CX291251
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX291251 vs. ExPASy Swiss-Prot
Match: ATPG3_IPOBA (ATP synthase subunit gamma, mitochondrial OS=Ipomoea batatas GN=ATPC PE=1 SV=2) HSP 1 Score: 306.22 bits (783), Expect = 6.041e-83 Identity = 152/175 (86.86%), Postives = 169/175 (96.57%), Query Frame = 2 Query: 2 MKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSXKDIELIITELQKNPLNYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYE 526 MKMVAASKLRAIQ +AENSRGLWQPFTALLGDTP+VD KKNVI+TISSDKGLCGGINST+VK S+++HKLNSGP+KENKYVILGEKAKA LVRDS KDIELIITELQKNPLNYTQVSV+ADDILKNVEFDALRI+++KF SVVSF+PTM+TVLSPE+VERE+ESGGKLG+LDSYE Sbjct: 68 MKMVAASKLRAIQTRAENSRGLWQPFTALLGDTPSVDVKKNVIITISSDKGLCGGINSTSVKTSRNIHKLNSGPEKENKYVILGEKAKAQLVRDSKKDIELIITELQKNPLNYTQVSVVADDILKNVEFDALRIVFNKFQSVVSFVPTMSTVLSPEVVERESESGGKLGDLDSYE 242
BLAST of CX291251 vs. ExPASy Swiss-Prot
Match: ATPG3_ARATH (ATP synthase subunit gamma, mitochondrial OS=Arabidopsis thaliana GN=ATPC PE=1 SV=1) HSP 1 Score: 281.182 bits (718), Expect = 2.081e-75 Identity = 135/175 (77.14%), Postives = 162/175 (92.57%), Query Frame = 2 Query: 2 MKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSXKDIELIITELQKNPLNYTQVSVLADDILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYE 526 MKMVAASKLRA+Q +AENSRGLWQPFTALLGD P++D KK+V+VT+SSDKGLCGGINST VK+S++L+KLN+GP+KE ++VI+GEKAKAI+ RDS DI L +TEL KNPLNY QVSVLADDILKNVEFDALRI+Y+KFHSVV+FLPT++TVLSPE++E+E+E GGKLGELDSYE Sbjct: 65 MKMVAASKLRAVQGRAENSRGLWQPFTALLGDNPSIDVKKSVVVTLSSDKGLCGGINSTVVKVSRALYKLNAGPEKEVQFVIVGEKAKAIMFRDSKNDIVLSVTELNKNPLNYAQVSVLADDILKNVEFDALRIVYNKFHSVVAFLPTVSTVLSPEIIEKESEIGGKLGELDSYE 239
BLAST of CX291251 vs. ExPASy Swiss-Prot
Match: ATPG_ROSDO (ATP synthase gamma chain OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=atpG PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 9.197e-15 Identity = 56/195 (28.72%), Postives = 99/195 (50.77%), Query Frame = 2 Query: 2 MKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRD--SXKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYE 526 M+MVAA+KLR Q AE SR + F A++ + T K +++ ++S++GLCGG N+ K++++ + G K+ K + +G+K + L RD S + +TE+++ ++Y +A D+L EFD I Y+KF +VVS +PT ++ + ++E E L + + E Sbjct: 24 MQMVAAAKLRRAQEAAEQSRPYTERFNAVMAGLAASVGGSDSAPKLLSGTGSDKVQLLIVMTSERGLCGGFNTNIAKLARAHAQKLQGEGKDVKILTVGKKGRDQLKRDLGSLFIGHVDLTEIKR--VSYVDAQGIAKDVLNRFDVGEFDVATIFYAKFVNVVSQIPTAQQIIPAKFEQQEGEEASTLFDYEPDE 216
BLAST of CX291251 vs. ExPASy Swiss-Prot
