CX291305
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX291305 vs. ExPASy Swiss-Prot
Match: ATPG3_IPOBA (ATP synthase subunit gamma, mitochondrial OS=Ipomoea batatas GN=ATPC PE=1 SV=2) HSP 1 Score: 274.633 bits (701), Expect = 1.547e-73 Identity = 137/159 (86.16%), Postives = 152/159 (95.60%), Query Frame = 2 Query: 2 MKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSXKDIELIITELQKNPLNYTQVSVLADXILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVE 478 MKMVAASKLRAIQ +AENSRGLWQPFTALLGDTP+VD KKNVI+TISSDKGLCGGINST+VK S+++HKLNSGP+KENKYVILGEKAKA LVRDS KDIELIITELQKNPLNYTQVSV+AD ILKNVEFDALRI+++KF SVVSF+PTM+TVLSPE+VE Sbjct: 68 MKMVAASKLRAIQTRAENSRGLWQPFTALLGDTPSVDVKKNVIITISSDKGLCGGINSTSVKTSRNIHKLNSGPEKENKYVILGEKAKAQLVRDSKKDIELIITELQKNPLNYTQVSVVADDILKNVEFDALRIVFNKFQSVVSFVPTMSTVLSPEVVE 226
BLAST of CX291305 vs. ExPASy Swiss-Prot
Match: ATPG3_ARATH (ATP synthase subunit gamma, mitochondrial OS=Arabidopsis thaliana GN=ATPC PE=1 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 1.074e-66 Identity = 121/159 (76.10%), Postives = 146/159 (91.82%), Query Frame = 2 Query: 2 MKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSXKDIELIITELQKNPLNYTQVSVLADXILKNVEFDALRIIYSKFHSVVSFLPTMATVLSPELVE 478 MKMVAASKLRA+Q +AENSRGLWQPFTALLGD P++D KK+V+VT+SSDKGLCGGINST VK+S++L+KLN+GP+KE ++VI+GEKAKAI+ RDS DI L +TEL KNPLNY QVSVLAD ILKNVEFDALRI+Y+KFHSVV+FLPT++TVLSPE++E Sbjct: 65 MKMVAASKLRAVQGRAENSRGLWQPFTALLGDNPSIDVKKSVVVTLSSDKGLCGGINSTVVKVSRALYKLNAGPEKEVQFVIVGEKAKAIMFRDSKNDIVLSVTELNKNPLNYAQVSVLADDILKNVEFDALRIVYNKFHSVVAFLPTVSTVLSPEIIE 223
BLAST of CX291305 vs. ExPASy Swiss-Prot
Match: ATPG_ROSDO (ATP synthase gamma chain OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=atpG PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.989e-12 Identity = 51/173 (29.48%), Postives = 89/173 (51.45%), Query Frame = 2 Query: 2 MKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRD--SXKDIELIITELQKNPLNYTQVSVLADXILKNV---EFDALRIIYSKFHSVVSFLPTMATVL 460 M+MVAA+KLR Q AE SR + F A++ + T K +++ ++S++GLCGG N+ K++++ + G K+ K + +G+K + L RD S + +TE+++ ++Y +A +L EFD I Y+KF +VVS +PT ++ Sbjct: 24 MQMVAAAKLRRAQEAAEQSRPYTERFNAVMAGLAASVGGSDSAPKLLSGTGSDKVQLLIVMTSERGLCGGFNTNIAKLARAHAQKLQGEGKDVKILTVGKKGRDQLKRDLGSLFIGHVDLTEIKR--VSYVDAQGIAKDVLNRFDVGEFDVATIFYAKFVNVVSQIPTAQQII 194
BLAST of CX291305 vs. ExPASy Swiss-Prot
