CX291266
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX291266 vs. ExPASy Swiss-Prot
Match: RL261_ARATH (60S ribosomal protein L26-1 OS=Arabidopsis thaliana GN=RPL26A PE=2 SV=2) HSP 1 Score: 225.328 bits (573), Expect = 1.077e-58 Identity = 114/146 (78.08%), Postives = 123/146 (84.25%), Query Frame = 1 Query: 34 MKYNPRVSSSRRKNRKARLTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDXVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITXXXXXXXXXXXXXXXAKGRAAAYKEKGTKFTPEDIMQSVD 471 MKYNPRV+SSRRKNRKA TA SS RR++MS+PLSTDLRQKYNVRSMP+RKDD VQ+VRGTYKGREGKVVQVYRRKWVIHIERITREKVNG+TVNVGI PSKVVIT AKGRAAA KEKGTKFT ED+MQ+VD Sbjct: 1 MKYNPRVTSSRRKNRKAHFTASSSERRVIMSSPLSTDLRQKYNVRSMPIRKDDEVQIVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGTTVNVGIQPSKVVITKLRLDKDRKSLLERKAKGRAAADKEKGTKFTSEDVMQNVD 146
BLAST of CX291266 vs. ExPASy Swiss-Prot
Match: RL262_ARATH (60S ribosomal protein L26-2 OS=Arabidopsis thaliana GN=RPL26B PE=2 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 1.455e-55 Identity = 108/146 (73.97%), Postives = 121/146 (82.88%), Query Frame = 1 Query: 34 MKYNPRVSSSRRKNRKARLTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDXVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITXXXXXXXXXXXXXXXAKGRAAAYKEKGTKFTPEDIMQSVD 471 MK+NPRVSSSRRKNRKA TAPSSVRR+LMS+PLS DLR K+NVRSMP+RKDD VQVVRGT+KGREGKV+QVYRRKWVIHIERITREKVNGSTVNVG+N S V+IT A GRAAA KEKGTKF+ ED+M++VD Sbjct: 1 MKFNPRVSSSRRKNRKAHFTAPSSVRRVLMSSPLSKDLRNKHNVRSMPIRKDDEVQVVRGTFKGREGKVMQVYRRKWVIHIERITREKVNGSTVNVGVNASNVMITKLRLDKDRKSLLERKANGRAAADKEKGTKFSAEDVMENVD 146
BLAST of CX291266 vs. ExPASy Swiss-Prot
Match: RL26_BRARA (60S ribosomal protein L26 OS=Brassica rapa GN=RPL26 PE=2 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 5.722e-52 Identity = 102/145 (70.34%), Postives = 116/145 (80.00%), Query Frame = 1 Query: 34 MKYNPRVSSSRRKNRKARLTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDXVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITXXXXXXXXXXXXXXXAKGRAAAYKEKGTKFTPEDIMQSV 468 MKYNPRV+SSRR+NRK TA SS RR+ MS+PLSTDLRQKYNVRSMP+RKDD Q+VRGTYKGREGK+ QVYRRK VIHIER+TREKVNG+TVNVG+ P+KVVIT AKGRAAA K+KGTKFT D+MQ+V Sbjct: 1 MKYNPRVTSSRRRNRKPHFTASSSERRVXMSSPLSTDLRQKYNVRSMPIRKDDEXQIVRGTYKGREGKLXQVYRRKXVIHIERLTREKVNGTTVNVGVQPTKVVITKLRLDKDRKSLLERKAKGRAAADKDKGTKFTAVDVMQNV 145
BLAST of CX291266 vs. ExPASy Swiss-Prot
Match: RL26_MOUSE (60S ribosomal protein L26 OS=Mus musculus GN=Rpl26 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 6.142e-38 Identity = 86/142 (60.56%), Postives = 103/142 (72.54%), Query Frame = 1 Query: 34 MKYNPRVSSSRRKNRKARLTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDXVQVVRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITXXXXXXXXXXXXXXXAKGRAAAYKEKGTKFTPEDI 456 MK+NP V+S R KNRK APS +RR +MS+PLS +LRQKYNVRSMP+RKDD VQVVRG YKG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+PSKVVIT AK R KEKG K+ E I Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQVG-KEKG-KYKEETI 140
BLAST of CX291266 vs. ExPASy Swiss-Prot
Match: RL26_MACFA (60S ribosomal protein L26 OS=Macaca fascicularis GN=RPL26 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 6.142e-38 Identity = 86/142 (60.56%), Postives = 103/142 (72.54%), Query Frame = 1 Query: 34 MKYNPRVSSSRRKNRKARLTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDXVQVVRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITXXXXXXXXXXXXXXXAKGRAAAYKEKGTKFTPEDI 456 MK+NP V+S R KNRK APS +RR +MS+PLS +LRQKYNVRSMP+RKDD VQVVRG YKG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+PSKVVIT AK R KEKG K+ E I Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQVG-KEKG-KYKEETI 140
