CX291222

Overview
NameCX291222
Unique NameCX291222
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length425
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9492 contig Ccv1_Contig9492:159..583. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX291222 vs. ExPASy Swiss-Prot
Match: PER42_ARATH (Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2)

HSP 1 Score: 253.832 bits (647), Expect = 1.973e-67
Identity = 118/141 (83.69%), Postives = 131/141 (92.91%), Query Frame = 2
Query:    2 MNFYKDTCPQAEDIIREQVKLLYKRHKNTAXSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSM 424
            MNFYKDTCPQAEDI+REQVKLLYKRHKNTA SWLRNIFHDCAV+SCDASLLLDSTR+ L EKE DRSFG+RNFRYIE IKEA+ERECPGVVSC+DILVLS R+G+ A+GGPYIPLKTGRRDG KSR ++LE YLPDHN+S+
Sbjct:   33 MNFYKDTCPQAEDIVREQVKLLYKRHKNTAFSWLRNIFHDCAVESCDASLLLDSTRRELGEKEHDRSFGLRNFRYIEEIKEALERECPGVVSCSDILVLSAREGIEAVGGPYIPLKTGRRDGLKSRTDMLESYLPDHNESI 173          
BLAST of CX291222 vs. ExPASy Swiss-Prot
Match: PER21_ARATH (Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 1.920e-46
Identity = 86/142 (60.56%), Postives = 113/142 (79.58%), Query Frame = 2
Query:    2 MNFYKDTCPQAEDIIREQVKLLYKRHKNTAXSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIP-LKTGRRDGRKSRAEILEQYLPDHNDSM 424
            MN+YK++CP+AE+IIR+QV+ LY +H NTA SWLRN+FHDC V+SCDASLLL++ R   SE++  RSFGMRNF+Y++ IK+A+E+ECP  VSCADI+ LS RDG+V L GP I  +KTGRRD R S    +E  +P+HNDS+
Sbjct:   32 MNYYKESCPKAEEIIRQQVETLYYKHGNTAVSWLRNLFHDCVVKSCDASLLLETARGVESEQKSKRSFGMRNFKYVKIIKDALEKECPSTVSCADIVALSARDGIVMLKGPKIEMIKTGRRDSRGSYLGDVETLIPNHNDSL 173          
BLAST of CX291222 vs. ExPASy Swiss-Prot
Match: PER48_ARATH (Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3)

HSP 1 Score: 122.094 bits (305), Expect = 8.959e-28
Identity = 54/134 (40.30%), Postives = 86/134 (64.18%), Query Frame = 2
Query:    5 NFYKDTCPQAEDIIREQVKLLYKRHKNTAXSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLP 406
            ++Y+++CP AE II + ++ +Y    + A   +R +FHDC ++ CDAS+LLD+     SEK+   +  ++ F  I+ +K  +E  CPGVVSCAD+LVL+ R+ V+  GGP+ PL+TGR+D   +  +  E  LP
Sbjct:   71 DYYRESCPTAEKIIAKAIRDIYNVTPSVAPPIIRLLFHDCFIEGCDASVLLDADEAHTSEKDASPNLSLKGFDVIDAVKSELENVCPGVVSCADLLVLAAREAVLVAGGPFYPLETGRKDSAAAYRDFAEHELP 204          
BLAST of CX291222 vs. ExPASy Swiss-Prot
Match: PER47_ARATH (Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.446e-27
Identity = 53/128 (41.41%), Postives = 79/128 (61.72%), Query Frame = 2
Query:    2 MNFYKDTCPQAEDIIREQVKLLYKRHKNTAXSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAE 385
            M +Y  +CP AE I++  V    +     A   +R +FHDC ++ CDAS+LLDST+   +EK+   +  +R +  I++ KE +E  CPGVVSCADI+ ++ RD V   GGPY  +  GR DG++S+ E
Sbjct:   28 MTYYMMSCPFAEQIVKNSVNNALQADPTLAAGLIRMLFHDCFIEGCDASILLDSTKDNTAEKDSPANLSLRGYEIIDDAKEKIENRCPGVVSCADIVAMAARDAVFWAGGPYYDIPKGRFDGKRSKIE 155          
