CX291271

Overview
NameCX291271
Unique NameCX291271
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length452
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX291271 vs. ExPASy Swiss-Prot
Match: SRPK1_PONAB (Serine/threonine-protein kinase SRPK1 OS=Pongo abelii GN=SRPK1 PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 1.424e-27
Identity = 49/94 (52.13%), Postives = 77/94 (81.91%), Query Frame = 1
Query:   13 DEDHLALMMELLGMMPRKIALCGRYSRDFFNRHGDLRHIRRLRFWPMNKVLVEKYDFNERDAKDMADFLVPILDFVPEKRPTAAQCLXHPWMSA 294
            DEDH+AL++ELLG +PRK+ + G+YS++FF + GDL+HI +L+ W + +VLVEKY++++ +A    DFL+P+L+ +PEKR TAA+CL HPW+++
Sbjct:  562 DEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS 655          
BLAST of CX291271 vs. ExPASy Swiss-Prot
Match: SRPK1_HUMAN (Serine/threonine-protein kinase SRPK1 OS=Homo sapiens GN=SRPK1 PE=1 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 1.424e-27
Identity = 49/94 (52.13%), Postives = 77/94 (81.91%), Query Frame = 1
Query:   13 DEDHLALMMELLGMMPRKIALCGRYSRDFFNRHGDLRHIRRLRFWPMNKVLVEKYDFNERDAKDMADFLVPILDFVPEKRPTAAQCLXHPWMSA 294
            DEDH+AL++ELLG +PRK+ + G+YS++FF + GDL+HI +L+ W + +VLVEKY++++ +A    DFL+P+L+ +PEKR TAA+CL HPW+++
Sbjct:  562 DEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS 655          
BLAST of CX291271 vs. ExPASy Swiss-Prot
Match: SRPK2_MOUSE (Serine/threonine-protein kinase SRPK2 OS=Mus musculus GN=Srpk2 PE=1 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 5.412e-27
Identity = 52/94 (55.32%), Postives = 71/94 (75.53%), Query Frame = 1
Query:   13 DEDHLALMMELLGMMPRKIALCGRYSRDFFNRHGDLRHIRRLRFWPMNKVLVEKYDFNERDAKDMADFLVPILDFVPEKRPTAAQCLXHPWMSA 294
            DEDH+A ++ELLG +PR  AL G+YSR+FFNR G+LRHI +L+ W +  VLVEKY +   DA    DFL+P+L+ VPEKR +A +CL HPW+++
Sbjct:  588 DEDHIAHIIELLGSIPRHFALSGKYSREFFNRRGELRHITKLKPWSLFDVLVEKYGWPHEDAAQFTDFLIPMLEMVPEKRASAGECLRHPWLNS 681          
BLAST of CX291271 vs. ExPASy Swiss-Prot
Match: SRPK1_MOUSE (Serine/threonine-protein kinase SRPK1 OS=Mus musculus GN=Srpk1 PE=1 SV=2)

HSP 1 Score: 119.783 bits (299), Expect = 5.412e-27
Identity = 49/94 (52.13%), Postives = 76/94 (80.85%), Query Frame = 1
Query:   13 DEDHLALMMELLGMMPRKIALCGRYSRDFFNRHGDLRHIRRLRFWPMNKVLVEKYDFNERDAKDMADFLVPILDFVPEKRPTAAQCLXHPWMSA 294
            DEDH+AL++ELLG +PRK+ + G+YS++FF + GDL+HI +L+ W + +VLVEKY++ + +A    DFL+P+L+ +PEKR TAA+CL HPW+++
Sbjct:  555 DEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLLEVLVEKYEWPQEEAAGFTDFLLPMLELMPEKRATAAECLRHPWLNS 648          
BLAST of CX291271 vs. ExPASy Swiss-Prot
Match: SRPK3_HUMAN (Serine/threonine-protein kinase SRPK3 OS=Homo sapiens GN=SRPK3 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 8.641e-25
