CX291221

Overview
NameCX291221
Unique NameCX291221
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length451
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10344 contig Ccv1_Contig10344:35..485. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291221 vs. ExPASy Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 7.602e-42
Identity = 84/126 (66.67%), Postives = 99/126 (78.57%), Query Frame = 3
Query:   72 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTV 449
            +S AQL   FY+ TCPNAS I+   +Q A  SD RI  SLIRLHFHDCFVNGCDGS+LLD+ +   SI SEK + AN NS RGF VVD++K ALE+ACPGIVSC+DILA+ASE SV+L+GGPSWTV
Sbjct:   28 TSSAQLNATFYSGTCPNASAIVRSTIQQALQSDARIGGSLIRLHFHDCFVNGCDGSLLLDDTS---SIQSEKNAPANANSTRGFNVVDSIKTALENACPGIVSCSDILALASEASVSLAGGPSWTV 150          
BLAST of CX291221 vs. ExPASy Swiss-Prot
Match: PER15_IPOBA (Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 9.929e-42
Identity = 82/127 (64.57%), Postives = 100/127 (78.74%), Query Frame = 3
Query:   69 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTV 449
            S S AQL+  FY+TTCPN S I+  V+Q A  +D RI  SLIRLHFHDCFV+GCDGS+LLDN  N T+I SEK ++ N NS RGF+VVD +K A+E+ACPG+VSC DILA+ASE SV+L+GGPSW V
Sbjct:   19 SHSNAQLSSTFYSTTCPNVSAIVRTVVQQALQNDARIGGSLIRLHFHDCFVDGCDGSLLLDN--NGTTIVSEKDALPNTNSTRGFDVVDNIKTAVENACPGVVSCVDILALASESSVSLAGGPSWNV 143          
BLAST of CX291221 vs. ExPASy Swiss-Prot
Match: PER1B_ARMRU (Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 1.694e-41
Identity = 82/127 (64.57%), Postives = 98/127 (77.17%), Query Frame = 3
Query:   69 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTV 449
            S S AQLTP FY+T+CPN SNI+  ++ N   SD RITAS++RLHFHDCFVNGCD SILLDN    TS  +EK ++ N NSARGF  VD +KAA+E ACP  VSCAD+L IA++QSVNL+GGPSW V
Sbjct:   24 SLSDAQLTPTFYDTSCPNVSNIVRDIIINELRSDPRITASILRLHFHDCFVNGCDASILLDNT---TSFLTEKDALGNANSARGFPTVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRV 147          
BLAST of CX291221 vs. ExPASy Swiss-Prot
Match: PER53_ARATH (Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 8.405e-41
Identity = 83/126 (65.87%), Postives = 97/126 (76.98%), Query Frame = 3
Query:   72 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTV 449
            +S AQL   FY+ TCPNAS I+   +Q A  SD RI ASLIRLHFHDCFVNGCD SILLD+     SI SEK +  N NSARGF VVD +K ALE+ACPG+VSC+D+LA+ASE SV+L+GGPSWTV
Sbjct:   27 TSSAQLNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTG---SIQSEKNAGPNVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTV 149          
BLAST of CX291221 vs. ExPASy Swiss-Prot
Match: PER1A_ARMRU (Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 1.098e-40
Identity = 81/127 (63.78%), Postives = 95/127 (74.80%), Query Frame = 3
Query:   69 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTV 449
            S S AQLTP FY+ +CPN SNI+   + N   SD RI AS++RLHFHDCFVNGCD SILLDN    TS  +EK +  N NSARGF V+D MKAA+ESACP  VSCAD+L IA++QSV L+GGPSW V
Sbjct:   26 SLSDAQLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNT---TSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRV 149          
BLAST of CX291221 vs. ExPASy Swiss-Prot
Match: PER1C_ARMRU (Peroxidase C1C (Fragment) OS=Armoracia rusticana GN=PRXC1C PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 4.172e-40
Identity = 80/127 (62.99%), Postives = 95/127 (74.80%), Query Frame = 3
Query:   69 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTV 449
            S S AQLTP FY+ +CPN SNI+  ++ N   SD  I AS++RLHFHDCFVNGCD SILLDN    TS  +EK +  N NSARGF VVD +KAA+E ACP  VSCAD+L IA++QSVNL+GGPSW V
Sbjct:    5 SFSNAQLTPTFYDNSCPNVSNIVRDIIINELRSDPSIAASILRLHFHDCFVNGCDASILLDNT---TSFRTEKDAFGNANSARGFPVVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRV 128          
BLAST of CX291221 vs. ExPASy Swiss-Prot
Match: PERA2_ARMRU (Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 2.070e-39
Identity = 81/122 (66.39%), Postives = 94/122 (77.05%), Query Frame = 3