Match: ATPG_BOVIN (ATP synthase subunit gamma, mitochondrial OS=Bos taurus GN=ATP5C1 PE=1 SV=3) HSP 1 Score: 71.2478 bits (173), Expect = 2.598e-12 Identity = 51/149 (34.23%), Postives = 81/149 (54.36%), Query Frame = 2 Query: 2 MKMVAASKLRAIQVKAENSRGLWQPFTALL--GDTPTV-DAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSXKDIELIITELQKNPLNYTQVSVLADXILKN-VEFDALRIIYSKFHSVVSF 436 MKMVAA+K + + + +R AL D T D KK++I+ +SSD+GLCG I+S+ K KS + KE K + +G+K ++IL R + E+ + P + SV+A +L + EFD II+++F SV+S+ Sbjct: 48 MKMVAAAKYARAERELKPARVYGVGSLALYEKADIKTPEDKKKHLIIGVSSDRGLCGAIHSSVAKQMKSEAANLAAAGKEVKIIGVGDKIRSILHRTHSDQFLVTFKEVGRRPPTFGDASVIALELLNSGYEFDEGSIIFNRFRSVISY 196
BLAST of CX291305 vs. ExPASy Swiss-Prot
Match: ATPG_RHOCS (ATP synthase gamma chain OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=atpG PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 9.874e-12 Identity = 49/171 (28.65%), Postives = 82/171 (47.95%), Query Frame = 2 Query: 2 MKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSXKDIELIITELQKNPLNYTQVSVLADXILKNV---EFDALRIIYSKFHSVVSFLPTMATVL 460 MKMVAASKLR Q +AE R +L T T + +++V ++SD+GLCGG NST V+ ++ K +G + K + +G K + +L R+ I ++ + L++ + +L+ EFD +IY+KF S ++ + T V+ Sbjct: 24 MKMVAASKLRRAQEQAEAGRPFADRMARMLASLAANVSGATGGPRLMTGTGSDQVHLLVVVTSDRGLCGGFNSTIVREARRTIKRLTGEGRTVKLLCVGRKGRDLLRREYAGMIVHSFEDVGRRRLSFADADRITAKVLELFEAGEFDVATVIYNKFRSAITQVVTAQQVI 194
BLAST of CX291305 vs. ExPASy Swiss-Prot
Match: ATPG_METNO (ATP synthase gamma chain OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=atpG PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 9.874e-12 Identity = 47/175 (26.86%), Postives = 85/175 (48.57%), Query Frame = 2 Query: 2 MKMVAASKLRAIQVKAENSRGLWQPFTALLGD-----TPTVDAKK----------NVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSXKDIELIITELQKNPLNYTQVSVLADXILKNV---EFDALRIIYSKFHSVVSFLPTMATVLSPEL 472 M+MVAA+KLR Q AEN+R + A+LG+ TP + + +++V ++++GLCG NS+ ++++ + K K + +G+K IL R+ I +I L + + + +L EFD + YS+F SV++ +PT ++ E+ Sbjct: 24 MQMVAAAKLRRAQNAAENARPYAERMAAVLGNLATNLTPGAETPRLLAGTGADRVHLLVVCTAERGLCGAFNSSIARLARDHARRLVAEGKTVKIICVGKKGYDILRREFRDQIVELIELRGVRQLGFENAEAVTENLLNRFEAGEFDIATLFYSRFRSVIAQVPTAQQIIPAEI 198
BLAST of CX291305 vs. ExPASy Swiss-Prot
Match: ATPG_METEP (ATP synthase gamma chain OS=Methylobacterium extorquens (strain PA1) GN=atpG PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 9.874e-12 Identity = 51/176 (28.98%), Postives = 86/176 (48.86%), Query Frame = 2 Query: 2 MKMVAASKLRAIQVKAENSRGLWQPFTALLGD---------------TPTVDAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSXKDIELIITELQKN-PLNYTQVSVLADXILKNVE---FDALRIIYSKFHSVVSFLPTMATVLSPEL 472 M+MVAA+KLR Q AEN R + +LG+ T T + +++V + D+GL G NS+ ++++ K K + +G+K +L R +D + +++ N P++Y + +AD IL E FD + YS+F SV+S +PT ++ EL Sbjct: 24 MQMVAAAKLRRAQNAAENGRPYAERMAQVLGNLAGNLIGGVGAPRLLTGTGQDRVHLLVVCTGDRGLAGAFNSSIARLARDHANRLMADGKTVKIITIGKKGLDVL-RRQFRDQIIASRDIRGNKPVDYPFAAEIADDILARFEAGEFDVATLFYSEFRSVISQIPTAQKLIPAEL 198
