CX291231
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291231 vs. ExPASy Swiss-Prot
Match: NDUAD_BOVIN (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 OS=Bos taurus GN=NDUFA13 PE=1 SV=3) HSP 1 Score: 81.6481 bits (200), Expect = 3.859e-15 Identity = 51/139 (36.69%), Postives = 77/139 (55.40%), Query Frame = 3 Query: 30 AERVKQDMPPKGGYRKINFARVFPKPFASSRALVGTYIVCTGVGWYFYLLNDRQVDKYQVESRSSIIALTPLLDAEADREYLKQLRKNRDAEEKLMKNVKGWKTGTLYGEPVYKTVGKDKLIEPGLNEYY-VHAPDKVL 443 A +VKQDMPP GGY I++ R P+ S ++ I G++ + +R+ + Q+E + IAL PLL AE DR L+ LR+N + E +MK+V GWK GE V+ T + + P + E Y + A ++VL Sbjct: 3 ASKVKQDMPPVGGYGPIDYKRNLPRRGLSGYSMFAVGIGALLFGYWSMMKWNRERRRLQIEDFEARIALMPLLQAEKDRRVLQMLRENLEEEATVMKDVPGWKV----GESVFHTT---RWVTPMMGELYGLRASEEVL 134
BLAST of CX291231 vs. ExPASy Swiss-Prot
Match: NDUAD_PONPY (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 OS=Pongo pygmaeus GN=NDUFA13 PE=2 SV=3) HSP 1 Score: 77.411 bits (189), Expect = 7.278e-14 Identity = 50/135 (37.04%), Postives = 72/135 (53.33%), Query Frame = 3 Query: 30 AERVKQDMPPKGGYRKINFARVFPKPFASSRALVGTYIVCTGVGWYFY-----LLNDRQVDKYQVESRSSIIALTPLLDAEADREYLKQLRKNRDAEEKLMKNVKGWKTGTLYGEPVYKTVGKDKLIEPGLNEYY 419 A +VKQDMPP GGY I++ R P+ R L G ++ G+G Y + +R+ + Q+E + IAL PLL AE DR L+ LR+N + E +MK+V WK GE V+ T + + P + E Y Sbjct: 3 ASKVKQDMPPPGGYGPIDYKRNLPR-----RGLSGYSMLALGIGTLIYGHWSMMKWNRERRRLQIEDFEARIALLPLLQAETDRRTLQMLRENLEEEAIIMKDVPDWKV----GESVFHTT---RWVAPLIGELY 125
BLAST of CX291231 vs. ExPASy Swiss-Prot
Match: NDUAD_PANTR (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 OS=Pan troglodytes GN=NDUFA13 PE=2 SV=3) HSP 1 Score: 77.411 bits (189), Expect = 7.278e-14 Identity = 50/135 (37.04%), Postives = 72/135 (53.33%), Query Frame = 3 Query: 30 AERVKQDMPPKGGYRKINFARVFPKPFASSRALVGTYIVCTGVGWYFY-----LLNDRQVDKYQVESRSSIIALTPLLDAEADREYLKQLRKNRDAEEKLMKNVKGWKTGTLYGEPVYKTVGKDKLIEPGLNEYY 419 A +VKQDMPP GGY I++ R P+ R L G ++ G+G Y + +R+ + Q+E + IAL PLL AE DR L+ LR+N + E +MK+V WK GE V+ T + + P + E Y Sbjct: 3 ASKVKQDMPPPGGYGPIDYKRNLPR-----RGLSGYSMLAIGIGTLIYGHWSIMKWNRERRRLQIEDFEARIALLPLLQAETDRRTLQMLRENLEEEAIIMKDVPDWKV----GESVFHTT---RWVPPLIGELY 125
BLAST of CX291231 vs. ExPASy Swiss-Prot
Match: NDUAD_HUMAN (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 OS=Homo sapiens GN=NDUFA13 PE=1 SV=3) HSP 1 Score: 77.411 bits (189), Expect = 7.278e-14 Identity = 50/135 (37.04%), Postives = 72/135 (53.33%), Query Frame = 3 Query: 30 AERVKQDMPPKGGYRKINFARVFPKPFASSRALVGTYIVCTGVGWYFY-----LLNDRQVDKYQVESRSSIIALTPLLDAEADREYLKQLRKNRDAEEKLMKNVKGWKTGTLYGEPVYKTVGKDKLIEPGLNEYY 419 A +VKQDMPP GGY I++ R P+ R L G ++ G+G Y + +R+ + Q+E + IAL PLL AE DR L+ LR+N + E +MK+V WK GE V+ T + + P + E Y Sbjct: 3 ASKVKQDMPPPGGYGPIDYKRNLPR-----RGLSGYSMLAIGIGTLIYGHWSIMKWNRERRRLQIEDFEARIALLPLLQAETDRRTLQMLRENLEEEAIIMKDVPDWKV----GESVFHTT---RWVPPLIGELY 125