Identity = 48/93 (51.61%), Postives = 70/93 (75.27%), Query Frame = 1
Query:   13 DEDHLALMMELLGMMPRKIALCGRYSRDFFNRHGDLRHIRRLRFWPMNKVLVEKYDFNERDAKDMADFLVPILDFVPEKRPTAAQCLXHPWMS 291
            DEDH+A ++ELLG +P   AL GRYSR+FFNR G+LRHI  L+ W + +VL+EKY++    A   + FL+P+++++PEKR +AA CL HPW++
Sbjct:  440 DEDHIAHIVELLGDIPPAFALSGRYSREFFNRRGELRHIHNLKHWGLYEVLMEKYEWPLEQATQFSAFLLPMMEYIPEKRASAADCLQHPWLN 532          
BLAST of CX291271 vs. ExPASy Swiss-Prot
Match: SRPK2_HUMAN (Serine/threonine-protein kinase SRPK2 OS=Homo sapiens GN=SRPK2 PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 1.129e-24
Identity = 50/94 (53.19%), Postives = 68/94 (72.34%), Query Frame = 1
Query:   13 DEDHLALMMELLGMMPRKIALCGRYSRDFFNRHGDLRHIRRLRFWPMNKVLVEKYDFNERDAKDMADFLVPILDFVPEKRPTAAQCLXHPWMSA 294
            DEDH+A ++ELLG +PR  AL G+YSR+FFNR G+LRHI +L+ W +  VLVEKY +   DA    DFL+P+L+ VPEKR +A     HPW+++
Sbjct:  595 DEDHIAHIIELLGSIPRHFALSGKYSREFFNRRGELRHITKLKPWSLFDVLVEKYGWPHEDAAQFTDFLIPMLEMVPEKRASAGCLCRHPWLNS 688          
BLAST of CX291271 vs. ExPASy Swiss-Prot
Match: SRPK3_MOUSE (Serine/threonine-protein kinase SRPK3 OS=Mus musculus GN=Srpk3 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.474e-24
Identity = 48/93 (51.61%), Postives = 70/93 (75.27%), Query Frame = 1
Query:   13 DEDHLALMMELLGMMPRKIALCGRYSRDFFNRHGDLRHIRRLRFWPMNKVLVEKYDFNERDAKDMADFLVPILDFVPEKRPTAAQCLXHPWMS 291
            DEDH+A ++ELLG +P   AL GRYSR+FFNR G+LRHI  L+ W + +VL+EKY++    A   + FL+P+++++PEKR +AA CL HPW++
Sbjct:  472 DEDHIAHIVELLGDIPPAFALSGRYSREFFNRRGELRHIPNLKHWGLYEVLMEKYEWPLEQATQFSAFLLPMMEYIPEKRASAADCLQHPWLN 564          
BLAST of CX291271 vs. ExPASy Swiss-Prot
Match: SKY1_YEAST (Serine/threonine-protein kinase SKY1 OS=Saccharomyces cerevisiae GN=SKY1 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.291e-20
Identity = 43/92 (46.74%), Postives = 64/92 (69.57%), Query Frame = 1
Query:   13 DEDHLALMMELLGMMPRKIALCGRYSRDFFNRHGDLRHIRRLRFWPMNKVLVEKYDFNERDAKDMADFLVPILDFVPEKRPTAAQCLXHPWM 288
            D+DH+A ++ELLG +P  +   G+Y+R FFN  G LR+I +L+FWP+  VL EKY F++ +AK+++DFL P+L   P KR  A   + HPW+
Sbjct:  615 DDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWL 706          
BLAST of CX291271 vs. ExPASy Swiss-Prot
Match: DSK1_SCHPO (Protein kinase dsk1 OS=Schizosaccharomyces pombe GN=dsk1 PE=2 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 1.428e-19
Identity = 48/110 (43.64%), Postives = 72/110 (65.45%), Query Frame = 1
Query:   13 DEDHLALMMELLGMMPRKIALCGRYSRDFFNRHGDLRHIRRLRFWPMNKVLVEKYDFNERDAKDMADFLVPILDFVPEKRPTAAQCLXHPWMS--AGPRLR-EPSMAAGE 333