BLAST of CX291266 vs. ExPASy Swiss-Prot
Match: RL26_HUMAN (60S ribosomal protein L26 OS=Homo sapiens GN=RPL26 PE=1 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 6.142e-38 Identity = 86/142 (60.56%), Postives = 103/142 (72.54%), Query Frame = 1 Query: 34 MKYNPRVSSSRRKNRKARLTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDXVQVVRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITXXXXXXXXXXXXXXXAKGRAAAYKEKGTKFTPEDI 456 MK+NP V+S R KNRK APS +RR +MS+PLS +LRQKYNVRSMP+RKDD VQVVRG YKG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+PSKVVIT AK R KEKG K+ E I Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQVG-KEKG-KYKEETI 140
BLAST of CX291266 vs. ExPASy Swiss-Prot
Match: RL26_BOVIN (60S ribosomal protein L26 OS=Bos taurus GN=RPL26 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 6.142e-38 Identity = 86/142 (60.56%), Postives = 103/142 (72.54%), Query Frame = 1 Query: 34 MKYNPRVSSSRRKNRKARLTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDXVQVVRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITXXXXXXXXXXXXXXXAKGRAAAYKEKGTKFTPEDI 456 MK+NP V+S R KNRK APS +RR +MS+PLS +LRQKYNVRSMP+RKDD VQVVRG YKG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+PSKVVIT AK R KEKG K+ E I Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQVG-KEKG-KYKEETI 140
BLAST of CX291266 vs. ExPASy Swiss-Prot
Match: RL26_RAT (60S ribosomal protein L26 OS=Rattus norvegicus GN=Rpl26 PE=1 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 8.021e-38 Identity = 86/142 (60.56%), Postives = 102/142 (71.83%), Query Frame = 1 Query: 34 MKYNPRVSSSRRKNRKARLTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDXVQVVRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITXXXXXXXXXXXXXXXAKGRAAAYKEKGTKFTPEDI 456 MK+NP V+S R KNRK APS +RR +MS+PLS +LRQKYNVRSMP+RKDD VQVVRG YKG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI PSKVVIT AK R KEKG K+ E I Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIRPSKVVITRLKLDKDRKKILERKAKSRQVG-KEKG-KYKEETI 140
BLAST of CX291266 vs. ExPASy Swiss-Prot
Match: RL26L_HUMAN (60S ribosomal protein L26-like 1 OS=Homo sapiens GN=RPL26L1 PE=1 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 8.021e-38 Identity = 84/134 (62.69%), Postives = 99/134 (73.88%), Query Frame = 1 Query: 34 MKYNPRVSSSRRKNRKARLTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDXVQVVRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITXXXXXXXXXXXXXXXAKGRAAAYKEKG 432 MK+NP V+S R KNRK APS VRR +MS+PLS +LRQKYNVRSMP+RKDD VQVVRG YKG++ GKVVQVYR+K+VI+IER+ REK NG+TV+VGI+PSKVVIT AK R KEKG Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHVRRKIMSSPLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQVG-KEKG 133
BLAST of CX291266 vs. ExPASy Swiss-Prot
Match: RL26_LITLI (60S ribosomal protein L26 OS=Littorina littorea GN=RPL26 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 3.048e-37 Identity = 84/145 (57.93%), Postives = 102/145 (70.34%), Query Frame = 1 Query: 34 MKYNPRVSSSRRKNRKARLTAPSSVRRILMSAPLSTDLRQKYNVRSMPVRKDDXVQVVRGTYKGRE-GKVVQVYRRKWVIHIERITREKVNGSTVNVGINPSKVVITXXXXXXXXXXXXXXXAKGRAAAYKEKGTKFTPEDIMQS 465 MK+N VSS R KNRK APS +RR +MS+P+S +LRQKYN RSMP+RKDD VQVVRG +KG++ GKVVQVYR+K+V+HIERI REK NG+TV VGI+PSKV+I AK RA A EKG K+T E + S Sbjct: 1 MKFNKMVSSDRGKNRKRHFNAPSHMRRKIMSSPMSKELRQKYNCRSMPIRKDDEVQVVRGHFKGQQVGKVVQVYRKKFVVHIERIQREKANGATVYVGIHPSKVLIVKLKMDKDRKRILDNKAKSRAKALAEKG-KYTEETMETS 144 The following BLAST results are available for this feature:
BLAST of CX291266 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX291266 ID=CX291266; Name=CX291266; organism=Citrus clementina; type=EST; length=479bpback to top |