLLGLLKHKGKLVMVGAPEKPLELPVMPLIFERKMVMGSMIGGIKETQEMIDMAGKHNITADIELISADYVNTAMERLEKADVR 342          
BLAST of CX291205 vs. ExPASy Swiss-Prot
Match: MTDH_FRAAN (Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 1.314e-31
Identity = 67/120 (55.83%), Postives = 87/120 (72.50%), Query Frame = 2
Query:    2 LGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXXPEKPLKVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVK 361
            LGAD+FLVS D  +++AA+GTMD IIDTVSA H L P                PEKPL++P+F L+  R++V GS IGGMKETQEM+DF A+HNI ADIE++ +D +NTA+ERL K+DV+
Sbjct:  225 LGADSFLVSRDQDQMQAAIGTMDGIIDTVSAQHPLLPLIGLLNSHGKLVMVGAPEKPLELPVFPLLMGRKMVAGSGIGGMKETQEMIDFAARHNITADIEVIPIDYLNTAMERLVKADVR 344          
BLAST of CX291205 vs. ExPASy Swiss-Prot
Match: CADH7_ARATH (Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis thaliana GN=CAD7 PE=1 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 1.314e-31
Identity = 68/120 (56.67%), Postives = 84/120 (70.00%), Query Frame = 2
Query:    2 LGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXXPEKPLKVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVK 361
            LGADAFLVS DP ++K AMGTMD IIDTVSA H L P                P +PL++P+F L+  R++V GS +GG+KETQEM+D   KHNI ADIEL+  D +NTA+ERLAK+DVK
Sbjct:  223 LGADAFLVSRDPKQMKDAMGTMDGIIDTVSATHPLLPLLGLLKNKGKLVMVGAPAEPLELPVFPLIFGRKMVVGSMVGGIKETQEMVDLAGKHNITADIELISADYVNTAMERLAKADVK 342          
BLAST of CX291205 vs. ExPASy Swiss-Prot
Match: MTDH_PETCR (Mannitol dehydrogenase (Fragment) OS=Petroselinum crispum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 4.992e-31
Identity = 65/120 (54.17%), Postives = 87/120 (72.50%), Query Frame = 2
Query:    2 LGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXXPEKPLKVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVK 361
            LGAD FLVSSD  +++AA GT+  IIDTVSA+H + P                PEKPL++P+F L+  R+++ GSNIGG+KETQEMLDF A+HNI AD+E++ +D +NTA+ERL KSDV+
Sbjct:  204 LGADEFLVSSDSDQMQAATGTLHGIIDTVSALHPVVPLLGLLKVNGKLVMVGAPEKPLELPVFPLLMGRKVLAGSNIGGLKETQEMLDFAAQHNITADVEVIPVDYVNTAMERLVKSDVR 323          
BLAST of CX291205 vs. ExPASy Swiss-Prot
Match: GEDH1_OCIBA (Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GEDH1 PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 8.514e-31
Identity = 63/120 (52.50%), Postives = 86/120 (71.67%), Query Frame = 2
Query:    2 LGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXXPEKPLKVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDVK 361
            LG D F+VS+DP +++AA+GT+D IIDTVSA H + P                P+KPL++P+F L+  RR + GS IGG+KETQEM+DF AK+NI AD+E++ +D INTA++RL KSDVK
Sbjct:  227 LGVDEFVVSTDPQQMQAAVGTLDGIIDTVSAPHPIVPLLSLLKPHGKLIVVGLPDKPLQLPVFPLIQGRRTIAGSGIGGLKETQEMIDFAAKNNIVADVEVIPIDYINTAMDRLLKSDVK 346          
The following BLAST results are available for this feature:
BLAST of CX291205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
CADH9_ARATH2.641e-4065.83Probable cinnamyl alcohol dehydrogenase 9 OS=Arabi... [more]
MTDH1_STYHU1.003e-3965.83Probable mannitol dehydrogenase 1 OS=Stylosanthes ... [more]
MTDH_MEDSA4.980e-3965.00Probable mannitol dehydrogenase OS=Medicago sativa... [more]
CADH2_ARATH5.698e-3560.00Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis th... [more]
CADH3_ARATH4.083e-3358.33Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis th... [more]
CADH8_ARATH4.515e-3257.50Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis th... [more]
MTDH_FRAAN1.314e-3155.83Probable mannitol dehydrogenase OS=Fragaria ananas... [more]
CADH7_ARATH1.314e-3156.67Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis th... [more]
MTDH_PETCR4.992e-3154.17Mannitol dehydrogenase (Fragment) OS=Petroselinum ... [more]
GEDH1_OCIBA8.514e-3152.50Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GE... [more]

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Properties
Property NameValue
Genbank descriptionC03005C10SK OF2 Citrus clementina cDNA clone C03005C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291205 ID=CX291205; Name=CX291205; organism=Citrus clementina; type=EST; length=363bp
ACTTGGTGCTGATGCATTCCTTGTTTCCAGTGATCCTGCTAAAGTTAAGG
CTGCTATGGGCACTATGGATTACATTATTGACACTGTGTCAGCGGTTCAT
TCCCTTGCACCACTACTTGGTCTGCTGAAAGTGAATGGAAAGCTGGTCAC
CGTGGGCTTGCCTGAGAAGCCCCTAAAGGTGCCTATTTTTGCTTTAGTTG
GGGCTCGGAGGCTTGTTGGAGGAAGCAACATTGGAGGAATGAAGGAGACA
CAAGAGATGTTGGACTTTTGCGCCAAGCACAACATTGCTGCAGACATTGA
ACTGGTCCGGATGGACCAAATTAACACAGCCATAGAAAGGCTTGCAAAGT
CTGATGTCAAGTA
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