Match: ATPG_BOVIN (ATP synthase subunit gamma, mitochondrial OS=Bos taurus GN=ATP5C1 PE=1 SV=3) HSP 1 Score: 73.9442 bits (180), Expect = 5.046e-13 Identity = 56/177 (31.64%), Postives = 93/177 (52.54%), Query Frame = 2 Query: 2 MKMVAASKLRAIQVKAENSRGLWQPFTALL--GDTPTV-DAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSXKDIELIITELQKNPLNYTQVSVLADDILKN-VEFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDS 520 MKMVAA+K + + + +R AL D T D KK++I+ +SSD+GLCG I+S+ K KS + KE K + +G+K ++IL R + E+ + P + SV+A ++L + EFD II+++F SV+S+ + S + + AES ++D+ Sbjct: 48 MKMVAAAKYARAERELKPARVYGVGSLALYEKADIKTPEDKKKHLIIGVSSDRGLCGAIHSSVAKQMKSEAANLAAAGKEVKIIGVGDKIRSILHRTHSDQFLVTFKEVGRRPPTFGDASVIALELLNSGYEFDEGSIIFNRFRSVISYKTEEKPIFSLDTIS-SAESMSIYDDIDA 223
BLAST of CX291251 vs. ExPASy Swiss-Prot
Match: ATPG_DINSH (ATP synthase gamma chain OS=Dinoroseobacter shibae (strain DFL 12) GN=atpG PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.591e-13 Identity = 55/193 (28.50%), Postives = 98/193 (50.78%), Query Frame = 2 Query: 2 MKMVAASKLRAIQVKAENSRGLWQPFTALL-------GDTP--------TVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSXKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLGELDSYE 526 M+MVAA+KLR Q AE SR + F A+L GD+ T + +++V +++++GLCGG NS+ K++++ + K K + +G+K + L RD K + + ++Y + +A D+L EFD I +++F SV+S +PT ++ P E +A++ L + + E Sbjct: 24 MQMVAAAKLRRAQDAAEASRPYTERFNAVLAGLAASVGDSDSGPRLLVGTGSDQTHLLVVMTAERGLCGGFNSSIAKLARAHAEKLVAQGKTVKILTVGKKGREQLKRDLSKHFIGHVDLSEVKRVSYDNAADIAADVLGRFDAGEFDVATIFFNRFQSVISQIPTAQQII-PASFEGDADADATLYDYEPSE 215
BLAST of CX291251 vs. ExPASy Swiss-Prot
Match: ATPG_METEP (ATP synthase gamma chain OS=Methylobacterium extorquens (strain PA1) GN=atpG PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.124e-12 Identity = 54/188 (28.72%), Postives = 90/188 (47.87%), Query Frame = 2 Query: 2 MKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSXKDIELIITELQKN-PLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLG 508 M+MVAA+KLR Q AEN R + +LG+ T T + +++V + D+GL G NS+ ++++ K K + +G+K +L R +D + +++ N P++Y + +ADDIL E FD + YS+F SV+S +PT ++ EL E + G Sbjct: 24 MQMVAAAKLRRAQNAAENGRPYAERMAQVLGNLAGNLIGGVGAPRLLTGTGQDRVHLLVVCTGDRGLAGAFNSSIARLARDHANRLMADGKTVKIITIGKKGLDVL-RRQFRDQIIASRDIRGNKPVDYPFAAEIADDILARFEAGEFDVATLFYSEFRSVISQIPTAQKLIPAELPTAEGAAATGAG 210
BLAST of CX291251 vs. ExPASy Swiss-Prot
Match: ATPG_METC4 (ATP synthase gamma chain OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=atpG PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.468e-12 Identity = 54/188 (28.72%), Postives = 90/188 (47.87%), Query Frame = 2 Query: 2 MKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSXKDIELIITELQKN-PLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGGKLG 508 M+MVAA+KLR Q AEN R + +LG+ + T + +++V + D+GL G NS+ ++++ K K + +G+K +L R +D + +++ N P++Y + +ADDIL E FD + YS+F SV+S +PT ++ EL E S G Sbjct: 24 MQMVAAAKLRRAQNAAENGRPYAERMAQVLGNLAGNLIGGVGAPRLLSGTGQDRVHLLVVCTGDRGLAGAFNSSIARLARDHANRLMADGKTVKIITIGKKGLDVL-RRQFRDQIIASRDIRGNKPVDYPFAAEIADDILARFEAGEFDVATLFYSEFRSVISQIPTAQKLIPAELPTAEGASATGAG 210