Query:   84 QLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTV 449
            QL   FY+ TCPNAS I+   +Q AF SD RI ASLIRLHFHDCFV+GCD SILLD+     SI SEK +  N NSARGF VVD +K ALE+ CPG+VSC+DILA+ASE SV+L+GGPSWTV
Sbjct:    1 QLNATFYSGTCPNASAIVRSTIQQAFQSDTRIGASLIRLHFHDCFVDGCDASILLDDSG---SIQSEKNAGPNANSARGFNVVDNIKTALENTCPGVVSCSDILALASEASVSLTGGPSWTV 119          
BLAST of CX291221 vs. ExPASy Swiss-Prot
Match: PER34_ARATH (Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 2.704e-39
Identity = 79/127 (62.20%), Postives = 94/127 (74.02%), Query Frame = 3
Query:   69 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTV 449
            S S AQLTP FY+ +CPN +NI+   + N   SD RI AS++RLHFHDCFVNGCD SILLDN    TS  +EK +  N NSARGF V+D MKAA+E ACP  VSCAD+L IA++QSV L+GGPSW V
Sbjct:   26 SLSAAQLTPTFYDRSCPNVTNIVRETIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNT---TSFRTEKDAFGNANSARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVTLAGGPSWRV 149          
BLAST of CX291221 vs. ExPASy Swiss-Prot
Match: PER33_ARATH (Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 2.704e-39
Identity = 78/127 (61.42%), Postives = 94/127 (74.02%), Query Frame = 3
Query:   69 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTV 449
            S S AQLTP FY+T+CP  +NI+   + N   SD RI  S++RLHFHDCFVNGCD SILLDN    TS  +EK ++ N NSARGF V+D MKAA+E ACP  VSCAD+L IA++QSV L+GGPSW V
Sbjct:   27 SFSDAQLTPTFYDTSCPTVTNIVRDTIVNELRSDPRIAGSILRLHFHDCFVNGCDASILLDNT---TSFRTEKDALGNANSARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVTLAGGPSWKV 150          
BLAST of CX291221 vs. ExPASy Swiss-Prot
Match: PER32_ARATH (Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=1 SV=3)

HSP 1 Score: 160.229 bits (404), Expect = 3.531e-39
Identity = 79/127 (62.20%), Postives = 94/127 (74.02%), Query Frame = 3
Query:   69 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTV 449
            S S AQLTP FY+ TCP+   I+   + N   SD RI AS++RLHFHDCFVNGCD SILLDN    TS  +EK +  N NSARGF V+D MKAA+E+ACP  VSCADIL IA++Q+VNL+GGPSW V
Sbjct:   25 SISSAQLTPTFYDNTCPSVFTIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNT---TSFRTEKDAAPNANSARGFPVIDRMKAAVETACPRTVSCADILTIAAQQAVNLAGGPSWRV 148          
The following BLAST results are available for this feature:
BLAST of CX291221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER54_ARATH7.602e-4266.67Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=... [more]
PER15_IPOBA9.929e-4264.57Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1[more]
PER1B_ARMRU1.694e-4164.57Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE... [more]
PER53_ARATH8.405e-4165.87Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=... [more]
PER1A_ARMRU1.098e-4063.78Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE... [more]
PER1C_ARMRU4.172e-4062.99Peroxidase C1C (Fragment) OS=Armoracia rusticana G... [more]
PERA2_ARMRU2.070e-3966.39Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1... [more]
PER34_ARATH2.704e-3962.20Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=... [more]
PER33_ARATH2.704e-3961.42Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=... [more]
PER32_ARATH3.531e-3962.20Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC03005E04SK OF2 Citrus clementina cDNA clone C03005E04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291221 ID=CX291221; Name=CX291221; organism=Citrus clementina; type=EST; length=451bp
AAAGGAAAATGTCTCCTCTTCGTTATCTTCTTGCAGCAGCTGTCCTTTCC
GCGTTTGTGCTTGACGAATCATCATCTCAAGCTCAGCTTACGCCAGATTT
TTACAACACCACATGCCCTAATGCATCAAACATCATTCTGGGTGTTCTTC
AGAATGCTTTCAATTCCGATATCCGAATCACTGCCAGCCTCATCAGGCTT
CATTTTCATGACTGCTTTGTCAACGGCTGTGATGGGTCAATCTTGCTGGA
CAACGTTGCCAATGATACGAGCATAGACAGCGAGAAATTTTCGATGGCAA
ATAATAATTCAGCAAGAGGTTTCGAAGTTGTTGATGCCATGAAAGCAGCC
CTTGAGAGTGCCTGTCCTGGCATTGTTTCCTGTGCTGATATTCTTGCCAT
TGCTTCTGAACAATCCGTCAATTTGTCAGGTGGTCCTTCATGGACAGTTC
C
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