BLAST of CX291305 vs. ExPASy Swiss-Prot
Match: ATPG_RAT (ATP synthase subunit gamma, mitochondrial OS=Rattus norvegicus GN=Atp5c1 PE=1 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 1.290e-11 Identity = 49/149 (32.89%), Postives = 78/149 (52.35%), Query Frame = 2 Query: 2 MKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTV---DAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSXKDIELIITELQKNPLNYTQVSVLADXILKN-VEFDALRIIYSKFHSVVSF 436 MKMVAA+K + + + +R AL D KK++I+ +SSD+GLCG I+S+ K K+ + KE V +GEK K+IL R + ++ + P + SV+A +L + EFD II+++F SV+S+ Sbjct: 23 MKMVAAAKYARAERELKPARVYGTGSLALYEKAEIKGPEDKKKHLIIGVSSDRGLCGAIHSSVAKQMKNDMAALTAAGKEVMIVGIGEKIKSILYRTHSDQFLVSFKDVGRKPPTFGDASVIALELLNSGYEFDEGSIIFNQFKSVISY 171
BLAST of CX291305 vs. ExPASy Swiss-Prot
Match: ATPG_HUMAN (ATP synthase subunit gamma, mitochondrial OS=Homo sapiens GN=ATP5C1 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.290e-11 Identity = 49/149 (32.89%), Postives = 77/149 (51.68%), Query Frame = 2 Query: 2 MKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTV---DAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSXKDIELIITELQKNPLNYTQVSVLADXILKN-VEFDALRIIYSKFHSVVSF 436 MKMVAA+K + + + +R AL D KK++++ +SSD+GLCG I+S+ K KS + KE V +G+K + IL R + E+ + P + SV+A +L + EFD II++KF SV+S+ Sbjct: 48 MKMVAAAKYARAERELKPARIYGLGSLALYEKADIKGPEDKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGKEVMLVGIGDKIRGILYRTHSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSIIFNKFRSVISY 196
BLAST of CX291305 vs. ExPASy Swiss-Prot
Match: ATPG_PONAB (ATP synthase subunit gamma, mitochondrial OS=Pongo abelii GN=ATP5C1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.684e-11 Identity = 49/149 (32.89%), Postives = 77/149 (51.68%), Query Frame = 2 Query: 2 MKMVAASKLRAIQVKAENSRGLWQPFTALLGDTPTV---DAKKNVIVTISSDKGLCGGINSTAVKISKSLHKLNSGPDKENKYVILGEKAKAILVRDSXKDIELIITELQKNPLNYTQVSVLADXILKN-VEFDALRIIYSKFHSVVSF 436 MKMVAA+K + + + +R AL D KK++++ +SSD+GLCG I+S+ K KS + KE V +G+K + IL R + E+ + P + SV+A +L + EFD II++KF SV+S+ Sbjct: 48 MKMVAAAKYARAERELKPARIYGLGSLALYEKADIKGPEDKKKHLLIGVSSDRGLCGAIHSSIAKQMKSEVATLTAAGKEVMLVGVGDKIRGILYRTHSDQFLVAFKEVGRKPPTFGDASVIALELLNSGYEFDEGSIIFNKFRSVISY 196 The following BLAST results are available for this feature:
BLAST of CX291305 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CX291305 ID=CX291305; Name=CX291305; organism=Citrus clementina; type=EST; length=480bpback to top |