            ++DH+A ++ELL   P+++AL G++SRD FNR G+LR+I +L+FWP+  VL +KY F+   A+ ++DFL P+L F P KR  A      PW+   A P  + E + A GE
Sbjct:  425 EDDHIAQIIELLVNYPKQMALSGKHSRDLFNRRGELRNIHKLKFWPLKDVLEQKYHFSAELAQQISDFLSPMLCFDPAKRTNAGYMSNSPWLREVADPTFKIETTGATGE 534          
BLAST of CX291271 vs. ExPASy Swiss-Prot
Match: SKY1_DICDI (Probable serine/threonine-protein kinase sky1 OS=Dictyostelium discoideum GN=sky1 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 3.180e-19
Identity = 49/96 (51.04%), Postives = 62/96 (64.58%), Query Frame = 1
Query:   16 EDHLALMMELLGMMPRKIALCGRYSRDFFNRHGDLRHIRRLRF-WPMNKVLVEKYDFNERDAKDMADFLVPILDFVPEKRPTAAQCLXHPWMSAGP 300
            +DHLALM+ELLG  PR I   G  SR +F   GDLR I  L   WP+  VL EKY F+ ++AKD   FL+P+L+++PEKR TA  CL H W+   P
Sbjct:  557 DDHLALMIELLGKPPRFIFAGGDESRVYFTHKGDLRKIPDLSDQWPLFSVLTEKYKFSIQEAKDFEAFLLPMLNYLPEKRATAKDCLNHTWLKDVP 652          
The following BLAST results are available for this feature:
BLAST of CX291271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
SRPK1_PONAB1.424e-2752.13Serine/threonine-protein kinase SRPK1 OS=Pongo abe... [more]
SRPK1_HUMAN1.424e-2752.13Serine/threonine-protein kinase SRPK1 OS=Homo sapi... [more]
SRPK2_MOUSE5.412e-2755.32Serine/threonine-protein kinase SRPK2 OS=Mus muscu... [more]
SRPK1_MOUSE5.412e-2752.13Serine/threonine-protein kinase SRPK1 OS=Mus muscu... [more]
SRPK3_HUMAN8.641e-2551.61Serine/threonine-protein kinase SRPK3 OS=Homo sapi... [more]
SRPK2_HUMAN1.129e-2453.19Serine/threonine-protein kinase SRPK2 OS=Homo sapi... [more]
SRPK3_MOUSE1.474e-2451.61Serine/threonine-protein kinase SRPK3 OS=Mus muscu... [more]
SKY1_YEAST1.291e-2046.74Serine/threonine-protein kinase SKY1 OS=Saccharomy... [more]
DSK1_SCHPO1.428e-1943.64Protein kinase dsk1 OS=Schizosaccharomyces pombe G... [more]
SKY1_DICDI3.180e-1951.04Probable serine/threonine-protein kinase sky1 OS=D... [more]

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Properties
Property NameValue
Genbank descriptionC03006B03SK OF2 Citrus clementina cDNA clone C03006B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291271 ID=CX291271; Name=CX291271; organism=Citrus clementina; type=EST; length=452bp
TCGGCACGAGGGGATGAGGATCACTTGGCACTGATGATGGAGCTTCTCGG
GATGATGCCACGCAAGATTGCATTGTGTGGTCGCTATTCCCGTGATTTCT
TCAACAGACATGGGGACTTGAGGCACATCCGTCGTCTACGTTTTTGGCCT
ATGAATAAGGTCCTTGTAGAGAAGTACGACTTTAATGAGCGAGATGCAAA
GGACATGGCTGACTTCCTTGTTCCAATACTTGATTTCGTTCCTGAAAAGA
GACCAACAGCGGCCCAATGTCTCANTCATCCATGGATGAGTGCAGGACCT
CGACTGCGTGAGCCTTCTATGGCTGCTGGTGAGCCACGGGAGACAGAAGG
CAGTATACCTGAAAGAAAGAGGAGGGAGCANGAGGAGAGGGAGGCTATGG
AAGTGGGAGTGGGGAATATGGCCATTAATGGGGCTTCAAAGTTATCAAGC
GA
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