BLAST of CX291222 vs. ExPASy Swiss-Prot
Match: PER28_ARATH (Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.807e-27
Identity = 60/133 (45.11%), Postives = 78/133 (58.65%), Query Frame = 2
Query:    8 FYKDTCPQAEDIIREQVKLLYKRHKNTAXSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLP 406
            FY ++CP AE I+   V+  + R  +   +  R  FHDC VQ CDASLL+D T   LSEK    +F +R F  I+ IK A+E +CP  VSC+DI+ L+ RD V   GGP   + TGRRDG  S  E   + LP
Sbjct:   27 FYSESCPNAETIVENLVRQQFARDPSITAALTRMHFHDCFVQGCDASLLIDPTTSQLSEKNAGPNFSVRGFELIDEIKTALEAQCPSTVSCSDIVTLATRDAVFLGGGPSYVVPTGRRDGFVSNPEDANEILP 159          
BLAST of CX291222 vs. ExPASy Swiss-Prot
Match: PER11_ARATH (Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.095e-25
Identity = 51/142 (35.92%), Postives = 83/142 (58.45%), Query Frame = 2
Query:    2 MNFYKDTCPQAEDIIREQVKLLYKRHKNTAXSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFG-MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSM 424
            +++YK TCP   D+I+++++ + K     A   +R  FHDC VQ CD S+LLD T     EK+   +   ++ ++ ++ IK  +E ECPGVVSCAD+L +  RD  + +GGPY  +  GR+D + +  E+    LP   + +
Sbjct:   32 LDYYKSTCPTVFDVIKKEMECIVKEDPRNAAIIIRLHFHDCFVQGCDGSVLLDETETLQGEKKASPNINSLKGYKIVDRIKNIIESECPGVVSCADLLTIGARDATILVGGPYWDVPVGRKDSKTASYELATTNLPTPEEGL 173          
BLAST of CX291222 vs. ExPASy Swiss-Prot
Match: PER8_ARATH (Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.430e-25
Identity = 55/123 (44.72%), Postives = 77/123 (62.60%), Query Frame = 2
Query:    8 FYKDTCPQAEDIIREQVKLLYKRHKNTAXSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKS 376
            FY+ TCP AE I+   V   + R++    + LR  FHDC V+ CDASLL+D T +  SEK + R+ G+R F  I+  K+ +E  CP  VSCADI+ ++ RD +   GGP   ++TGRRDG +S
Sbjct:   26 FYEGTCPPAESIVGRVVFNHWDRNRTVTAALLRMQFHDCVVKGCDASLLIDPTTERPSEKSVGRNAGVRGFEIIDEAKKELELVCPKTVSCADIVTIATRDSIALAGGPKFKVRTGRRDGLRS 148          
BLAST of CX291222 vs. ExPASy Swiss-Prot
Match: PER17_ARATH (Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.430e-25
Identity = 55/134 (41.04%), Postives = 81/134 (60.45%), Query Frame = 2
Query:    8 FYKDTCPQAEDIIREQVKLLYKRHKNTAXSWLRNIFHDCAVQSCDASLLLDSTRKTLSEK-EMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLP 406
            FY +TCP+AE I+R ++K    +   +  S +R  FHDC V  CDASLLLD T   L EK  +     +R+F  +++IKEA+E+ CP  VSCADI++++ RD V   GGP   +K GR+D   +  +  +  +P
Sbjct:   27 FYSETCPEAESIVRREMKKAMIKEARSVASVMRFQFHDCFVNGCDASLLLDDTPNMLGEKLSLSNIDSLRSFEVVDDIKEALEKACPATVSCADIVIMAARDAVALTGGPDWEVKLGRKDSLTASQQDSDDIMP 160          
BLAST of CX291222 vs. ExPASy Swiss-Prot
Match: PER64_ARATH (Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.868e-25
Identity = 56/126 (44.44%), Postives = 77/126 (61.11%), Query Frame = 2
Query:    5 NFYKDTCPQAEDIIREQVKLLYKRHKNTAXSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRA 382