BLAST of CX291231 vs. ExPASy Swiss-Prot
Match: NDUAD_GORGO (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 OS=Gorilla gorilla gorilla GN=NDUFA13 PE=2 SV=3) HSP 1 Score: 77.411 bits (189), Expect = 7.278e-14 Identity = 50/135 (37.04%), Postives = 72/135 (53.33%), Query Frame = 3 Query: 30 AERVKQDMPPKGGYRKINFARVFPKPFASSRALVGTYIVCTGVGWYFY-----LLNDRQVDKYQVESRSSIIALTPLLDAEADREYLKQLRKNRDAEEKLMKNVKGWKTGTLYGEPVYKTVGKDKLIEPGLNEYY 419 A +VKQDMPP GGY I++ R P+ R L G ++ G+G Y + +R+ + Q+E + IAL PLL AE DR L+ LR+N + E +MK+V WK GE V+ T + + P + E Y Sbjct: 3 ASKVKQDMPPPGGYGPIDYKRNLPR-----RGLSGYSMLAIGIGTLIYGHWSIMKWNRERRRLQIEDFEARIALLPLLQAETDRRTLQMLRENLEEEAIIMKDVPDWKV----GESVFHTT---RWVPPLIGELY 125
BLAST of CX291231 vs. ExPASy Swiss-Prot
Match: NDUAD_MACFA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 OS=Macaca fascicularis GN=NDUFA13 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.047e-13 Identity = 48/133 (36.09%), Postives = 70/133 (52.63%), Query Frame = 3 Query: 36 RVKQDMPPKGGYRKINFARVFPKPFASSRALVGTYIVCTGVGWYFY-----LLNDRQVDKYQVESRSSIIALTPLLDAEADREYLKQLRKNRDAEEKLMKNVKGWKTGTLYGEPVYKTVGKDKLIEPGLNEYY 419 +VKQDMPP GGY I++ R P+ R L G ++ G+G Y + +R+ + Q+E + IAL PL AE DR L+ LR+N + E +MK+V WK GE V+ T + + P + E Y Sbjct: 24 KVKQDMPPPGGYGPIDYKRNLPR-----RGLSGYSMLAIGIGTLVYGHWSIMKWNRERRRLQIEDFEARIALMPLFQAETDRRTLQMLRENLEEEAIIMKDVPDWKV----GESVFHTT---RWVPPLIGELY 144
BLAST of CX291231 vs. ExPASy Swiss-Prot
Match: NDUAD_MOUSE (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 OS=Mus musculus GN=Ndufa13 PE=1 SV=3) HSP 1 Score: 70.4774 bits (171), Expect = 8.897e-12 Identity = 44/130 (33.85%), Postives = 68/130 (52.31%), Query Frame = 3 Query: 30 AERVKQDMPPKGGYRKINFARVFPKPFASSRALVGTYIVCTGVGWYFYLLNDRQVDKYQVESRSSIIALTPLLDAEADREYLKQLRKNRDAEEKLMKNVKGWKTGTLYGEPVYKTVGKDKLIEPGLNEYY 419 A +VKQDMPP GGY I++ R P+ S ++ I G++ + +++ + +E + IAL PL AE DR L+ LR+N + E +MK+V WK GE V+ T + + P + E Y Sbjct: 3 ASKVKQDMPPPGGYGPIDYKRNLPRRGLSGYSMFAVGIGALIFGYWRMMRWNQERRRLLIEDLEARIALMPLFQAEKDRRTLQILRENLEEEAIIMKDVPNWKV----GESVFHTT---RWVPPLIGEMY 125 The following BLAST results are available for this feature:
BLAST of CX291231 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX291231 ID=CX291231; Name=CX291231; organism=Citrus clementina; type=EST; length=663bpback to top |