CX291316

Overview
NameCX291316
Unique NameCX291316
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length532
Libraries
Library NameType
OF2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15491 contig Ccv1_Contig15491:184..715. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX291316 vs. ExPASy Swiss-Prot
Match: AROF_TOBAC (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Nicotiana tabacum GN=DHAPS-1 PE=2 SV=1)

HSP 1 Score: 343.969 bits (881), Expect = 2.654e-94
Identity = 166/176 (94.32%), Postives = 171/176 (97.16%), Query Frame = 3 
Query:    3 VDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLTRLDSTSGFYYDCSAHFLWVGERTRQLDGAHVEFLKGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITIITRMGAENMRVKLPHLIRAVRRSGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDV 530
            VDEALGFM+AAGLTVDHPIM TTEFWTSHECLLLPYEQSLTRLDSTSG YYDCSAHF+WVGERTRQLDGAHVEFL+GVANPLGIKVSDKMDP+ LVKLIEILNP NK GRITIITRMGAENMRVKLPHLIRAVRR+GQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDV
Sbjct:  291 VDEALGFMAAAGLTVDHPIMKTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDCSAHFIWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPSALVKLIEILNPDNKAGRITIITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDV 466
[Close]
BLAST of CX291316 vs. ExPASy Swiss-Prot
Match: AROF_SOLTU (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Solanum tuberosum GN=SHKA PE=1 SV=2)

HSP 1 Score: 342.813 bits (878), Expect = 5.913e-94
Identity = 165/176 (93.75%), Postives = 171/176 (97.16%), Query Frame = 3 
Query:    3 VDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLTRLDSTSGFYYDCSAHFLWVGERTRQLDGAHVEFLKGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITIITRMGAENMRVKLPHLIRAVRRSGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDV 530
            VDEALGFM+AAGLT+DHPIM TTEFWTSHECLLLPYEQSLTR DSTSG YYDCSAHFLWVGERTRQLDGAHVEFL+G+ANPLGIKVSDKMDP+ LVKLIEILNPQNK GRITIITRMGAENMRVKLPHLIRAVRR+GQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDV
Sbjct:  290 VDEALGFMTAAGLTMDHPIMKTTEFWTSHECLLLPYEQSLTRRDSTSGLYYDCSAHFLWVGERTRQLDGAHVEFLRGIANPLGIKVSDKMDPSALVKLIEILNPQNKAGRITIITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDV 465
[Close]
BLAST of CX291316 vs. ExPASy Swiss-Prot
Match: AROG_SOLLC (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 340.887 bits (873), Expect = 2.247e-93
Identity = 164/176 (93.18%), Postives = 171/176 (97.16%), Query Frame = 3 
Query:    3 VDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLTRLDSTSGFYYDCSAHFLWVGERTRQLDGAHVEFLKGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITIITRMGAENMRVKLPHLIRAVRRSGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDV 530
            VDEALGFM+AAGLT+DHPIM TTEFWTSHECLLLPYEQSLTR DSTSG +YDCSAHFLWVGERTRQLDGAHVEFL+G+ANPLGIKVSDKMDP+ LVKLIEILNPQNK GRITIITRMGAENMRVKLPHLIRAVRR+GQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDV
Sbjct:  290 VDEALGFMTAAGLTMDHPIMKTTEFWTSHECLLLPYEQSLTRRDSTSGLHYDCSAHFLWVGERTRQLDGAHVEFLRGIANPLGIKVSDKMDPSALVKLIEILNPQNKAGRITIITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDV 465
[Close]
BLAST of CX291316 vs. ExPASy Swiss-Prot
Match: AROG_ORYSJ (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=DAHPS2 PE=2 SV=1)

HSP 1 Score: 336.265 bits (861), Expect = 5.534e-92
Identity = 161/176 (91.48%), Postives = 169/176 (96.02%), Query Frame = 3 
Query:    3 VDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLTRLDSTSGFYYDCSAHFLWVGERTRQLDGAHVEFLKGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITIITRMGAENMRVKLPHLIRAVRRSGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDV 530
            VDEALGFM+AAGLTVDHPIMTTT+FWTSHECLLLPYEQSLTR DSTSG +YDCSAH LWVGERTRQLDGAHVEFL+GVANPLGIKVSDKM+P +LVKLIEILNP NKPGRITIITRMGAENMRVKLPHLIRAVR SGQIVTW++DPMHGNTIKAPCGLKTRPFDSI AEVRAFFDV
Sbjct:  281 VDEALGFMTAAGLTVDHPIMTTTDFWTSHECLLLPYEQSLTREDSTSGLFYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMNPRDLVKLIEILNPSNKPGRITIITRMGAENMRVKLPHLIRAVRNSGQIVTWITDPMHGNTIKAPCGLKTRPFDSILAEVRAFFDV 456
[Close]
BLAST of CX291316 vs. ExPASy Swiss-Prot
Match: AROF_ORYSJ (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=DAHPS1 PE=2 SV=2)