BLAST of CX291251 vs. ExPASy Swiss-Prot
Match: ATPG_METPB (ATP synthase gamma chain OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=atpG PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.272e-12 Identity = 51/185 (27.57%), Postives = 91/185 (49.19%), Query Frame = 2 Query: 2 MKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSXKDIELIITELQKN-PLNYTQVSVLADDILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPELVEREAESGG 499 M+MVAA+KLR Q AEN R + ++L + + T + +++V + D+GL G NS+ ++++ K K + +G+K +L R +D + +++ N P++Y + +ADDIL E FD + YS+F SV+S +PT ++ EL + + + G Sbjct: 24 MQMVAAAKLRRAQNAAENGRPYAEKMASVLANLAGNLIGGVGAPRLLSGTGQDRVHLLVVCTGDRGLAGAFNSSIARLARDHANRLMAEGKTVKIMTVGKKGLDVL-RRQFRDQIIASRDIRGNKPVDYPFAAEIADDILARFEAGEFDVATLFYSEFRSVISQIPTAQKIIPAELPQTDGAAKG 207
BLAST of CX291251 vs. ExPASy Swiss-Prot
Match: ATPG_RHOCS (ATP synthase gamma chain OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=atpG PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 5.579e-12 Identity = 52/184 (28.26%), Postives = 88/184 (47.83%), Query Frame = 2 Query: 2 MKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSXKDIELIITELQKNPLNYTQVSVLADDILKNV---EFDALRIIYSKFHSVVSFLPTMATVL--SPELVEREAES 493 MKMVAASKLR Q +AE R +L T T + +++V ++SD+GLCGG NST V+ ++ K +G + K + +G K + +L R+ I ++ + L++ + +L+ EFD +IY+KF S ++ + T V+ +P + AE+ Sbjct: 24 MKMVAASKLRRAQEQAEAGRPFADRMARMLASLAANVSGATGGPRLMTGTGSDQVHLLVVVTSDRGLCGGFNSTIVREARRTIKRLTGEGRTVKLLCVGRKGRDLLRREYAGMIVHSFEDVGRRRLSFADADRITAKVLELFEAGEFDVATVIYNKFRSAITQVVTAQQVIPFAPAVATEPAET 207
BLAST of CX291251 vs. ExPASy Swiss-Prot
Match: ATPG_RAT (ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus GN=Atp5c1 PE=1 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 7.287e-12 Identity = 49/149 (32.89%), Postives = 79/149 (53.02%), Query Frame = 2 Query: 2 MKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTV---DAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSXKDIELIITELQKNPLNYTQVSVLADDILKN-VEFDALRIIYSKFHSVVSF 436 MKMVAA+K + + + +R AL D KK++I+ +SSD+GLCG I+S+ K K+ + KE V +GEK K+IL R + ++ + P + SV+A ++L + EFD II+++F SV+S+ Sbjct: 23 MKMVAAAKYARAERELKPARVYGTGSLALYEKAEIKGPEDKKKHLIIGVSSDRGLCGAIHSSVAKQMKNDMAALTAAGKEVMIVGIGEKIKSILYRTHSDQFLVSFKDVGRKPPTFGDASVIALELLNSGYEFDEGSIIFNQFKSVISY 171 The following BLAST results are available for this feature:
BLAST of CX291251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291251 ID=CX291251; Name=CX291251; organism=Citrus clementina; type=EST; length=528bpback to top |