            ++Y  TCPQA+ I+   VK      +    + LR  FHDC V+ CD S+LLDS  K  +EK+   +  +  F  I+N K+A+E +CPG+VSCADIL L+ RD V   GGP   +  GR+DGR S+A
Sbjct:   26 HYYDHTCPQADHIVTNAVKKAMSNDQTVPAALLRMHFHDCFVRGCDGSVLLDSKGKNKAEKDGPPNISLHAFYVIDNAKKALEEQCPGIVSCADILSLAARDAVALSGGPTWAVPKGRKDGRISKA 151          
BLAST of CX291222 vs. ExPASy Swiss-Prot
Match: PERX_NICSY (Lignin-forming anionic peroxidase OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.435e-25
Identity = 63/140 (45.00%), Postives = 79/140 (56.43%), Query Frame = 2
Query:    8 FYKDTCPQAEDIIREQVKLLYKRHKNTAXSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGM-RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSM 424
            FY +TCP A + IR  V+      +  A S +R  FHDC VQ CDAS+LLD T    SEK    + G  R F  IE+ K  VE+ CPGVVSCADIL ++ RD   A+GGP   +K GRRD   +   + E  LP   D +
Sbjct:   33 FYDNTCPNALNTIRTSVRQAISSERRMAASLIRLHFHDCFVQGCDASILLDETPSIESEKTALPNLGSARGFGIIEDAKREVEKICPGVVSCADILTVAARDASAAVGGPSWTVKLGRRDSTTASKTLAETDLPGPFDPL 172          
The following BLAST results are available for this feature:
BLAST of CX291222 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 105
Match NameE-valueIdentityDescription
PER42_ARATH1.973e-6783.69Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=... [more]
PER21_ARATH1.920e-4660.56Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=... [more]
PER48_ARATH8.959e-2840.30Putative Peroxidase 48 OS=Arabidopsis thaliana GN=... [more]
PER47_ARATH4.446e-2741.41Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=... [more]
PER28_ARATH5.807e-2745.11Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=... [more]
PER11_ARATH1.095e-2535.92Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=... [more]
PER8_ARATH1.430e-2544.72Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 ... [more]
PER17_ARATH1.430e-2541.04Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=... [more]
PER64_ARATH1.868e-2544.44Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=... [more]
PERX_NICSY5.435e-2545.00Lignin-forming anionic peroxidase OS=Nicotiana syl... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC03005E07SK OF2 Citrus clementina cDNA clone C03005E07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291222 ID=CX291222; Name=CX291222; organism=Citrus clementina; type=EST; length=425bp
TATGAATTTTTACAAGGATACATGCCCTCAGGCCGAGGACATTATCAGGG
AACAAGTTAAGCTTCTGTACAAGCGCCACAAGAACACTGCATTNTCTTGG
CTTAGAAACATTTTCCATGACTGTGCTGTCCAGTCTTGTGATGCTTCACT
GCTTCTGGACTCGACAAGAAAGACCTTGTCTGAGAAGGAGATGGACAGGA
GCTTTGGTATGAGGAACTTCAGGTACATTGAGAACATCAAAGAAGCTGTT
GAAAGAGAGTGCCCTGGTGTTGTTTCCTGTGCTGATATCCTTGTCCTGTC
CGGTAGAGATGGCGTTGTTGCGCTTGGAGGCCCTTACATTCCTCTCAAGA
CAGGAAGAAGAGATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCAGTAT
CTCCCAGATCACAATGACAGCATGT
back to top