CX291226

Overview
NameCX291226
Unique NameCX291226
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length454
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX291226 vs. ExPASy Swiss-Prot
Match: DRPE_CRAPL (Desiccation-related protein PCC13-62 OS=Craterostigma plantagineum PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 1.037e-49
Identity = 91/134 (67.91%), Postives = 108/134 (80.60%), Query Frame = 2 
Query:   53 VPGSDVDLLEFPLNLEYLEAEFFLFGSLGYGLDRVAPNLTLGGPAPIGAKKANLDPFTNDVVLQFAWQEVGHLRAIKKTVKGFPRPLLDLSAGSFAKVIDKAFGKPLNPPFDPYANSINYLIASYLVPYVGLTG 454
            +P SDV LLEFPLNLE LEAEFF + + G G+D + P L  GGP+PIG +KANL PF  D++ QFA+QE GH+RAI+ +V+GFPRPLLDLSA SFA V+D AFGK L PPFDPYAN INYL+A Y+VPYVGLTG
Sbjct:   35 IPKSDVSLLEFPLNLELLEAEFFAWAAFGKGIDELEPELAKGGPSPIGVQKANLSPFIRDIIAQFAYQEFGHVRAIQSSVEGFPRPLLDLSAKSFATVMDSAFGKTLKPPFDPYANDINYLLACYVVPYVGLTG 168
The following BLAST results are available for this feature:
BLAST of CX291226 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DRPE_CRAPL1.037e-4967.91Desiccation-related protein PCC13-62 OS=Craterosti... [more]
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Properties
Property NameValue
Genbank descriptionC03005E11SK OF2 Citrus clementina cDNA clone C03005E11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291226 ID=CX291226; Name=CX291226; organism=Citrus clementina; type=EST; length=454bp
TTTTGCTTCATTGATTCTGCTACTGCTTCCAGGATTATATTCTTCCACAT
CAGTTCCCGGATCTGATGTTGATCTTCTAGAGTTTCCATTGAATTTAGAG
TATTTGGAAGCTGAATTCTTTTTATTTGGTTCGTTGGGTTATGGCTTGGA
CAGAGTTGCACCAAATTTAACACTCGGAGGTCCAGCTCCTATTGGTGCCA
AAAAGGCCAACCTTGATCCATTCACTAATGATGTTGTCTTGCAATTTGCT
TGGCAAGAAGTTGGACACTTGAGGGCTATTAAGAAGACAGTGAAGGGATT
TCCAAGGCCATTGCTGGATTTGAGTGCAGGATCATTTGCAAAAGTGATTG
ATAAGGCATTCGGGAAGCCTTTGAATCCTCCTTTTGATCCTTACGCCAAC
AGCATCAATTACCTCATTGCATCTTACCTCGTTCCCTATGTTGGACTCAC
TGGC
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