HSP 1 Score: 330.102 bits (845), Expect = 3.966e-90
Identity = 159/176 (90.34%), Postives = 169/176 (96.02%), Query Frame = 3 
Query:    3 VDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLTRLDSTSGFYYDCSAHFLWVGERTRQLDGAHVEFLKGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITIITRMGAENMRVKLPHLIRAVRRSGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDV 530
            VDEALGFMSAAGLTVDHP+MT+T+FWTSHECLLLPYEQSLTR DST+G +YDCSAH LWVGERTRQLDGAHVEFL+GVANPLGIKVSDKM+P ELVKLIEILNP NKPGRITIITRMGAENMRVKLPHLIRAVR +GQIVTW++DPMHGNTIKAPCGLKTRPFDSI AEVRAFFDV
Sbjct:  296 VDEALGFMSAAGLTVDHPLMTSTDFWTSHECLLLPYEQSLTRQDSTTGHFYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMNPTELVKLIEILNPSNKPGRITIITRMGAENMRVKLPHLIRAVRHAGQIVTWITDPMHGNTIKAPCGLKTRPFDSI-AEVRAFFDV 470
[Close]
BLAST of CX291316 vs. ExPASy Swiss-Prot
Match: AROF_CATRO (Probable phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplastic OS=Catharanthus roseus GN=DHS1 PE=2 SV=2)

HSP 1 Score: 323.168 bits (827), Expect = 4.848e-88
Identity = 155/176 (88.07%), Postives = 162/176 (92.05%), Query Frame = 3 
Query:    3 VDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLTRLDSTSGFYYDCSAHFLWVGERTRQLDGAHVEFLKGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITIITRMGAENMRVKLPHLIRAVRRSGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDV 530
            VDEALGFM A GLTVDHPIM TTEFWTSHECLLLPYEQ+LTR DSTSG +YDCSAH LWVGERTRQLDGAHVEFL+GVANPLGIKVS KMDPNELV LIEILNP NKPGRIT+I RMGAENMRVKLPHLIRAVR +GQIVTWV DPMHGNTIKAPCGLKTR FD+I AEVRAF+DV
Sbjct:  254 VDEALGFMDACGLTVDHPIMATTEFWTSHECLLLPYEQALTREDSTSGLFYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSQKMDPNELVNLIEILNPTNKPGRITVIVRMGAENMRVKLPHLIRAVRGAGQIVTWVCDPMHGNTIKAPCGLKTRAFDAILAEVRAFYDV 429
[Close]
BLAST of CX291316 vs. ExPASy Swiss-Prot
Match: AROG_SOLTU (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Solanum tuberosum GN=SHKB PE=2 SV=1)

HSP 1 Score: 322.398 bits (825), Expect = 8.270e-88
Identity = 153/176 (86.93%), Postives = 165/176 (93.75%), Query Frame = 3 
Query:    3 VDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLTRLDSTSGFYYDCSAHFLWVGERTRQLDGAHVEFLKGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITIITRMGAENMRVKLPHLIRAVRRSGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDV 530
            VDEALGFM+AAGLTVDHPIM+TT+FWTSHECLLLPYEQ+LTR DSTSG +YDCSAH +WVGERTRQLDGAHVEFL+GVANPLGIKVS KMDPNEL+KLI+ILNP NKPGRIT+I RMGAENMRVKL HL+RAVR +GQIVTWV DPMHGNTIKAPCGLKTR FDSI AEVRAFFDV
Sbjct:  263 VDEALGFMAAAGLTVDHPIMSTTDFWTSHECLLLPYEQALTREDSTSGLFYDCSAHMVWVGERTRQLDGAHVEFLRGVANPLGIKVSQKMDPNELIKLIDILNPANKPGRITVIVRMGAENMRVKLSHLVRAVRGAGQIVTWVCDPMHGNTIKAPCGLKTRAFDSILAEVRAFFDV 438
[Close]
BLAST of CX291316 vs. ExPASy Swiss-Prot
Match: AROF_ARATH (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=DHS1 PE=2 SV=2)

HSP 1 Score: 321.627 bits (823), Expect = 1.411e-87
Identity = 154/176 (87.50%), Postives = 163/176 (92.61%), Query Frame = 3 
Query:    3 VDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLTRLDSTSGFYYDCSAHFLWVGERTRQLDGAHVEFLKGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITIITRMGAENMRVKLPHLIRAVRRSGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDV 530
            VDEALGFMSA GL  DHP+MTTT+F+TSHECLLLPYEQSLTRLDSTSG YYDCSAH +W GERTRQLDGAHVEFL+G+ANPLGIKVS+KMDP ELVKL+EILNP NKPGRIT+I RMGAENMRVKLPHLIRAVRRSGQIVTWV DPMHGNTIKAPCGLKTR FDSI AEVRAF DV
Sbjct:  276 VDEALGFMSACGLGTDHPLMTTTDFYTSHECLLLPYEQSLTRLDSTSGLYYDCSAHMVWCGERTRQLDGAHVEFLRGIANPLGIKVSNKMDPFELVKLVEILNPNNKPGRITVIVRMGAENMRVKLPHLIRAVRRSGQIVTWVCDPMHGNTIKAPCGLKTRAFDSILAEVRAFLDV 451
[Close]
BLAST of CX291316 vs. ExPASy Swiss-Prot
Match: AROF_SOLLC (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 321.242 bits (822), Expect = 1.842e-87
Identity = 152/176 (86.36%), Postives = 165/176 (93.75%), Query Frame = 3 
Query:    3 VDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLTRLDSTSGFYYDCSAHFLWVGERTRQLDGAHVEFLKGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITIITRMGAENMRVKLPHLIRAVRRSGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDV 530
            VDEALGFM+AAGLTVDHPIM+TT+FWTSHECLLLPYEQ+LTR DSTSG +YDCSAH +WVGERTRQLDGAHVEFL+GVANPLGIKVS KMDP EL+KLI+ILNP NKPGRIT+I RMGAENMRVKL HL+RAVR +GQIVTWV DPMHGNTIKAPCGLKTR FDSI+AEVRAFFDV
Sbjct:  263 VDEALGFMAAAGLTVDHPIMSTTDFWTSHECLLLPYEQALTREDSTSGLFYDCSAHMVWVGERTRQLDGAHVEFLRGVANPLGIKVSQKMDPKELIKLIDILNPANKPGRITVIVRMGAENMRVKLSHLVRAVRGAGQIVTWVCDPMHGNTIKAPCGLKTRAFDSIQAEVRAFFDV 438
[Close]
BLAST of CX291316 vs. ExPASy Swiss-Prot
Match: AROG_ARATH (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=DHS2 PE=2 SV=2)

HSP 1 Score: 318.546 bits (815), Expect = 1.194e-86
Identity = 155/176 (88.07%), Postives = 164/176 (93.18%), Query Frame = 3 
Query:    3 VDEALGFMSAAGLTVDHPIMTTTEFWTSHECLLLPYEQSLTRLDSTSGFYYDCSAHFLWVGERTRQLDGAHVEFLKGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITIITRMGAENMRVKLPHLIRAVRRSGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDV 530
            VDEALGFM AAGLT  HPIMTTTEFWTSHECLLLPYEQ+LTR DSTSG YYDCSAH LWVGERTRQLDGAHVEFL+G+ANPLGIKVSDKM P+ELVKLIEILNPQNKPGRIT+I RMGAENMRVKLP+LIRAVR +GQIVTWVSDPMHGNTI AP GLKTR FD+IRAE+RAFFDV
Sbjct:  253 VDEALGFMGAAGLTSAHPIMTTTEFWTSHECLLLPYEQALTREDSTSGLYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKVSDKMVPSELVKLIEILNPQNKPGRITVIVRMGAENMRVKLPNLIRAVRGAGQIVTWVSDPMHGNTIMAPGGLKTRSFDAIRAELRAFFDV 428
The following BLAST results are available for this feature:
BLAST of CX291316 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
AROF_TOBAC2.654e-9494.32Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROF_SOLTU5.913e-9493.75Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROG_SOLLC2.247e-9393.18Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROG_ORYSJ5.534e-9291.48Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROF_ORYSJ3.966e-9090.34Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROF_CATRO4.848e-8888.07Probable phospho-2-dehydro-3-deoxyheptonate aldola... [more]
AROG_SOLTU8.270e-8886.93Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROF_ARATH1.411e-8787.50Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROF_SOLLC1.842e-8786.36Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROG_ARATH1.194e-8688.07Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]

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Properties
Property NameValue
Genbank descriptionC03006F05SK OF2 Citrus clementina cDNA clone C03006F05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX291316 ID=CX291316; Name=CX291316; organism=Citrus clementina; type=EST; length=532bp
GGGTTGATGAGGCCCTTGGATTCATGTCTGCAGCTGGACTCACCGTTGAC
CATCCTATCATGACAACTACTGAGTTCTGGACATCCCATGAGTGCTTGCT
CTTGCCATATGAGCAATCTCTAACCCGGCTGGATTCAACTTCTGGTTTTT
ACTATGATTGCTCTGCCCATTTTCTTTGGGTTGGAGAACGTACCAGGCAG
CTGGATGGTGCACATGTTGAGTTTTTGAAAGGTGTAGCAAATCCCCTTGG
CATTAAGGTCAGTGATAAGATGGATCCTAATGAGCTAGTGAAGCTTATTG
AGATTTTGAATCCTCAGAATAAACCGGGGAGGATAACTATTATCACTAGA
ATGGGTGCTGAGAACATGAGAGTGAAGCTTCCTCATCTAATTAGGGCAGT
CCGCCGCTCTGGCCAAATTGTTACATGGGTCAGTGACCCTATGCATGGTA
ACACCATCAAGGCTCCCTGCGGCCTGAAAACTCGTCCCTTCGATTCTATC
AGGGCTGAAGTGAGAGCATTCTTTGATGTGCA
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